Bhi04M000535 (mRNA) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTTCAGATGCAGACACAATGCTCCTTTATCTTTAATCCTTTTTCATCCCGATAAAGTCCTTCTCAAATGCCCTACCCCATATATGGCGAAGCTCTTCACAATGAACAAAGGATGGGCTACTTATGGGCCACTGACGCTAAAAATGGAGAGGTGGGATGTGGAAAAACTCGGAAGAATGCGAGTAATATCTTCTTATGGAGGATGGATCAAGCTTATCCCCCAGCATTTATGGAACAAAAGGGTGTTTAAAGCGGTTGATGACATGTTTTATGGTTTTATTGACTTGGCTGATGAGAACTCAAGTCTCAATGATTGCTTGGAAGTTGCCATTAAAGCCAAAGGAAATTATTGTGGTTTCATTCTTGTCGAGCTCATAAATGGATATGAAACTTTCTTGTGCAGGTGGTAA ATGTCCTTCAGATGCAGACACAATGCTCCTTTATCTTTAATCCTTTTTCATCCCGATAAAGTCCTTCTCAAATGCCCTACCCCATATATGGCGAAGCTCTTCACAATGAACAAAGGATGGGCTACTTATGGGCCACTGACGCTAAAAATGGAGAGGTGGGATGTGGAAAAACTCGGAAGAATGCGAGTAATATCTTCTTATGGAGGATGGATCAAGCTTATCCCCCAGCATTTATGGAACAAAAGGGTGTTTAAAGCGGTTGATGACATGTTTTATGGTTTTATTGACTTGGCTGATGAGAACTCAAGTCTCAATGATTGCTTGGAAGTTGCCATTAAAGCCAAAGGAAATTATTGTGGTTTCATTCTTGTCGAGCTCATAAATGGATATGAAACTTTCTTGTGCAGGTGGTAA ATGTCCTTCAGATGCAGACACAATGCTCCTTTATCTTTAATCCTTTTTCATCCCGATAAAGTCCTTCTCAAATGCCCTACCCCATATATGGCGAAGCTCTTCACAATGAACAAAGGATGGGCTACTTATGGGCCACTGACGCTAAAAATGGAGAGGTGGGATGTGGAAAAACTCGGAAGAATGCGAGTAATATCTTCTTATGGAGGATGGATCAAGCTTATCCCCCAGCATTTATGGAACAAAAGGGTGTTTAAAGCGGTTGATGACATGTTTTATGGTTTTATTGACTTGGCTGATGAGAACTCAAGTCTCAATGATTGCTTGGAAGTTGCCATTAAAGCCAAAGGAAATTATTGTGGTTTCATTCTTGTCGAGCTCATAAATGGATATGAAACTTTCTTGTGCAGGTGGTAA MSFRCRHNAPLSLILFHPDKVLLKCPTPYMAKLFTMNKGWATYGPLTLKMERWDVEKLGRMRVISSYGGWIKLIPQHLWNKRVFKAVDDMFYGFIDLADENSSLNDCLEVAIKAKGNYCGFILVELINGYETFLCRW Homology
BLAST of Bhi04M000535 vs. ExPASy TrEMBL
Match: A0A5D3BR42 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001340 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 3.5e-28 Identity = 65/103 (63.11%), Postives = 78/103 (75.73%), Query Frame = 0
BLAST of Bhi04M000535 vs. ExPASy TrEMBL
Match: A0A6J1D6X4 (uncharacterized protein LOC111018186 OS=Momordica charantia OX=3673 GN=LOC111018186 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 8.2e-25 Identity = 55/113 (48.67%), Postives = 72/113 (63.72%), Query Frame = 0
BLAST of Bhi04M000535 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 6.3e-17 Identity = 46/109 (42.20%), Postives = 59/109 (54.13%), Query Frame = 0
BLAST of Bhi04M000535 vs. ExPASy TrEMBL
Match: A0A5A7VKI3 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00160 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 6.3e-17 Identity = 47/120 (39.17%), Postives = 67/120 (55.83%), Query Frame = 0
BLAST of Bhi04M000535 vs. ExPASy TrEMBL
Match: A0A5D3CFS8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00330 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 6.3e-17 Identity = 46/109 (42.20%), Postives = 59/109 (54.13%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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