Bhi01M002048 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi01M002048
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr1: 64921655 .. 64921852 (+)
Sequence length	198
RNA-Seq Expression	Bhi01M002048
Synteny	Bhi01M002048

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTCGAACGTCGACGAAGAAGAACCAAACGCCCAGATGGTCTGGTCGAGTCGTCAATGAACTGGAAGAAGAACGGCAACGACGAAAAACTAGAAGAAGAACGACGACACGACAGAAACCCTTGTTGCGAAATGGAAATGCCAAATGTTAAAGGTGGAGGGCAGCGCTCGACAGTGCTGAAGAAAGTAAAGTGA

mRNA sequence

ATGAATGTCGAACGTCGACGAAGAAGAACCAAACGCCCAGATGGTCTGGTCGAGTCGTCAATGAACTGGAAGAAGAACGGCAACGACGAAAAACTAGAAGAAGAACGACGACACGACAGAAACCCTTGTTGCGAAATGGAAATGCCAAATGTTAAAGGTGGAGGGCAGCGCTCGACAGTGCTGAAGAAAGTAAAGTGA

Coding sequence (CDS)

ATGAATGTCGAACGTCGACGAAGAAGAACCAAACGCCCAGATGGTCTGGTCGAGTCGTCAATGAACTGGAAGAAGAACGGCAACGACGAAAAACTAGAAGAAGAACGACGACACGACAGAAACCCTTGTTGCGAAATGGAAATGCCAAATGTTAAAGGTGGAGGGCAGCGCTCGACAGTGCTGAAGAAAGTAAAGTGA

Protein sequence

MNVERRRRRTKRPDGLVESSMNWKKNGNDEKLEEERRHDRNPCCEMEMPNVKGGGQRSTVLKKVK

Homology

The following BLAST results are available for this feature:

BLAST of Bhi01M002048 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi01M002048 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi01M002048 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi01M002048 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi01G002048	Bhi01G002048	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi01M002048.exon1	Bhi01M002048.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi01M002048	cds.Bhi01M002048	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi01M002048	Bhi01M002048-protein	polypeptide