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Tan0021885 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATTTTCTTTTTCGGGATAAGAGAAAAATAAAAATAAAAAAAAAAAAGAAAAGGCAAAGCGTCTTTGATTAGCATAGGTTTACGCTCCCACGCGCTTACTTAACGTCATTATCCACGCGCCATGTACCTTCTCTCTCTACTTTGTCCCCCTATATAAATCCCCAGTCCTTAAAGCCCCGCCAAATTGTCTCACGTTCTTTATCGCGTCTATCCGTTTCAACTTCCCAAAAAAAAAAATAAAAAGAAAATAAAAAGAACGAAACCCTAATTTCTATGGAGAATCAAATTTCCAAGAAGCGAAATCGGGACGACTTGGCCGAGTTGGCCGAGTCGGAAACCGGTTCGCCCGAGGTGAAGCGACTCAGAGATGACCTTCTCGGTTTCTTCGACGAGTCCGATCCCGAACCGGCGACTCAGGATCTCGACTCGTTGATGCGGAGTTTCGAGGAAGAAATCGCCACCGCGTCGTCGTCTCCGGTGCCGGTGGTGGATTTAACGGCGGATTCCGGCGATTCTCAGCCGGAGTTAGGTTATCTATTGGAAGCCTCCGACGACGAGCTCGGTCTTCCGCCTTCTGTTACTTCGATTAGCCAGCAGGAGTTTGAGGAATCGGCCGAGTTGGCGAGAGTTTCGACTGATTCGTCTGAAATCGGAGAGATGTGGAGGCTCGAGGATCAGATTCCGAACTACGACGCTTTTGAACTGGAAAGCGGCGATGTGTACACGGCGGAGTATGTGGGTTTTGATGGACTGTTTGAGTATTCGAATCTGTGTTTGGATGCGTCGGAGAACTCGGATTTTCTTTGGCGGCAAGAATCTCTGCCGGCACAGTAGGTAGAAACGTCGCCGATTTGTAAATGTTCTTTCGTTGATGGAAAAGACCATAGAACTAGACTGATACAGATGCCGCAGATTATAGAAATTGGTTCGTTTTTTCTTTCTTTCAATACACAGGATTACGCAAATTACATGATTTTATACAGTGGAATTATGCGGCTTTCGTTTTTTTTTCTCTATTTTATCGAGATTTAAAATCTTGAAAACGTATATTGCGATATTCTCCGTCCGGCGATGTGTGTGTGCGGCTTTTTTTTTTTTTTTTGGAATAGAATGAGGAATGAACCAAATAAAGATTTAGGCACCAAACGTTTTACTTTCACAGAATATTGCTAAAAAAAATGATATCGAATCAACCAATACGATTGTTCGATTTAGAATTTGACAAAATAAAGGTGGAATTTTGGAAATGTTTCATTAATCTTTTCGAAGCCTACAACTACAATCCCATTGGAATCTTCCTTTTTTTCTTACTTTCAAGTAAATTCTTTTTACCGGTTACCTCTTTTTTAATTTTTACAGTTCATACGCCTCTTTCTTTCTCTACGTATCTATTTACGCAATTCTTTTGCTTTATTTATTTGTTGTGGGATTCTCCGAAAGTGTCAAAGTTTAAATGAGACCTCGCCATGGATTTAGACAAGTGTAGAAATGATATCCTTGAAGTTGTAAATATTGCAAATTTTACTTTTTTAATAGACATTTAGGGTCTGTTTGGCCCACTGGTTGGTTATTA CAATTTTCTTTTTCGGGATAAGAGAAAAATAAAAATAAAAAAAAAAAAGAAAAGGCAAAGCGTCTTTGATTAGCATAGGTTTACGCTCCCACGCGCTTACTTAACGTCATTATCCACGCGCCATGTACCTTCTCTCTCTACTTTGTCCCCCTATATAAATCCCCAGTCCTTAAAGCCCCGCCAAATTGTCTCACGTTCTTTATCGCGTCTATCCGTTTCAACTTCCCAAAAAAAAAAATAAAAAGAAAATAAAAAGAACGAAACCCTAATTTCTATGGAGAATCAAATTTCCAAGAAGCGAAATCGGGACGACTTGGCCGAGTTGGCCGAGTCGGAAACCGGTTCGCCCGAGGTGAAGCGACTCAGAGATGACCTTCTCGGTTTCTTCGACGAGTCCGATCCCGAACCGGCGACTCAGGATCTCGACTCGTTGATGCGGAGTTTCGAGGAAGAAATCGCCACCGCGTCGTCGTCTCCGGTGCCGGTGGTGGATTTAACGGCGGATTCCGGCGATTCTCAGCCGGAGTTAGGTTATCTATTGGAAGCCTCCGACGACGAGCTCGGTCTTCCGCCTTCTGTTACTTCGATTAGCCAGCAGGAGTTTGAGGAATCGGCCGAGTTGGCGAGAGTTTCGACTGATTCGTCTGAAATCGGAGAGATGTGGAGGCTCGAGGATCAGATTCCGAACTACGACGCTTTTGAACTGGAAAGCGGCGATGTGTACACGGCGGAGTATGTGGGTTTTGATGGACTGTTTGAGTATTCGAATCTGTGTTTGGATGCGTCGGAGAACTCGGATTTTCTTTGGCGGCAAGAATCTCTGCCGGCACAGTAGGTAGAAACGTCGCCGATTTGTAAATGTTCTTTCGTTGATGGAAAAGACCATAGAACTAGACTGATACAGATGCCGCAGATTATAGAAATTGGTTCGTTTTTTCTTTCTTTCAATACACAGGATTACGCAAATTACATGATTTTATACAGTGGAATTATGCGGCTTTCGTTTTTTTTTCTCTATTTTATCGAGATTTAAAATCTTGAAAACGTATATTGCGATATTCTCCGTCCGGCGATGTGTGTGTGCGGCTTTTTTTTTTTTTTTTGGAATAGAATGAGGAATGAACCAAATAAAGATTTAGGCACCAAACGTTTTACTTTCACAGAATATTGCTAAAAAAAATGATATCGAATCAACCAATACGATTGTTCGATTTAGAATTTGACAAAATAAAGGTGGAATTTTGGAAATGTTTCATTAATCTTTTCGAAGCCTACAACTACAATCCCATTGGAATCTTCCTTTTTTTCTTACTTTCAAGTAAATTCTTTTTACCGGTTACCTCTTTTTTAATTTTTACAGTTCATACGCCTCTTTCTTTCTCTACGTATCTATTTACGCAATTCTTTTGCTTTATTTATTTGTTGTGGGATTCTCCGAAAGTGTCAAAGTTTAAATGAGACCTCGCCATGGATTTAGACAAGTGTAGAAATGATATCCTTGAAGTTGTAAATATTGCAAATTTTACTTTTTTAATAGACATTTAGGGTCTGTTTGGCCCACTGGTTGGTTATTA ATGGAGAATCAAATTTCCAAGAAGCGAAATCGGGACGACTTGGCCGAGTTGGCCGAGTCGGAAACCGGTTCGCCCGAGGTGAAGCGACTCAGAGATGACCTTCTCGGTTTCTTCGACGAGTCCGATCCCGAACCGGCGACTCAGGATCTCGACTCGTTGATGCGGAGTTTCGAGGAAGAAATCGCCACCGCGTCGTCGTCTCCGGTGCCGGTGGTGGATTTAACGGCGGATTCCGGCGATTCTCAGCCGGAGTTAGGTTATCTATTGGAAGCCTCCGACGACGAGCTCGGTCTTCCGCCTTCTGTTACTTCGATTAGCCAGCAGGAGTTTGAGGAATCGGCCGAGTTGGCGAGAGTTTCGACTGATTCGTCTGAAATCGGAGAGATGTGGAGGCTCGAGGATCAGATTCCGAACTACGACGCTTTTGAACTGGAAAGCGGCGATGTGTACACGGCGGAGTATGTGGGTTTTGATGGACTGTTTGAGTATTCGAATCTGTGTTTGGATGCGTCGGAGAACTCGGATTTTCTTTGGCGGCAAGAATCTCTGCCGGCACAGTAG MENQISKKRNRDDLAELAESETGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATASSSPVPVVDLTADSGDSQPELGYLLEASDDELGLPPSVTSISQQEFEESAELARVSTDSSEIGEMWRLEDQIPNYDAFELESGDVYTAEYVGFDGLFEYSNLCLDASENSDFLWRQESLPAQ Homology
BLAST of Tan0021885 vs. NCBI nr
Match: KAG7013029.1 (hypothetical protein SDJN02_25785, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 325.1 bits (832), Expect = 4.0e-85 Identity = 168/190 (88.42%), Postives = 175/190 (92.11%), Query Frame = 0
BLAST of Tan0021885 vs. NCBI nr
Match: KAG6573972.1 (hypothetical protein SDJN03_27859, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 324.3 bits (830), Expect = 6.8e-85 Identity = 168/190 (88.42%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of Tan0021885 vs. NCBI nr
Match: XP_023542043.1 (uncharacterized protein LOC111802016 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 322.8 bits (826), Expect = 2.0e-84 Identity = 167/190 (87.89%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of Tan0021885 vs. NCBI nr
Match: XP_022945766.1 (uncharacterized protein LOC111449910 [Cucurbita moschata]) HSP 1 Score: 322.0 bits (824), Expect = 3.4e-84 Identity = 167/190 (87.89%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of Tan0021885 vs. NCBI nr
Match: XP_022967994.1 (uncharacterized protein LOC111467364 [Cucurbita maxima]) HSP 1 Score: 322.0 bits (824), Expect = 3.4e-84 Identity = 166/190 (87.37%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of Tan0021885 vs. ExPASy TrEMBL
Match: A0A6J1HYB6 (uncharacterized protein LOC111467364 OS=Cucurbita maxima OX=3661 GN=LOC111467364 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 1.6e-84 Identity = 166/190 (87.37%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of Tan0021885 vs. ExPASy TrEMBL
Match: A0A6J1G1T4 (uncharacterized protein LOC111449910 OS=Cucurbita moschata OX=3662 GN=LOC111449910 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 1.6e-84 Identity = 167/190 (87.89%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of Tan0021885 vs. ExPASy TrEMBL
Match: A0A5A7SV83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00920 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 1.1e-75 Identity = 159/190 (83.68%), Postives = 166/190 (87.37%), Query Frame = 0
BLAST of Tan0021885 vs. ExPASy TrEMBL
Match: A0A1S3BEX2 (uncharacterized protein LOC103489276 OS=Cucumis melo OX=3656 GN=LOC103489276 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 1.1e-75 Identity = 159/190 (83.68%), Postives = 166/190 (87.37%), Query Frame = 0
BLAST of Tan0021885 vs. ExPASy TrEMBL
Match: A0A6J1JH49 (uncharacterized protein LOC111484295 OS=Cucurbita maxima OX=3661 GN=LOC111484295 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 2.4e-75 Identity = 152/189 (80.42%), Postives = 167/189 (88.36%), Query Frame = 0
BLAST of Tan0021885 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 151.4 bits (381), Expect = 7.3e-37 Identity = 88/186 (47.31%), Postives = 122/186 (65.59%), Query Frame = 0
BLAST of Tan0021885 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 129.0 bits (323), Expect = 3.9e-30 Identity = 76/164 (46.34%), Postives = 106/164 (64.63%), Query Frame = 0
BLAST of Tan0021885 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 129.0 bits (323), Expect = 3.9e-30 Identity = 76/167 (45.51%), Postives = 107/167 (64.07%), Query Frame = 0
BLAST of Tan0021885 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 123.2 bits (308), Expect = 2.1e-28 Identity = 82/188 (43.62%), Postives = 113/188 (60.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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