Tan0021451 (gene) Snake gourd v1

Overview


Name	Tan0021451
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Retrotransposon protein
Location	LG11: 47665550 .. 47666317 (-)
RNA-Seq Expression	Tan0021451
Synteny	Tan0021451

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGATTGCGGAGATGTTAGGACCTGCATGTAGTGGATTCGGATGGAACGAGGAGCGTAAATGCGTGGAGGCCGAGAAAGACATATTCGATACATGGGTGATGGTAATGAAGTCAAAATATAATTTTTTATTTTAAAATCTCGACATGTCACTGTAAAATGAATCTGATGCATATTATTTATGATGCAGTCTCATCCACATGCAAAAGGTCTTCGAAATAGGCCATTCCCATTGTTCAACGATCTAGCAGTCATATTTGGAAAAGATAGAGCAACAGGTGCCGGTGCACAATCTCCATCCGACATGGCATCAGATGCTGCAACTGACTTAGAGGATGATCTAAACCCTGATTTTCCCGATTCATTCCTCCGTGATCCACCGCCAGTGGATGTATCGATGGGCGAGGACACATCAGCCACACCTACGAGTCGAACACAAGAAGTCGGATCATCCAGACCGACTAGGAGGAGACGTCTGTCCTCGGGGTCAAATATGGCAGACATCATGAGTCAGGGTTTTCAATTGACAGCCGAACAGATTGGAAAGATTGCAGCCTGGCTGTCGGAGAAGGATAGAATTGAAAGAGCTCGAGTGAACGAGCTATATGCAGAGTTGAAAGCAATCCCAGGGATGACAAGACAAGATTGCATGATGGTTGCAAAGACGCTTCTCTCGGATAGTATGATGTTGAACTCTTTCTTTGCTTGGACCCCAGATTGGAAGTATGATTATTGTGTGGAAGTTCTGGGGAAAGCACCGGGAACCTGA

mRNA sequence

CGCGATTGCGGAGATGTTAGGACCTGCATGTAGTGGATTCGGATGGAACGAGGAGCGTAAATGCGTGGAGGCCGAGAAAGACATATTCGATACATGGGTGATGTCTCATCCACATGCAAAAGGTCTTCGAAATAGGCCATTCCCATTGTTCAACGATCTAGCAGTCATATTTGGAAAAGATAGAGCAACAGGTGCCGGTGCACAATCTCCATCCGACATGGCATCAGATGCTGCAACTGACTTAGAGGATGATCTAAACCCTGATTTTCCCGATTCATTCCTCCGTGATCCACCGCCAGTGGATGTATCGATGGGCGAGGACACATCAGCCACACCTACGAGTCGAACACAAGAAGTCGGATCATCCAGACCGACTAGGAGGAGACGTCTGTCCTCGGGGTCAAATATGGCAGACATCATGAGTCAGGGTTTTCAATTGACAGCCGAACAGATTGGAAAGATTGCAGCCTGGCTGTCGGAGAAGGATAGAATTGAAAGAGCTCGAGTGAACGAGCTATATGCAGAGTTGAAAGCAATCCCAGGGATGACAAGACAAGATTGCATGATGGTTGCAAAGACGCTTCTCTCGGATAGTATGATGTTGAACTCTTTCTTTGCTTGGACCCCAGATTGGAAGTATGATTATTGTGTGGAAGTTCTGGGGAAAGCACCGGGAACCTGA

Coding sequence (CDS)

ATGTTAGGACCTGCATGTAGTGGATTCGGATGGAACGAGGAGCGTAAATGCGTGGAGGCCGAGAAAGACATATTCGATACATGGGTGATGTCTCATCCACATGCAAAAGGTCTTCGAAATAGGCCATTCCCATTGTTCAACGATCTAGCAGTCATATTTGGAAAAGATAGAGCAACAGGTGCCGGTGCACAATCTCCATCCGACATGGCATCAGATGCTGCAACTGACTTAGAGGATGATCTAAACCCTGATTTTCCCGATTCATTCCTCCGTGATCCACCGCCAGTGGATGTATCGATGGGCGAGGACACATCAGCCACACCTACGAGTCGAACACAAGAAGTCGGATCATCCAGACCGACTAGGAGGAGACGTCTGTCCTCGGGGTCAAATATGGCAGACATCATGAGTCAGGGTTTTCAATTGACAGCCGAACAGATTGGAAAGATTGCAGCCTGGCTGTCGGAGAAGGATAGAATTGAAAGAGCTCGAGTGAACGAGCTATATGCAGAGTTGAAAGCAATCCCAGGGATGACAAGACAAGATTGCATGATGGTTGCAAAGACGCTTCTCTCGGATAGTATGATGTTGAACTCTTTCTTTGCTTGGACCCCAGATTGGAAGTATGATTATTGTGTGGAAGTTCTGGGGAAAGCACCGGGAACCTGA

Protein sequence

MLGPACSGFGWNEERKCVEAEKDIFDTWVMSHPHAKGLRNRPFPLFNDLAVIFGKDRATGAGAQSPSDMASDAATDLEDDLNPDFPDSFLRDPPPVDVSMGEDTSATPTSRTQEVGSSRPTRRRRLSSGSNMADIMSQGFQLTAEQIGKIAAWLSEKDRIERARVNELYAELKAIPGMTRQDCMMVAKTLLSDSMMLNSFFAWTPDWKYDYCVEVLGKAPGT

Homology

[Close]

BLAST of Tan0021451 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 199.1 bits (505), Expect = 3.9e-47
Identity = 99/201 (49.25%), Postives = 138/201 (68.66%), Query Frame = 0


Query: 1   MLGPACSGFGWNEERKCVEAEKDIFDTWVMSHPHAKGLRNRPFPLFNDLAVIFGKDRATG 60
           M+GPACSGFGWNE +KC+E EK +FD WV  HP+A+GL N+PFP F DL V+FG+DRATG
Sbjct: 192 MMGPACSGFGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATG 251

Query: 61  AGAQSPSDMASDAATDL-EDDLNPDFPDSFLRDPPPVDVSMGEDTSATPTSRTQEVGSSR 120
              ++P +M+S  A D  EDD++ +  D  + +P  ++   GED  +TPTS T + GSSR
Sbjct: 252 GRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSR 311

Query: 121 PTRRRRLSSGSNMADIMSQGFQLTAEQIGKIAAWLSEKDRIERARVNELYAELKAIPGMT 180
           P+++RR  SG ++ D      + T+++IGKIA W  EK  IE +    LYAEL+ IPGM 
Sbjct: 312 PSKKRRSYSG-DLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGMD 371

Query: 181 RQDCMMVAKTLLSDSMMLNSF 201
             DC++VA++LL D  ML++F
Sbjct: 372 VDDCLIVAESLLPDPTMLHAF 391

[Close]

BLAST of Tan0021451 vs. NCBI nr
Match: KAA0067273.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 188.7 bits (478), Expect = 5.3e-44
Identity = 94/201 (46.77%), Postives = 136/201 (67.66%), Query Frame = 0


Query: 1   MLGPACSGFGWNEERKCVEAEKDIFDTWVMSHPHAKGLRNRPFPLFNDLAVIFGKDRATG 60
           M+GPACS FGWNEE+KC+EA+K +FD WV  HP+A+GL N+ FP F DL ++FG+DRATG
Sbjct: 1   MMGPACSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATG 60

Query: 61  AGAQSPSDMASDAATDL-EDDLNPDFPDSFLRDPPPVDVSMGEDTSATPTSRTQEVGSSR 120
              ++P +M    A D  EDD++ +  D  + +P  ++   GED S+TPTS   +VGSS+
Sbjct: 61  GRCKTPIEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSK 120

Query: 121 PTRRRRLSSGSNMADIMSQGFQLTAEQIGKIAAWLSEKDRIERARVNELYAELKAIPGMT 180
           P+++RR S   ++ D      + T+++I KIAAW  EK  IE +    LYAEL+ IPGM 
Sbjct: 121 PSKKRR-SYSEDLMDTFRASMRETSKEIRKIAAWQREKMEIESSIHKRLYAELQTIPGMD 180

Query: 181 RQDCMMVAKTLLSDSMMLNSF 201
             DC++V ++LL D +ML++F
Sbjct: 181 VDDCLIVVESLLPDPIMLHTF 200

[Close]

BLAST of Tan0021451 vs. NCBI nr
Match: TYK10886.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 188.0 bits (476), Expect = 9.0e-44
Identity = 94/201 (46.77%), Postives = 135/201 (67.16%), Query Frame = 0


Query: 1   MLGPACSGFGWNEERKCVEAEKDIFDTWVMSHPHAKGLRNRPFPLFNDLAVIFGKDRATG 60
           M+GPACS FGWNEE+KC+EA+K +FD WV  HP+A+GL N+ FP F DL ++FG+DRATG
Sbjct: 1   MMGPACSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATG 60

Query: 61  AGAQSPSDMASDAATDL-EDDLNPDFPDSFLRDPPPVDVSMGEDTSATPTSRTQEVGSSR 120
              ++P +M    A D  EDD++ +  D  + +P  ++   GED S+TPTS   +VGSSR
Sbjct: 61  GRCKTPVEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYDVGSSR 120

Query: 121 PTRRRRLSSGSNMADIMSQGFQLTAEQIGKIAAWLSEKDRIERARVNELYAELKAIPGMT 180
           P+++RR S   ++ D      + T+++I KI AW  EK  IE +    LYAEL+ IPGM 
Sbjct: 121 PSKKRR-SYSEDLMDTFCASMRETSKEIRKITAWQREKMEIESSIHKRLYAELQTIPGMD 180

Query: 181 RQDCMMVAKTLLSDSMMLNSF 201
             DC++V ++LL D +ML++F
Sbjct: 181 VDDCLIVVESLLPDPIMLHTF 200

[Close]

BLAST of Tan0021451 vs. NCBI nr
Match: XP_008460440.1 (PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo])

HSP 1 Score: 186.4 bits (472), Expect = 2.6e-43
Identity = 93/200 (46.50%), Postives = 135/200 (67.50%), Query Frame = 0


Query: 2   LGPACSGFGWNEERKCVEAEKDIFDTWVMSHPHAKGLRNRPFPLFNDLAVIFGKDRATGA 61
           +GPACS FGWNEE+KC+EA+K +FD WV  HP+A+GL N+ FP F DL ++FG+DRATG 
Sbjct: 1   MGPACSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGG 60

Query: 62  GAQSPSDMASDAATDL-EDDLNPDFPDSFLRDPPPVDVSMGEDTSATPTSRTQEVGSSRP 121
             ++P +M    A D  EDD++ +  D  + +P  ++   GED S+TPTS   +VGSS+P
Sbjct: 61  RCKTPIEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSKP 120

Query: 122 TRRRRLSSGSNMADIMSQGFQLTAEQIGKIAAWLSEKDRIERARVNELYAELKAIPGMTR 181
           +++RR S   ++ D      + T+++I KIAAW  EK  IE +    LYAEL+ IPGM  
Sbjct: 121 SKKRR-SYSEDLMDTFRASMRETSKEIRKIAAWQREKMEIESSIHKRLYAELQTIPGMDV 180

Query: 182 QDCMMVAKTLLSDSMMLNSF 201
            DC++V ++LL D +ML++F
Sbjct: 181 DDCLIVVESLLPDPIMLHTF 199

[Close]

BLAST of Tan0021451 vs. NCBI nr
Match: XP_022158565.1 (uncharacterized protein LOC111025018 [Momordica charantia])

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-33
Identity = 82/215 (38.14%), Postives = 129/215 (60.00%), Query Frame = 0


Query: 8   GFGWNEERKCVEAEKDIFDTWVMSHPHAKGLRNRPFPLFNDLAVIFGKDRATGAGAQSPS 67
           GFGWN++ KC+EAEK++FD WV SHP+AKGLRN+P P ++DL V FGKDRATGA    P 
Sbjct: 4   GFGWNDDHKCIEAEKEVFDDWVKSHPNAKGLRNKP-PHYDDLTVAFGKDRATGANLDCPV 63

Query: 68  DMASDAATDLEDDLNPDFPDSFLRDPP---PVDVSMGEDTSATPTSRTQEVGSSRPTRRR 127
           DMAS AA  + +D + +  D ++ DPP     + ++ ED   TPTS+     SS  ++R+
Sbjct: 64  DMASSAAATIAEDAHFEAQDFYIPDPPMFNTTEDAIEEDLPNTPTSKPTIGTSSGGSKRK 123

Query: 128 RLSSGSNMADIMSQGFQLTAEQIGKIAAWLSEKDRIERARVNELYAELKAIPGMTRQDCM 187
           R    S M D++    ++    + K+A W  +K+  + AR   ++ +LK IP +   D +
Sbjct: 124 RSGYTSEMVDVVRTNMRMQTAHLEKMATWPDKKEEKKIARRKIVHDQLKQIPNLEANDYV 183

Query: 188 MVAKTLLSDSMMLNSFFAWTPDWKYDYCVEVLGKA 220
            +   L+++     SF     ++K  +C+++LGK+
Sbjct: 184 RLVGILMTNVKKSISFLEVPIEFKKMFCMQLLGKS 217

[Close]

BLAST of Tan0021451 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.9e-47
Identity = 99/201 (49.25%), Postives = 138/201 (68.66%), Query Frame = 0


Query: 1   MLGPACSGFGWNEERKCVEAEKDIFDTWVMSHPHAKGLRNRPFPLFNDLAVIFGKDRATG 60
           M+GPACSGFGWNE +KC+E EK +FD WV  HP+A+GL N+PFP F DL V+FG+DRATG
Sbjct: 192 MMGPACSGFGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATG 251

Query: 61  AGAQSPSDMASDAATDL-EDDLNPDFPDSFLRDPPPVDVSMGEDTSATPTSRTQEVGSSR 120
              ++P +M+S  A D  EDD++ +  D  + +P  ++   GED  +TPTS T + GSSR
Sbjct: 252 GRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSR 311

Query: 121 PTRRRRLSSGSNMADIMSQGFQLTAEQIGKIAAWLSEKDRIERARVNELYAELKAIPGMT 180
           P+++RR  SG ++ D      + T+++IGKIA W  EK  IE +    LYAEL+ IPGM 
Sbjct: 312 PSKKRRSYSG-DLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGMD 371

Query: 181 RQDCMMVAKTLLSDSMMLNSF 201
             DC++VA++LL D  ML++F
Sbjct: 372 VDDCLIVAESLLPDPTMLHAF 391

[Close]

BLAST of Tan0021451 vs. ExPASy TrEMBL
Match: A0A5A7VGQ0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00930 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 2.6e-44
Identity = 94/201 (46.77%), Postives = 136/201 (67.66%), Query Frame = 0


Query: 1   MLGPACSGFGWNEERKCVEAEKDIFDTWVMSHPHAKGLRNRPFPLFNDLAVIFGKDRATG 60
           M+GPACS FGWNEE+KC+EA+K +FD WV  HP+A+GL N+ FP F DL ++FG+DRATG
Sbjct: 1   MMGPACSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATG 60

Query: 61  AGAQSPSDMASDAATDL-EDDLNPDFPDSFLRDPPPVDVSMGEDTSATPTSRTQEVGSSR 120
              ++P +M    A D  EDD++ +  D  + +P  ++   GED S+TPTS   +VGSS+
Sbjct: 61  GRCKTPIEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSK 120

Query: 121 PTRRRRLSSGSNMADIMSQGFQLTAEQIGKIAAWLSEKDRIERARVNELYAELKAIPGMT 180
           P+++RR S   ++ D      + T+++I KIAAW  EK  IE +    LYAEL+ IPGM 
Sbjct: 121 PSKKRR-SYSEDLMDTFRASMRETSKEIRKIAAWQREKMEIESSIHKRLYAELQTIPGMD 180

Query: 181 RQDCMMVAKTLLSDSMMLNSF 201
             DC++V ++LL D +ML++F
Sbjct: 181 VDDCLIVVESLLPDPIMLHTF 200

[Close]

BLAST of Tan0021451 vs. ExPASy TrEMBL
Match: A0A5D3CKC1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00580 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 4.4e-44
Identity = 94/201 (46.77%), Postives = 135/201 (67.16%), Query Frame = 0


Query: 1   MLGPACSGFGWNEERKCVEAEKDIFDTWVMSHPHAKGLRNRPFPLFNDLAVIFGKDRATG 60
           M+GPACS FGWNEE+KC+EA+K +FD WV  HP+A+GL N+ FP F DL ++FG+DRATG
Sbjct: 1   MMGPACSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATG 60

Query: 61  AGAQSPSDMASDAATDL-EDDLNPDFPDSFLRDPPPVDVSMGEDTSATPTSRTQEVGSSR 120
              ++P +M    A D  EDD++ +  D  + +P  ++   GED S+TPTS   +VGSSR
Sbjct: 61  GRCKTPVEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAYDVGSSR 120

Query: 121 PTRRRRLSSGSNMADIMSQGFQLTAEQIGKIAAWLSEKDRIERARVNELYAELKAIPGMT 180
           P+++RR S   ++ D      + T+++I KI AW  EK  IE +    LYAEL+ IPGM 
Sbjct: 121 PSKKRR-SYSEDLMDTFCASMRETSKEIRKITAWQREKMEIESSIHKRLYAELQTIPGMD 180

Query: 181 RQDCMMVAKTLLSDSMMLNSF 201
             DC++V ++LL D +ML++F
Sbjct: 181 VDDCLIVVESLLPDPIMLHTF 200

[Close]

BLAST of Tan0021451 vs. ExPASy TrEMBL
Match: A0A1S3CC17 (uncharacterized protein LOC103499248 OS=Cucumis melo OX=3656 GN=LOC103499248 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-43
Identity = 93/200 (46.50%), Postives = 135/200 (67.50%), Query Frame = 0


Query: 2   LGPACSGFGWNEERKCVEAEKDIFDTWVMSHPHAKGLRNRPFPLFNDLAVIFGKDRATGA 61
           +GPACS FGWNEE+KC+EA+K +FD WV  HP+A+GL N+ FP F DL ++FG+DRATG 
Sbjct: 1   MGPACSRFGWNEEQKCIEAQKSVFDDWVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGG 60

Query: 62  GAQSPSDMASDAATDL-EDDLNPDFPDSFLRDPPPVDVSMGEDTSATPTSRTQEVGSSRP 121
             ++P +M    A D  EDD++ +  D  + +P  ++   GED S+TPTS   +VGSS+P
Sbjct: 61  RCKTPIEMGLQIARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSKP 120

Query: 122 TRRRRLSSGSNMADIMSQGFQLTAEQIGKIAAWLSEKDRIERARVNELYAELKAIPGMTR 181
           +++RR S   ++ D      + T+++I KIAAW  EK  IE +    LYAEL+ IPGM  
Sbjct: 121 SKKRR-SYSEDLMDTFRASMRETSKEIRKIAAWQREKMEIESSIHKRLYAELQTIPGMDV 180

Query: 182 QDCMMVAKTLLSDSMMLNSF 201
            DC++V ++LL D +ML++F
Sbjct: 181 DDCLIVVESLLPDPIMLHTF 199

[Close]

BLAST of Tan0021451 vs. ExPASy TrEMBL
Match: A0A6J1DW73 (uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025018 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 5.4e-34
Identity = 82/215 (38.14%), Postives = 129/215 (60.00%), Query Frame = 0


Query: 8   GFGWNEERKCVEAEKDIFDTWVMSHPHAKGLRNRPFPLFNDLAVIFGKDRATGAGAQSPS 67
           GFGWN++ KC+EAEK++FD WV SHP+AKGLRN+P P ++DL V FGKDRATGA    P 
Sbjct: 4   GFGWNDDHKCIEAEKEVFDDWVKSHPNAKGLRNKP-PHYDDLTVAFGKDRATGANLDCPV 63

Query: 68  DMASDAATDLEDDLNPDFPDSFLRDPP---PVDVSMGEDTSATPTSRTQEVGSSRPTRRR 127
           DMAS AA  + +D + +  D ++ DPP     + ++ ED   TPTS+     SS  ++R+
Sbjct: 64  DMASSAAATIAEDAHFEAQDFYIPDPPMFNTTEDAIEEDLPNTPTSKPTIGTSSGGSKRK 123

Query: 128 RLSSGSNMADIMSQGFQLTAEQIGKIAAWLSEKDRIERARVNELYAELKAIPGMTRQDCM 187
           R    S M D++    ++    + K+A W  +K+  + AR   ++ +LK IP +   D +
Sbjct: 124 RSGYTSEMVDVVRTNMRMQTAHLEKMATWPDKKEEKKIARRKIVHDQLKQIPNLEANDYV 183

Query: 188 MVAKTLLSDSMMLNSFFAWTPDWKYDYCVEVLGKA 220
            +   L+++     SF     ++K  +C+++LGK+
Sbjct: 184 RLVGILMTNVKKSISFLEVPIEFKKMFCMQLLGKS 217

[Close]

BLAST of Tan0021451 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 3.2e-07
Identity = 20/54 (37.04%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 7   SGFGWNEERKCVEAEKDIFDTWVMSHPHAKGLRNRPFPLFNDLAVIFGKDRATG 61
           +GF W+  R  V A+ DI++T++ +HP A+  R +  P + +L  IFGK+ + G
Sbjct: 399 NGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKTIPSYPNLCFIFGKETSDG 452

The following BLAST results are available for this feature:

BLAST of Tan0021451 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0021451 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07921.1	3.9e-47	49.25	hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]	[more]
KAA0067273.1	5.3e-44	46.77	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK10886.1	9.0e-44	46.77	retrotransposon protein [Cucumis melo var. makuwa]	[more]
XP_008460440.1	2.6e-43	46.50	PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]	[more]
XP_022158565.1	1.1e-33	38.14	uncharacterized protein LOC111025018 [Momordica charantia]	[more]

BLAST of Tan0021451 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C7T4	1.9e-47	49.25	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VGQ0	2.6e-44	46.77	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CKC1	4.4e-44	46.77	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CC17	1.3e-43	46.50	uncharacterized protein LOC103499248 OS=Cucumis melo OX=3656 GN=LOC103499248 PE=...	[more]
A0A6J1DW73	5.4e-34	38.14	uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Tan0021451 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24960.2	3.2e-07	37.04	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..130
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 1..212
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 1..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0021451.1	Tan0021451.1	mRNA