Tan0018084 (gene) Snake gourd v1

Overview
NameTan0018084
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionBromo domain-containing protein
LocationLG07: 69373509 .. 69378007 (+)
RNA-Seq ExpressionTan0018084
SyntenyTan0018084
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCAATCGCTTCATCCTCTTCAGCCGCCCTCCTTCGTTTCGAACCCAGTTTCGCGCCCCAGTGCAACTTGCCCATCGACCACACAACAGCCAGCCGATACGTTCCGGTCTGACCAACGTAACCTCGCAGATCTTTTCATCACCCGTCGCCAGCCTTCAGCCGGAGTTTCGTCCGAACCGTCCGCGACCATGACCACACGCAGGAGTCTCGATCGCCGTCACGCTCGCAGTCGCGACCCACTGTTGACCAACCGAGCTTCACCGAAATGACTTGTTAAAGCTTATGGCTAGAGAAATACATATGGCTAGAGAAATACCTATACAAGAAAGTCAGTGTGAAAGAGGTACGAAAATGACTCTAATGTTCTTGATTGCTCTCATCTTCTTAACTCGCATATAGACTCTATGTCCACTTTCTTTGTTTGAATGTCTTGATGTACCGAAATGACTTGTTAAAGCTTAATTTCGTGTGTTGTGATGGGCATTGATGTTCGTGAATGTTTCTTTCAGTTCTCTTCTGACGATTCCGACCAGTGTGGAATATGAACAAAATCCATTGAGTTACTGCTACGAAATCGAAGACTCTGTGCAGCACTTGAAGAAGTGCATAGTTGAGGTTCGTTGTTTTTATTATGAGCCATGTTTGAAAATGGAAGAAGAAATTGAAGCCAAACATTTGCTTGTTTTACTCTCATCTGTAATTGCTTCTGTTTTCAGGTGACAAATATGCCATGGGGTGAGAGAGTCTCATTTGTTTTCAATCCAAATTCTGATTTAGTAGCTAAGTCGTTGCATGTCAGTCCTTTTATGGTAAGTCTTATTGATTTGGTTCGCTTTTGATGGTAGAGTTGTTGATAATTCTCGTCTCTGATGGATGCTATTTCCAATTTGATTGGACATAAAGTTATTTTGAGATTCCTTATATTCTCATTTATTTACGTATTCCTAGCAAATCATTTGGTTTTCCTGGTTGGATCTTTTATTAATAATTAGTTTGAAATCTGCCTCAGATCTTTTTTAGTAAGAAATATATTTTTCCCTAGGTAAGTGAAAAATCTTGATCTCATTTATTATTCACAAATAAAGAGGATAGGAGTTTCTTACTTGAGAATAAATAATACTAAAAGTTACACAAGGCTAGAGAAATACTTATACAATAATGAGAAATTATGGCAAGAGAAGTACTTCTACAAGAAATTCAGTGTGAAAGAGGTTGGTAAGCAAAGATGCATAGAGAAACGTTGGGAAGAGAGTATATAGAGCGAGAAGTGTGTCTAGAGAATAATTTGGAAAAGAGAGCAAATCAACTAAGGATGAAGTGTTTGAACCAAAATTTCAAAGGCTAACCGATGCAGAAAGCTTACACCTAAAAGAAATGATACCAATCAAGAGTACAATAAAAATTCTTGTCGCCATGATTATGCTTGCCAATAATATTAAGATTCAGTAGTCAAATTCTTTCCAGCCGATCTGAGATAATATTGATAAGTTTAACACAATGCACAATCACCGACCCTAAGTCCGTTACATTACAAGATAATATATAAGCATCTATACATTCCGAAGTTTTAGATCTGTCTATTTCATTTATTATAGTCAGAGAACAATTTCATTCCTAATTTAAAAGAACTAGAAATCCAAAAGCGAAACAAGTGCAAACAAAACATAACAAGAGATTTTTATGTTGATTTGGTTGATCATTCTTGCAGTGGAATTGACAACAAAAGTTTATTTTCATTACATTGTCTTTGGGAAATATCTTGGGAGTTATCAAATTAAAAAGGATGTGATCATCATCAAGCTTACTAGAATATCTTAATTTTTGTCTGCTTGAAAGAATTGATGACAAAGACCTATTGTATTATCCTTTGTGATCTAAATGCTCTTAATAACAGATGATGAATATTGCAGACCACTGTGGCCATTTGTGTTTCTTTTGAGTTAAATAGAAAGCCTCACATGTTTGACAACTAAAGTACGGGCATGGTGCCATTGGCTTTAAGAATAGAATGTGTAGTTTTTGACTATGCACATTTTCTAGTCATGTTTCTCCCTTAATCCAATTTTGACAACATAACATATGTTTCTCCTAGTTCTAGCAAGGACAATGTTCTGGGGTTATGCCATTTTTTTAATCAGTCATCTTAAAATGGAACATAGCTTTTTGTATTATAAATTTTGACATCTATATAGTTGAATCAACAGACTTGGAAAGTGCTAATTATTCTTCAGTAAAAACAAAAGTTGGGATTGCAAACTTTCTTGTTCAACTTGAGATAATTTTTACTTTGCAACTGCTGACATAAGCTTAATTTCCCTACAATTTTTACTGACTCCTTGTTTAAGTAGAGTCATGAGCACTTTTGTCTGTACGCTTAATCATTCTTTTTTACTCATCCATTTCTAGGGATCTCTTACTTTTTACAAAGAAGTGTATTGCACTCTTGCTACACATTTATAACATGGATAAGAGTTGGATGCAAATTGGAAATCGAGCATTAATGAAAGAATATAGAAATGGTGTTAGAAGTTTTCTTGATTTTGCATTTATGCATGCTACATCAGGTCAAATTTTTTGTCCATGTAAGAGATGTAATAATGTAGTACTTAAAACTCGAGATGATATTGAAGTAGATTTGTTAATGTTTGAGATAGTTCCAAGTTATACTCAATGGACAATGCATGGTGAAGAATCTACTCAAGAAAAAATGGTAAGTAGTGACACTTTTATCTTTAATATGAGAAATAATGGAATGGTTGTGTTTATGTGTTGTGTGTATTGCTATTTGCAGCACTGGCGAGGCTCTAAGCATGTTTCGTAATGAATTTTGCTTAATTCATTCATAGTTTTGAACATGTTTCTTAATGAATGGGTTGTATTAACTCATAAGCTTTATTAACCCATAAGCATGAAAACTAACATGGCAGGGAGCTTTTATCTAGATTCCAGTTTTGATCCATTAAAACTTACACATGCATTTTCATTGTTTTGGTCTGATTTACCCCAAAAAAGAGTTGAATGGAGATGAGGGTGAAACTTGTTCTGTTTTGTAGCTAGTTAGAGGTTTCTCTCTCCTCTATCTCTCTTTTTCTCTTTCTCAAGTGTGTGTTAATTCTTAAACCTTCTCTTAAATCTCTAATTTCTCTTTTTCTCTTTCTCAAGTGGGTGTTAATTCTTATACTTTCTCTTAAGACTCTAACTCCAGGATAGTAAAGGAAGGGTTGGCAAGATTTGCCTTTAATAGAGAATAGTCTCATTCTCATAAACTGCAGGTCCAGTTAGAAATTTGTTTGTGATGATTTGCTCTCAGAATGTTAATTAAGACACTGAAAGATTAACAATAGAATCCATGGGGGCAGACTTAGAGAGTTTGAGGATACATGTGACTGAACTTCTTGCCTCCTGCCATTGTTCTGCCATTGGCAATTATTTCTGCCAATTAAGTGGAAATTGAAATTTGTTTTTACTATCTGACTTGAGGAAATTGGCAGGAAAAAAAAGAAACTTTGATTCCTTCATTACTGATCTTTGCATCCTCTCGCTGTGTTTGAAAATGAACGTTTTGGATTGGAGTAGCTTTGGGTGTGAGAAGGAAGCGGTTTTGAAGTTGAATTTTGCAGTAAATTGGAGTTTGATTTACTGGCTACAACCATAGGAAAAATGAAAGAAGAATTGAGAAAGAAAGACAGAAAATGGACCTACAATATTAATAATCTGCCATCATTGTTGAAAGAGAAGATATATGGTGACGTGTTAGCCAACCATGAAGCAAATCCTTAATATTTTTTAATTAAATTAGATCGGCGTCAAATAAGTCGTTGAATTGATTATTGAACTTTTAGTTTTGTATTTAGTACCTTACTAAACTTTAAATAGTGTCTCAATTAACCTTGACAAACAAGTTATATGCTTCCTATCTATGCAAATCATTGACCTTTTTTTCTTCCTTTTTAACTTTGTGTTTTCTATGCAATTATCTATATCTTTTTCTTCTCTATACCTATAAATGAGGTTAATTTTGATTTTGTATTTGTAGTCGTAACTCAAATTATATGCCTCAAATGGTTGATGGTACACTTGACATGAACGAGGACAAGATTTTTGTGCAAGTTTTTGGACCAGAGAAGTATGGACGTGTTCGTGGTTATGGGGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCTTCCAATGTACGTGATCTTGAGCGTCGTCTTAATGAGTCAGAACAACGTCTTCAAGAATTTGAACGACAAAGAAAAATCGAGGTACAAGCCTTCAAAGATCAAATTGTTGAATTAGAAAATCATTTTGAGGATAGATTTAAAACAATGATGGCAGAGATGCGTAAACAATAG

mRNA sequence

CTTCAATCGCTTCATCCTCTTCAGCCGCCCTCCTTCGTTTCGAACCCAGTTTCGCGCCCCAGTGCAACTTGCCCATCGACCACACAACAGCCAGCCGATACGTTCCGGTCTGACCAACGTAACCTCGCAGATCTTTTCATCACCCGTCGCCAGCCTTCAGCCGGAGTTTCGTCCGAACCGTCCGCGACCATGACCACACGCAGGAGTCTCGATCGCCGTCACGCTCGCAGTCGCGACCCACTGTTGACCAACCGAGCTTCACCGAAATGACTTGTTAAAGCTTATGGCTAGAGAAATACATATGGCTAGAGAAATACCTATACAAGAAAGTCAGTGTGAAAGAGTTCTCTTCTGACGATTCCGACCAGTGTGGAATATGAACAAAATCCATTGAGTTACTGCTACGAAATCGAAGACTCTGTGCAGCACTTGAAGAAGTGCATAGTTGAGGTGACAAATATGCCATGGGGTGAGAGAGTCTCATTTGTTTTCAATCCAAATTCTGATTTAGTAGCTAAGTCGTTGCATGTCAGTCCTTTTATGTTCCAAGTTATACTCAATGGACAATGCATGGTGAAGAATCTACTCAAGAAAAAATGTCGTAACTCAAATTATATGCCTCAAATGGTTGATGGTACACTTGACATGAACGAGGACAAGATTTTTGTGCAAGTTTTTGGACCAGAGAAGTATGGACGTGTTCGTGGTTATGGGGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCTTCCAATGTACGTGATCTTGAGCGTCGTCTTAATGAGTCAGAACAACGTCTTCAAGAATTTGAACGACAAAGAAAAATCGAGGTACAAGCCTTCAAAGATCAAATTGTTGAATTAGAAAATCATTTTGAGGATAGATTTAAAACAATGATGGCAGAGATGCGTAAACAATAG

Coding sequence (CDS)

ATGCCATGGGGTGAGAGAGTCTCATTTGTTTTCAATCCAAATTCTGATTTAGTAGCTAAGTCGTTGCATGTCAGTCCTTTTATGTTCCAAGTTATACTCAATGGACAATGCATGGTGAAGAATCTACTCAAGAAAAAATGTCGTAACTCAAATTATATGCCTCAAATGGTTGATGGTACACTTGACATGAACGAGGACAAGATTTTTGTGCAAGTTTTTGGACCAGAGAAGTATGGACGTGTTCGTGGTTATGGGGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCTTCCAATGTACGTGATCTTGAGCGTCGTCTTAATGAGTCAGAACAACGTCTTCAAGAATTTGAACGACAAAGAAAAATCGAGGTACAAGCCTTCAAAGATCAAATTGTTGAATTAGAAAATCATTTTGAGGATAGATTTAAAACAATGATGGCAGAGATGCGTAAACAATAG

Protein sequence

MPWGERVSFVFNPNSDLVAKSLHVSPFMFQVILNGQCMVKNLLKKKCRNSNYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRLQEFERQRKIEVQAFKDQIVELENHFEDRFKTMMAEMRKQ
Homology
[Close]
BLAST of Tan0018084 vs. NCBI nr
Match: XP_038904040.1 (uncharacterized protein LOC120090445 [Benincasa hispida])

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-32
Identity = 80/127 (62.99%), Postives = 96/127 (75.59%), Query Frame = 0 

Query: 34  NGQCMVKNLLKKKCRNSNYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSEL 93
           NG  + +   +K  +  +Y  Q++DGTLDMNED+ FV+VFGPEK+G V GYGVGVTPSEL
Sbjct: 52  NGLAVNETTQEKMSKLKSYASQVIDGTLDMNEDETFVRVFGPEKHGHVHGYGVGVTPSEL 111

Query: 94  FGSSSNVRDLERRLNESEQRLQEFERQRK-------IEVQAFKDQIVELENHFEDRFKTM 153
           FGSSS +RD ERRLNESEQRLQEFE+QRK       +EV+  K QI ELEN FEDRF+ M
Sbjct: 112 FGSSSTIRDHERRLNESEQRLQEFEQQRKEFEQQRELEVEVLKRQISELENRFEDRFQKM 171

[Close]
BLAST of Tan0018084 vs. NCBI nr
Match: XP_008457059.1 (PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo])

HSP 1 Score: 95.9 bits (237), Expect = 3.2e-16
Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = 0 

Query: 51  NYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNES 110
           +Y  Q++DGTLDMN+D IFVQ+FGPEK+  VRGYGVGV  SELFGSSS V DLERRLNES
Sbjct: 124 SYASQVIDGTLDMNDDDIFVQIFGPEKHRHVRGYGVGVIHSELFGSSSKVHDLERRLNES 183

Query: 111 EQ 113
           ++
Sbjct: 184 KK 185

[Close]
BLAST of Tan0018084 vs. NCBI nr
Match: KAA0056079.1 (bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa] >TYK01531.1 bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 2.7e-15
Identity = 44/62 (70.97%), Postives = 52/62 (83.87%), Query Frame = 0 

Query: 51  NYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNES 110
           +Y  Q++DGTLDMN+D IFVQ+ GPEK+  VRGYGVGV  SELFGSSS V DLERRLNES
Sbjct: 26  SYASQVIDGTLDMNDDDIFVQICGPEKHRHVRGYGVGVIHSELFGSSSKVHDLERRLNES 85

Query: 111 EQ 113
           ++
Sbjct: 86  KK 87

[Close]
BLAST of Tan0018084 vs. NCBI nr
Match: KAA0049895.1 (uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa] >TYK07633.1 uncharacterized protein E5676_scaffold105G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-15
Identity = 47/64 (73.44%), Postives = 51/64 (79.69%), Query Frame = 0 

Query: 55  QMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRL 114
           Q+++G LDMNED IFVQVFGPEK+G VRGYGVGVTP ELF SSS V DLE  LNE E RL
Sbjct: 52  QVINGILDMNEDDIFVQVFGPEKHGCVRGYGVGVTPYELFRSSSKVHDLEHGLNEFELRL 111

Query: 115 QEFE 119
            E E
Sbjct: 112 HESE 115

[Close]
BLAST of Tan0018084 vs. NCBI nr
Match: KAF3956246.1 (hypothetical protein CMV_018610 [Castanea mollissima])

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-14
Identity = 57/133 (42.86%), Postives = 81/133 (60.90%), Query Frame = 0 

Query: 34  NGQCMVKNLLKKKCRNSNYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSEL 93
           NGQ + ++         N   Q+ +G L +++D++FV+VFGPE++GRVRGYG GVTP+ L
Sbjct: 516 NGQAVNESTQDALVALRNLTTQVNEGALQISQDQMFVEVFGPERHGRVRGYGAGVTPTML 575

Query: 94  FGSSS-NVRDLERRLNESEQRLQEFERQR-------KIEVQAFKD-------QIVELENH 152
           +GSSS  + DLE+RL ESEQ+  E E +R       K EV+  K        Q+VE   H
Sbjct: 576 WGSSSCRMYDLEKRLQESEQKRLESEHKRIEADAELKGEVKHLKSMLEQQAIQMVEQRRH 635

[Close]
BLAST of Tan0018084 vs. ExPASy TrEMBL
Match: A0A1S3C480 (uncharacterized protein LOC103496828 OS=Cucumis melo OX=3656 GN=LOC103496828 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.6e-16
Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = 0 

Query: 51  NYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNES 110
           +Y  Q++DGTLDMN+D IFVQ+FGPEK+  VRGYGVGV  SELFGSSS V DLERRLNES
Sbjct: 124 SYASQVIDGTLDMNDDDIFVQIFGPEKHRHVRGYGVGVIHSELFGSSSKVHDLERRLNES 183

Query: 111 EQ 113
           ++
Sbjct: 184 KK 185

[Close]
BLAST of Tan0018084 vs. ExPASy TrEMBL
Match: A0A5D3BP34 (Bromodomain-containing factor 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00930 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-15
Identity = 44/62 (70.97%), Postives = 52/62 (83.87%), Query Frame = 0 

Query: 51  NYMPQMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNES 110
           +Y  Q++DGTLDMN+D IFVQ+ GPEK+  VRGYGVGV  SELFGSSS V DLERRLNES
Sbjct: 26  SYASQVIDGTLDMNDDDIFVQICGPEKHRHVRGYGVGVIHSELFGSSSKVHDLERRLNES 85

Query: 111 EQ 113
           ++
Sbjct: 86  KK 87

[Close]
BLAST of Tan0018084 vs. ExPASy TrEMBL
Match: A0A5A7U8E9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00340 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15
Identity = 47/64 (73.44%), Postives = 51/64 (79.69%), Query Frame = 0 

Query: 55  QMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSNVRDLERRLNESEQRL 114
           Q+++G LDMNED IFVQVFGPEK+G VRGYGVGVTP ELF SSS V DLE  LNE E RL
Sbjct: 52  QVINGILDMNEDDIFVQVFGPEKHGCVRGYGVGVTPYELFRSSSKVHDLEHGLNEFELRL 111

Query: 115 QEFE 119
            E E
Sbjct: 112 HESE 115

[Close]
BLAST of Tan0018084 vs. ExPASy TrEMBL
Match: A0A2N9HCP8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40018 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 4.2e-14
Identity = 44/93 (47.31%), Postives = 70/93 (75.27%), Query Frame = 0 

Query: 55   QMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSN-VRDLERRLNESEQR 114
            Q+ +G+L M+ED++FV+VFGPE++GRVRGYG GVT ++L+GSSS+ + DLE+RL ESEQ 
Sbjct: 988  QVNEGSLQMSEDQMFVEVFGPERHGRVRGYGAGVTATKLWGSSSSKINDLEKRLQESEQM 1047

Query: 115  LQEFERQRKIEVQAFKDQIVELENHFEDRFKTM 147
              E   +   +V+  ++Q+++L++  E+R   M
Sbjct: 1048 RLEANAKANAKVELLEEQVIQLKDLLEERSTQM 1080

[Close]
BLAST of Tan0018084 vs. ExPASy TrEMBL
Match: A0A2N9GUC6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30960 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 4.2e-14
Identity = 44/93 (47.31%), Postives = 70/93 (75.27%), Query Frame = 0 

Query: 55  QMVDGTLDMNEDKIFVQVFGPEKYGRVRGYGVGVTPSELFGSSSN-VRDLERRLNESEQR 114
           Q+ +G+L M+ED++FV+VFGPE++GRVRGYG GVT ++L+GSSS+ + DLE+RL ESEQ 
Sbjct: 9   QVNEGSLQMSEDQMFVEVFGPERHGRVRGYGAGVTATKLWGSSSSKINDLEKRLQESEQM 68

Query: 115 LQEFERQRKIEVQAFKDQIVELENHFEDRFKTM 147
             E   +   +V+  ++Q+++L++  E+R   M
Sbjct: 69  RLEANAKANAKVELLEEQVIQLKDLLEERSTQM 101

[Close]
BLAST of Tan0018084 vs. TAIR 10
Match: AT1G30130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1365 (InterPro:IPR010775); Has 1789 Blast hits to 1789 proteins in 449 species: Archae - 0; Bacteria - 824; Metazoa - 0; Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 920 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 0 

Query: 2   PWGERVSFVFNPNSDLVAKSLHVSPFM 29
           PWGERV+FVF+P SDLVAKSL VSPFM
Sbjct: 142 PWGERVTFVFDPESDLVAKSLQVSPFM 168

[Close]
BLAST of Tan0018084 vs. TAIR 10
Match: AT1G30130.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1365 (InterPro:IPR010775); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 0 

Query: 2   PWGERVSFVFNPNSDLVAKSLHVSPFM 29
           PWGERV+FVF+P SDLVAKSL VSPFM
Sbjct: 142 PWGERVTFVFDPESDLVAKSLQVSPFM 168

The following BLAST results are available for this feature:
BLAST of Tan0018084 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0018084 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038904040.11.4e-3262.99uncharacterized protein LOC120090445 [Benincasa hispida][more]
XP_008457059.13.2e-1672.58PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo][more]
KAA0056079.12.7e-1570.97bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa] >TYK0... [more]
KAA0049895.14.6e-1573.44uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa] >TYK07... [more]
KAF3956246.12.3e-1442.86hypothetical protein CMV_018610 [Castanea mollissima][more]
BLAST of Tan0018084 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C4801.6e-1672.58uncharacterized protein LOC103496828 OS=Cucumis melo OX=3656 GN=LOC103496828 PE=... [more]
A0A5D3BP341.3e-1570.97Bromodomain-containing factor 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1... [more]
A0A5A7U8E92.2e-1573.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A2N9HCP84.2e-1447.31Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40018 PE=4 SV=1[more]
A0A2N9GUC64.2e-1447.31Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30960 PE=4 SV=1[more]
BLAST of Tan0018084 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G30130.11.3e-0785.19unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G30130.21.3e-0785.19unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0018084.1Tan0018084.1mRNA
Tan0018084.2Tan0018084.2mRNA
Tan0018084.3Tan0018084.3mRNA