Tan0017980 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAGAGAGAGAGTAAGAGAGAGAAACTCTTGATCTCGGATGCAAAGCAAAGCAACCGCAACTGCAACAGCTTCTCTCGTCTCTCTCGTTTTCCAGTTGATACTTCCACAGCTTGGGACACAAAGCTGTAATGGCGAGCCGATACTGGATGGTCTCTTTACCCGTTCAAGGCTCCGCTTCTTCCCTATGGAATCGTCTCCAAGAACAAATCTCCAAGCACTCTTTCGATACTCTTCTTTACAGGGTACTCATTTCGCCGCTAAATCTTCAAATCTCCTTGATTTCTATGATTTTACACCCCCTTTTATTTTTTATGTTTCTGATTTTTTCTTTTGTTTAGTTCAATATTCCTAATCTCCGCGTTGGAACGCTGGATTCGCTCCTTTCCCTCAGCGATGATCTCCTCAAGGTATTTCTTTCTTTCCTCTTTCGAATTGAATTGATGCCTTCCAATGCGATTTAATTTGTTTGTTTTTAAAATTAAAATTGGGCTGAAAATCTTCGCAATCTGTATGCTTCCGGTTTTTACTATGATATTAGAAGTATCAAAATCCATTTGATTGTGCAGTCGAACAGTTTTGTGGAAGGAGTTTCCCAGAAGATCAGACGGCAGATCGAGGAACTGGAAAAGGTTTCGGGTGTGGAGAGCAATGTTTTGACGGTTGATGGAGTCCCCGTTGATTCGTACCTTACTAGGTAAAATGGGCGTTTTTTTTTTTTTAATAAAAAATTGATTTCAATTTGGGAAATTAGGTTCAAATGTTGTGGTCACATGTCTGCGTGATGTGCTGAATTTTGTTTGGTAATGGAAGGTTCGTGTGGGATGAAGCCAAGTACCCAACAATGTCGCCTCTGAGAGACATTGTGGATAGCATTCACAGTCAAGTGGCCAAGATTGAGGATGACCTCAAGGTATCGTTTATTTGCTTGAGCTGATTTGAGATGTAGTTATCTTAAGATTTGTTGAAACTCTTGTTGAGATTGTGGAAAATTCTCCAGAAGATTTCCAAAAAAAAAAAAAATCCTCCATTCGGGATATCTCCCTGCCTATTTCATAAGTTATTACCATTATGAATATTCTAGTTTGATGGAGTAAATATTTGTTTTGACATTGCCCTTCATGGTTAATCATGATCTTCTTTGTATCTTGTTGTTACTTCTGTTTTCTGAATGCATTACTGCCCTCACTTTTGTAAAGATAAAGAATAGTCAAGCTTCTAATGGCTAGGTGTAGAATTTTTTTTGCTGCCGTCTTAAGGTTGTATTGTTGTGAAAAAATGGCTTTGCTGAAGGTGGGAGTTGGTGGACGAGATATGAAATCCCAAGTCTTGCACTGTGAAGTAATTTTTAGGAAGTTCTTAAATTTTAAAAACTATCACGATCAGATTATAATTTGTGAGAGTACTAGTAAGGGATATATTGGTAATATTAATAAGGGCATAGTGATAATTAGTTAGGGCCTTAGGGGTGACTTGGTTATAAATAGGGGAGTTAGGGAGCTTAGAAGGAAGAAGGGATTTTGAGTATTGTCCAATGTGGGACTTTGGGAGAGACATAGTGCTCTTGAAAGGCTATAGATATTGTGATTTCTCTTTGATATTGCAATATAGTTCTATTTTATGTTTCCTTGTTAGGGGAATCCTAACAAATTACCATTATGCCGTTACTAATATTTTCAATACAACCCTTACTAGTACTCTCACATAATCATCTTTGTCTCTTGACCTAACCTTAGGTCCTTATCAGCAACAGCAACAGCAAGGCGGTAGCCATTAATATAGGATGAGACTACAGCAGACTTTACATGTGTTAAATCATATATATATATATATTATCACTTGTATTGAATCAGATATTTCAATATAGTTGAATATTTTCATACAGTTCAATGATTTTCACATTAAAACTATGTTCTTGATTGTGACAATGTGATATGCATATAAGTGATGAAATATGCAATAATCTGAGTGAGTTAATTACACTTTTGAAACCAAATAAACATTCTTATAAATTATTTAATATCTTTTGAAAACAAAAATTCGGAATCAACTATGTTTAGGCACTTGCATGCTTTAAAAAAAGGTTGATGTTGTCTCCACTCTGTTATTACTTTTCTCATTTATTTCTTTTTATGTGTTTTTGAAACAAAAATAAATATAAAATTTAGCACTTTTGTTCAAGTATCTAATAATGATTCAACAAATATTCACAAGTGCTTGACACGCATGTAATATGGTTCAGAAAGTCTTCAACATGTATCTTGTATGCTTGACTAGCATCCAACACATTTTTACTGGGGTTTGAGTGTTAGATACACATTAGGATTGAACAACCAAACTAAAATGTCAATGCTTCATAGGAGATTTTACCATCATGCCACCATAACCTCATCCATTGATTTTCTAACTTGCAATATTGTGCTATTTTATTATTTAGTGCTCTCCTGGAACTTTATTAATGTAAATTGCTTTCTTTACTGACCCTTGGTACTAAACTAACCAGAAATAGATGAAACCTTTTTGTTATCTACTTCATATATTTCAATTAGTTTTTGGATGCTTAGGGGTTTCAAATAGAAATTTTCATTGAAAGCTATTTCTTTTGCTAGATTCGTGTTGCTGAGTACAATAATGTGCGGAGTCAACTTAATGCCATTAACAGGAAGCAAAGTGGAAGGTATGAATGCACATAATTGATACATTGGTGTTTAGCATATTTGATGTTTCTAATTGATCTTGGTTTCATCAGCTTGGCAGTCCGTGATATTTCCAATCTTGTAAAACCAGAGGACATAATTACCTCAGAACATCTAGCAACCCTTCTCGTGGTTGTTCCCAAGTACTCACAGAAAGAATGGCTATCTAGCTATGAAACACTGACTAGCTATGTGGTAAGTTTGTGTTTGTAACTTTTTACTCTTGTACAACAGATTTACATGGTTACTTTTCCATGGCTGACTTAGATTACGTCAGATTAGGCGAAATGAATTACGCAGATGTAGCCTCACTATGTTGAAATGTCTGGGACTATAATGCTGCTACTTCTTGTTTCTTGTTCTGTTCTTTTTATGTTCTCATAATTATGCTAAGCTTTTTTAGGTTCCCAGGTCTTCCAAGAAGTTATTCGAGGATAATGAGTATGCCCTTTACACTGTAACACTCTTTAACCGCGTTGCAGACAATTTCAAAACAAGTGCACGTGAAAAAGGATTCCAGGTGAATAATAAATTCATTTTGAATCATCTTTTAAAACCCAGTTATTAACATATAATAGTTTTTCAGGCCTAATCTCTTTTAATTTTTAATGTGTTGGAGATTCGTGAATTTGAATATAGTCCAGAAGCACAGGAGAGTAGAAAACAGGAGTTAGAAAAATTGGTGCAGGACCAGGATGGTTTGAGAAGTTCTTTATTGCAGTGGTCCTACGCTAGTTATGCTGAGGTTGCTCCTTTTTTCAGGTGTACCTGTAAAAATGCATGCTTTTTTTTATTCCTTCCTCTAATTGAGTTTCTTATATACCTGCAGGTTTTCATTTCCTGGATGCACTTTTGTGCTGTACGTGTCTTTGCCGAGAGTATCCTGAGATATGGTTTACCACCATCCTTCTTGGTATATAACTTGCATTTGCTCCCTGGTTTCTGCCAAGCATTTCCTCTTTTGACGGAGCTGATTCTGTCAATGATTTGCAGGCATCTGTTCTGGCACCATCTTCTAAAAGTGAGAAGAAAGTTAGGTCAATCCTGGAAGGTTTGTGCGACAGTGCTAACAGGTAAGTTATCGAGTATTTTCATGTTCTATTGACATTTAATGGATGTTTACTGAAGTTGCTCACAGTAAATAATTCAACTGTCACATCATGTTGACTGACAGTTACTCGGTAAAGGGTCAATTGCTATGCCATGTTAGCTTAGTTAAGATTCAACTGTGATATACTCGGGAAATATTATACTGTCATGTTAGATACTTACCACAAACACTTTATCTGATCTATAACGCCCCGCGTTAAAAAATTAGGCCATTTTAGGGTAGTTAGGATATTCATTGGAGTTCTAATTTAGAATATTATGATTCAAGTTTAGTCCCTTAAGTTTGGTAAATAAAATTTCTATAATTTTGGAAAAGGAGATTTTGAATTAAATCTTTTTGCATACTTTAACATTCTGAACTAGATTGTTAAATATCTTCTCTTATTTAAGAAATTAGTGGATGTAAAAGTAAAATTAGTGGATGTATAAGTCAATATAGGATAAGAAAGATGAATTTTGGGAGTGAAAAAAAAATACTTAACATATAATTTATATTTCTATTGTTATAACTTATAAGATATTGAGTTATTTTAACAAAATATGTATTTGGTCTAGTACTGGATCTGGAAAGAAGCAGTCTAAGGTTTCTATTAAATGTAATACAGAAAATTTACCATTGGGTTCGGAAACAGATTTTCATGTAAAATTTATATTCAAAACTAGATCATTTGAAGTACAAGGATCAAAAGAAAAGAAATGTGTAAACTTAGGGACTAAAGTAGGCTTTAAGCCTATATTCTAATAAACATGTCTTTGCTATATATATATATATATATATATATATATATATATATCCTATTAGTTTATCTCTAAGATGATAAGACATCTATTACCTTTCTCGAGGTTAAATGTTCAATCCCCCACCAATCATTGAACTGAAGAGAAAAAAAAAAATAGCTTGTCCCTTGGTCGATGCTCCATGTCCATGTCATATGGATTTTGTGTTTATGGAATGGATTTTATGGATGTGGTTGTTTATGATTCCAGTATTTTAATGATTTAGAATTTTGGTTGTGCAGTACATATTGGAAAACTGAAGATGAAGTGGGAGGAGGGATGGCTGGTCTCGGAGGAGATTCTGATGCACACCCATATGTCTCCTTCACAATCAATCTTGCCTAATTCACCTCCTTTTAACGTCCAAAGTTGAGAAGGTTTGTTCTCTATAGAGCAATAATAGTGGAGTGAACCAGACCTACATTTTATTATTTCACTGTCATATTCCTATTCGTGGTTGTTTATGAATAATTGCATCTCAAGTTCATGTGAGGGGTTTGTGAAATATATGAAGCTTATATATTTATTTGATTTGTCAATAATCATATATTCTGAGAAGTGAGAACTACCGTGCGAGGAGTTCGACATTTTTGAAAAGGTACGACATTTGGTACCAAACAAAATTACTTGTGCTCGATGTTTGATTGATTTTATTGCATTGTGATTCCATAGTGAACCCA GAGAGAGAGAGAGTAAGAGAGAGAAACTCTTGATCTCGGATGCAAAGCAAAGCAACCGCAACTGCAACAGCTTCTCTCGTCTCTCTCGTTTTCCAGTTGATACTTCCACAGCTTGGGACACAAAGCTGTAATGGCGAGCCGATACTGGATGGTCTCTTTACCCGTTCAAGGCTCCGCTTCTTCCCTATGGAATCGTCTCCAAGAACAAATCTCCAAGCACTCTTTCGATACTCTTCTTTACAGGTTCAATATTCCTAATCTCCGCGTTGGAACGCTGGATTCGCTCCTTTCCCTCAGCGATGATCTCCTCAAGTCGAACAGTTTTGTGGAAGGAGTTTCCCAGAAGATCAGACGGCAGATCGAGGAACTGGAAAAGGTTTCGGGTGTGGAGAGCAATGTTTTGACGGTTGATGGAGTCCCCGTTGATTCGTACCTTACTAGGTTCGTGTGGGATGAAGCCAAGTACCCAACAATGTCGCCTCTGAGAGACATTGTGGATAGCATTCACAGTCAAGTGGCCAAGATTGAGGATGACCTCAAGATTCGTGTTGCTGAGTACAATAATGTGCGGAGTCAACTTAATGCCATTAACAGGAAGCAAAGTGGAAGCTTGGCAGTCCGTGATATTTCCAATCTTGTAAAACCAGAGGACATAATTACCTCAGAACATCTAGCAACCCTTCTCGTGGTTGTTCCCAAGTACTCACAGAAAGAATGGCTATCTAGCTATGAAACACTGACTAGCTATGTGGTTCCCAGGTCTTCCAAGAAGTTATTCGAGGATAATGAGTATGCCCTTTACACTGTAACACTCTTTAACCGCGTTGCAGACAATTTCAAAACAAGTGCACGTGAAAAAGGATTCCAGATTCGTGAATTTGAATATAGTCCAGAAGCACAGGAGAGTAGAAAACAGGAGTTAGAAAAATTGGTGCAGGACCAGGATGGTTTGAGAAGTTCTTTATTGCAGTGGTCCTACGCTAGTTATGCTGAGGTTTTCATTTCCTGGATGCACTTTTGTGCTGTACGTGTCTTTGCCGAGAGTATCCTGAGATATGGTTTACCACCATCCTTCTTGGCATCTGTTCTGGCACCATCTTCTAAAAGTGAGAAGAAAGTTAGGTCAATCCTGGAAGGTTTGTGCGACAGTGCTAACAGTACATATTGGAAAACTGAAGATGAAGTGGGAGGAGGGATGGCTGGTCTCGGAGGAGATTCTGATGCACACCCATATGTCTCCTTCACAATCAATCTTGCCTAATTCACCTCCTTTTAACGTCCAAAGTTGAGAAGGTTTGTTCTCTATAGAGCAATAATAGTGGAGTGAACCAGACCTACATTTTATTATTTCACTGTCATATTCCTATTCGTGGTTGTTTATGAATAATTGCATCTCAAGTTCATGTGAGGGGTTTGTGAAATATATGAAGCTTATATATTTATTTGATTTGTCAATAATCATATATTCTGAGAAGTGAGAACTACCGTGCGAGGAGTTCGACATTTTTGAAAAGGTACGACATTTGGTACCAAACAAAATTACTTGTGCTCGATGTTTGATTGATTTTATTGCATTGTGATTCCATAGTGAACCCA ATGGCGAGCCGATACTGGATGGTCTCTTTACCCGTTCAAGGCTCCGCTTCTTCCCTATGGAATCGTCTCCAAGAACAAATCTCCAAGCACTCTTTCGATACTCTTCTTTACAGGTTCAATATTCCTAATCTCCGCGTTGGAACGCTGGATTCGCTCCTTTCCCTCAGCGATGATCTCCTCAAGTCGAACAGTTTTGTGGAAGGAGTTTCCCAGAAGATCAGACGGCAGATCGAGGAACTGGAAAAGGTTTCGGGTGTGGAGAGCAATGTTTTGACGGTTGATGGAGTCCCCGTTGATTCGTACCTTACTAGGTTCGTGTGGGATGAAGCCAAGTACCCAACAATGTCGCCTCTGAGAGACATTGTGGATAGCATTCACAGTCAAGTGGCCAAGATTGAGGATGACCTCAAGATTCGTGTTGCTGAGTACAATAATGTGCGGAGTCAACTTAATGCCATTAACAGGAAGCAAAGTGGAAGCTTGGCAGTCCGTGATATTTCCAATCTTGTAAAACCAGAGGACATAATTACCTCAGAACATCTAGCAACCCTTCTCGTGGTTGTTCCCAAGTACTCACAGAAAGAATGGCTATCTAGCTATGAAACACTGACTAGCTATGTGGTTCCCAGGTCTTCCAAGAAGTTATTCGAGGATAATGAGTATGCCCTTTACACTGTAACACTCTTTAACCGCGTTGCAGACAATTTCAAAACAAGTGCACGTGAAAAAGGATTCCAGATTCGTGAATTTGAATATAGTCCAGAAGCACAGGAGAGTAGAAAACAGGAGTTAGAAAAATTGGTGCAGGACCAGGATGGTTTGAGAAGTTCTTTATTGCAGTGGTCCTACGCTAGTTATGCTGAGGTTTTCATTTCCTGGATGCACTTTTGTGCTGTACGTGTCTTTGCCGAGAGTATCCTGAGATATGGTTTACCACCATCCTTCTTGGCATCTGTTCTGGCACCATCTTCTAAAAGTGAGAAGAAAGTTAGGTCAATCCTGGAAGGTTTGTGCGACAGTGCTAACAGTACATATTGGAAAACTGAAGATGAAGTGGGAGGAGGGATGGCTGGTCTCGGAGGAGATTCTGATGCACACCCATATGTCTCCTTCACAATCAATCTTGCCTAA MASRYWMVSLPVQGSASSLWNRLQEQISKHSFDTLLYRFNIPNLRVGTLDSLLSLSDDLLKSNSFVEGVSQKIRRQIEELEKVSGVESNVLTVDGVPVDSYLTRFVWDEAKYPTMSPLRDIVDSIHSQVAKIEDDLKIRVAEYNNVRSQLNAINRKQSGSLAVRDISNLVKPEDIITSEHLATLLVVVPKYSQKEWLSSYETLTSYVVPRSSKKLFEDNEYALYTVTLFNRVADNFKTSAREKGFQIREFEYSPEAQESRKQELEKLVQDQDGLRSSLLQWSYASYAEVFISWMHFCAVRVFAESILRYGLPPSFLASVLAPSSKSEKKVRSILEGLCDSANSTYWKTEDEVGGGMAGLGGDSDAHPYVSFTINLA Homology
BLAST of Tan0017980 vs. ExPASy Swiss-Prot
Match: Q9SDS7 (V-type proton ATPase subunit C OS=Arabidopsis thaliana OX=3702 GN=VHA-C PE=1 SV=1) HSP 1 Score: 624.0 bits (1608), Expect = 1.1e-177 Identity = 313/376 (83.24%), Postives = 343/376 (91.22%), Query Frame = 0
BLAST of Tan0017980 vs. ExPASy Swiss-Prot
Match: Q9SCB9 (V-type proton ATPase subunit C OS=Hordeum vulgare OX=4513 GN=VATC PE=1 SV=1) HSP 1 Score: 432.6 bits (1111), Expect = 4.7e-120 Identity = 228/339 (67.26%), Postives = 274/339 (80.83%), Query Frame = 0
BLAST of Tan0017980 vs. ExPASy Swiss-Prot
Match: Q9U5N1 (V-type proton ATPase subunit C OS=Manduca sexta OX=7130 PE=2 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.9e-73 Identity = 159/380 (41.84%), Postives = 238/380 (62.63%), Query Frame = 0
BLAST of Tan0017980 vs. ExPASy Swiss-Prot
Match: Q7T385 (V-type proton ATPase subunit C 1-A OS=Danio rerio OX=7955 GN=atp6v1c1a PE=2 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 1.6e-72 Identity = 146/376 (38.83%), Postives = 241/376 (64.10%), Query Frame = 0
BLAST of Tan0017980 vs. ExPASy Swiss-Prot
Match: Q5XIY6 (V-type proton ATPase subunit C 1-B OS=Danio rerio OX=7955 GN=atp6v1c1b PE=2 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 6.8e-71 Identity = 146/377 (38.73%), Postives = 238/377 (63.13%), Query Frame = 0
BLAST of Tan0017980 vs. NCBI nr
Match: XP_004150739.1 (V-type proton ATPase subunit C [Cucumis sativus] >KGN51035.2 hypothetical protein Csa_023079 [Cucumis sativus]) HSP 1 Score: 716.8 bits (1849), Expect = 9.5e-203 Identity = 367/376 (97.61%), Postives = 372/376 (98.94%), Query Frame = 0
BLAST of Tan0017980 vs. NCBI nr
Match: XP_038906499.1 (V-type proton ATPase subunit C [Benincasa hispida]) HSP 1 Score: 715.3 bits (1845), Expect = 2.8e-202 Identity = 367/376 (97.61%), Postives = 373/376 (99.20%), Query Frame = 0
BLAST of Tan0017980 vs. NCBI nr
Match: XP_008463120.1 (PREDICTED: V-type proton ATPase subunit C [Cucumis melo]) HSP 1 Score: 713.8 bits (1841), Expect = 8.0e-202 Identity = 366/376 (97.34%), Postives = 371/376 (98.67%), Query Frame = 0
BLAST of Tan0017980 vs. NCBI nr
Match: XP_022922409.1 (V-type proton ATPase subunit C-like [Cucurbita moschata] >KAG6601990.1 V-type proton ATPase subunit C, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032687.1 V-type proton ATPase subunit C [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 704.1 bits (1816), Expect = 6.3e-199 Identity = 361/376 (96.01%), Postives = 369/376 (98.14%), Query Frame = 0
BLAST of Tan0017980 vs. NCBI nr
Match: XP_023551222.1 (V-type proton ATPase subunit C [Cucurbita pepo subsp. pepo]) HSP 1 Score: 703.0 bits (1813), Expect = 1.4e-198 Identity = 360/376 (95.74%), Postives = 368/376 (97.87%), Query Frame = 0
BLAST of Tan0017980 vs. ExPASy TrEMBL
Match: A0A1S3CII6 (V-type proton ATPase subunit C OS=Cucumis melo OX=3656 GN=LOC103501345 PE=3 SV=1) HSP 1 Score: 713.8 bits (1841), Expect = 3.9e-202 Identity = 366/376 (97.34%), Postives = 371/376 (98.67%), Query Frame = 0
BLAST of Tan0017980 vs. ExPASy TrEMBL
Match: A0A6J1E3A6 (V-type proton ATPase subunit C OS=Cucurbita moschata OX=3662 GN=LOC111430411 PE=3 SV=1) HSP 1 Score: 704.1 bits (1816), Expect = 3.1e-199 Identity = 361/376 (96.01%), Postives = 369/376 (98.14%), Query Frame = 0
BLAST of Tan0017980 vs. ExPASy TrEMBL
Match: A0A0A0KMK9 (V-type proton ATPase subunit C OS=Cucumis sativus OX=3659 GN=Csa_5G312840 PE=3 SV=1) HSP 1 Score: 703.0 bits (1813), Expect = 6.8e-199 Identity = 361/370 (97.57%), Postives = 366/370 (98.92%), Query Frame = 0
BLAST of Tan0017980 vs. ExPASy TrEMBL
Match: A0A6J1FGK3 (V-type proton ATPase subunit C OS=Cucurbita moschata OX=3662 GN=LOC111445488 PE=3 SV=1) HSP 1 Score: 702.6 bits (1812), Expect = 8.9e-199 Identity = 359/376 (95.48%), Postives = 368/376 (97.87%), Query Frame = 0
BLAST of Tan0017980 vs. ExPASy TrEMBL
Match: A0A6J1JM64 (V-type proton ATPase subunit C OS=Cucurbita maxima OX=3661 GN=LOC111487135 PE=3 SV=1) HSP 1 Score: 701.4 bits (1809), Expect = 2.0e-198 Identity = 358/376 (95.21%), Postives = 369/376 (98.14%), Query Frame = 0
BLAST of Tan0017980 vs. TAIR 10
Match: AT1G12840.1 (vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) ) HSP 1 Score: 624.0 bits (1608), Expect = 7.8e-179 Identity = 313/376 (83.24%), Postives = 343/376 (91.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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