Tan0017930 (gene) Snake gourd v1

Overview
NameTan0017930
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUbiquitin domain-containing protein
LocationLG01: 8645829 .. 8650216 (+)
RNA-Seq ExpressionTan0017930
SyntenyTan0017930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTAATTACTTATTTGCTTAAATTCAATATTCGTCTGAGCTTCTTCTTCTTCTTCCTCTACAAAAAGCTTCTTCTTCAGCTCTGCAAAATTCTTCCGTTTCAACTTTCGACGGAATTTCTGCTTTTCTCTGGCTTAATCTTTCTCTCTATCTACAGAAATTGAGGCTTGCGTTCAAGCAAAGCGCAATGGGCTGTGCTGGATCGTCGCAGACCAACGGAGACGGTGAGGTTCACTTCGCTTCTGTGATTCTCTTTTCGATTATTGGACAAATTTTGTTCTATGTTCGGCTGATGGCTTTGTTATGAGGAATATTAGATGGTAATCAATGCGAGTTTACTTGCTGTGCTGGGGAGAGCGGGAGTGTTGGTTTGGTAGTATTGAATTTGTTGGAAATGAATTGGATTGCTCTTGATTTTCTTTGTTCGTTGCGGCTGTTTTATTGATTTTCTTTCTGCCGTTATGGCGTTGCTTGATGGTGTGCGTTTGCTTGTTTGTTTGTTTTGTGACTGTGACAGTGGTTTGAGGCCTCGAGATTCTTAAACTTCACTTGCGATTACGTGGTGGTGCATTAATTAGGATAAGAAGTTTTCAGTTTAGATAATTGAGTTAGTCTATGGAAATAATTTTATCCTTCATTTATTTTGAGAATGATGGGTTTTTTAAGGTTCATTAGAATTACTGCTTGCAGATTCATGGACATTTGCCGCTGATGATTCAAATTCCACTGCTAATTGATTCTTTCAGTTTCAGATCAATGAAGTTATCTGGAATTGCATTCAGGGTCTTTGCATATTTGTTTCTAAAATCTAGTTTCATATTCAAAGAATTTGAGTAGATTAATTGTGCAGCTGTAATATTAGCACTTTAGGACTAAAATTCCAGCAACTAACATATAAATGGACAATATCTTATATTTCTACTTTATACTGCAATTAAAACGAAAATATGTTGAAGCTCCGTTACAACATGCTAGTTTGTGGAACGTGAATTGTCTTTTGACTCTTTTCTATTTTCATAACAAGTACAGATGAGTAACAGGAATCGTTGACCTTCTTGTATAATAGGAAGAAAATACTGCTGAAGATACTGAAATGGAAAGGAAGCGCTTCAAAAAAATGTAAAGAAAAGGAAAGAGAAAATAGCAAAATTTTAAGACGAAGTTTTCTAATTCTCCTTGTGTTGTTTAAAATACTGAAGGTTTAGGAATTTTTTTTGAAATTTTCAAGGCTACCCTTTGTTATGAATGCTGCTACGCTTGAACCTAATTTAGTTGGTTTATACTCGATTCACATATGACTGAAATTGCTTCTTTATGTAGGATCCATAAAGAAGATACGCAAGCCAAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCATGCAACTACGGGATGAGTTTTGGGATACTGCACCTCACTATGGTGGTCGAAAAGGTAGTCCTATCTCTAACATATTTTTGCTAGTGTTACTTCATGGTTTTTTAGAGGTTAGCTGATCAATAAAATTACTGAGAGTTTAACTATTTAGGAATTGACCAGTACTATATCATATTGTGGAGTATCTCATGATTTCTGGTTTCAGAATCTATTTTTCTTTCTCGAGGAAAATGTAAAAGTAGGGTTAGATGACCATCCCATCCATGGAAAAGAGCGAATACTGTAGTTGCAGGGGACCCAATGAAGGTTGGGACGAATTATCTCTTGGATATGACCATGATGTCATTCACATCAATAAGAACAATTATTGGACCTATTTTCAACTTCTAGGATCCTATCATTCGTCTTCCCTATTTCCTAATAAACTAAGTTCTTCGGTTTGGAGAGATAAGGTTTTCTATTTTTATGCTGATTCCAGATTGCTGTTACCAACATCCAAGAATTTCATTTGACGTGTAGGCCTTTCCAATTGTTTCATTTTGCTTAGTGCCCAACTCAAACGGGGATGCTTTCTGGGAAGAAATGTGATGTAGAGAGTTCGTTAAAGTGGTCTAATTGATTTAGTTTTTTGATTACGTAGTTAGCTATTAATTATTCTATGAATATTGACTTTTAGTTCTTGTGTGGTTACATCTTTAGAATCAGTTTCAATTGTGAGTAAAGATCTCTTTTGAGGACTCTTTGTGAGAACTTAGGCTACACCAAAATGATTAACTTCTTTTTTCTTATGCTTAGAGCACTCATGATGTGTTTTTACCCACGATTATGGAACTTGATTAACTAGAAGGCTCATGTCTGGACTTCACTTTTGTTGGGTTGGCTTCTTGTAATTTTATTTACTTTCTTCATGTTTCTTTTCCCTTTTCTTGTGCTTTTTAGTGGTCTTTAGTGTTTTTGTAAAAGCTTAATGAAAGTCCATTTATCGCCACAAATTTTTGAAATGGCTTGCCTCATTCAAAATTCTCTTCACTCATAATGCATTTTGCAATCTGTTATTGATCTGAGGTGAGGGACATTAGTTTTTATTTTTCTCCAACTTTCAGCTTTCACTTCCCCCCGAATGGGTTTGATCCCGTTGCATACTAGATTGAAAGCAATGCTCTTTGGAATTTAAGTCAAACGGTTTGGTCCTAACTTTCCCTTAGACGATGTTCTTGCCGCGCTTTTGTTTGATGCAAACCTTAACCTTGTGTCTATACGAAGGTTTCTAATACACATCAAGACACAATTTTCTGTTAGTTTTCACTTGATTTTAGTTGACAATTGAAACGTTAGATCTCAGGTATATGGTTGTTGGAAATGGCCAAATAAAGTGTCAGTTCCAAAATTCTTCAATCTTCCACCTAACATATCTCCGCAAGATATAGAGTGAGGATCTCTTTGGAATTCCAAACGAATATTGAAACGATGTAGGATTTTGTACCAAAAATCACGAGCAAAAGATGATTGGCTAATTCATGGGCCTTGAATAAAGAGAACGCTATGTAATGAGAGGGCACCAGTATTTAGTTTTTCTAAAAATTCTGAAAAAGGAACAGAAGGCTGGCTTCTAACCGAGAAAAATAGAGAGGATCAAAGAAAGGTAGTGAAAGAGACCATTTTAGATACAAAAAGGTAGAATTTACTAGAAATGGAGCCACTACACCACACTCTGCAGTCAACAAGGGGAATGAGTGACGTGTATAAGATTTATAAGAGAAGAAAGTTTAGTTAGCTCAACATCGTTTTGATTCCTTCTGAAAGACAAATCGTGAGAAACATGAGTAATAAAGACTCAGCCAAACAGTCATGATTTGAAAATTGTGTTTTAGACGGTGAAAGGTTCTGAGATGAGTTAGAAGTGAGTAAAATTTCTCAAAATAGGATTCTGATACTATCTCCTAATAGTTTTCTAAGATGAATACTAGAATTTTGCTCACTTCCAACTCGTCTCAAAATATTTCAATGTCTCTCTTATAAGAAAGGAAGATCAAATCTCCTGTATGTCCTTTTCTTATCTTTGGGCTACCACACACCCTTCAAGTCTTTAACATTGACCTCACTTTTCTTATACATTCCCTTTTCCTTTATGGCCTGCTTAGTAAAATTTACTAACAATTTTTGTTGATACCAGAGATTTGGGATGCACTACAAGCAGCTGCTGAAGCCGAGCTATCGCTTGCGCAAGCAATTGTAGACAGTGCTGGAGTCATCGTTCAAAATGCAGATTTAACAATCTGTTACGATGAGAGAGGTCGGTCCACACCATTTCTTCATTTAAGAAATTATGATATGTTATTTTAGTTTAATCATCAATATCATTTTATCATCGCCCAATCTTATTGCAGGCGCAAAATATGAACTGCCCAACTATGTTTTGAGTGAACCAACCAATTTGATTCGTGACAGTTCATAAAGAGGTGGGTGGAAATTCAAACTTCTAACCTTTTAGTTGAGATTATAATACCTTAACTAGTTGAGTTATACTCACGTTGCCTGACTATTTATGTTCTAGTTGAAATGTAATAATTATATGTATTGTATATAAATTATATAGCTTTAAATCTTATTTTGATCCTAGAAGATATTTCATTTTTGTTCCACCTTCACGTTTGCACAAAAATTATTTTAGTCATTAACATTGATTATTTAATACAAATACATCATTTCCTCATTTTCTGTCATCTTTTACAGAGCTGATCGATTTAATGCATTCATTGCTTTCACTTGGGCTTCCTCTAACTTCCTGTAAGTTGCTTTTCTCAAAAGGGGTGCAACGTCGCTTTTCACATTTTTTGTAAAAAAAAAAAAAAATCAAAGAAAGGGGGAAAACCCCCTTCCTGCCAGTTTAGCAGTGTCATAAATTACTTGATTACTTGTATAAATAAAGATTCGATGTAGAATTACTGAAGTTTGAAGCACAAAGATTGAATGTGGTATAGGAAAAAAAACAATATTGTGAGG

mRNA sequence

ACTAATTACTTATTTGCTTAAATTCAATATTCGTCTGAGCTTCTTCTTCTTCTTCCTCTACAAAAAGCTTCTTCTTCAGCTCTGCAAAATTCTTCCGTTTCAACTTTCGACGGAATTTCTGCTTTTCTCTGGCTTAATCTTTCTCTCTATCTACAGAAATTGAGGCTTGCGTTCAAGCAAAGCGCAATGGGCTGTGCTGGATCGTCGCAGACCAACGGAGACGGATCCATAAAGAAGATACGCAAGCCAAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCATGCAACTACGGGATGAGTTTTGGGATACTGCACCTCACTATGGTGGTCGAAAAGAGATTTGGGATGCACTACAAGCAGCTGCTGAAGCCGAGCTATCGCTTGCGCAAGCAATTGTAGACAGTGCTGGAGTCATCGTTCAAAATGCAGATTTAACAATCTGTTACGATGAGAGAGGCGCAAAATATGAACTGCCCAACTATGTTTTGAGTGAACCAACCAATTTGATTCGTGACAGTTCATAAAGAGAGCTGATCGATTTAATGCATTCATTGCTTTCACTTGGGCTTCCTCTAACTTCCTGTAAGTTGCTTTTCTCAAAAGGGGTGCAACGTCGCTTTTCACATTTTTTGTAAAAAAAAAAAAAAATCAAAGAAAGGGGGAAAACCCCCTTCCTGCCAGTTTAGCAGTGTCATAAATTACTTGATTACTTGTATAAATAAAGATTCGATGTAGAATTACTGAAGTTTGAAGCACAAAGATTGAATGTGGTATAGGAAAAAAAACAATATTGTGAGG

Coding sequence (CDS)

ATGGGCTGTGCTGGATCGTCGCAGACCAACGGAGACGGATCCATAAAGAAGATACGCAAGCCAAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCATGCAACTACGGGATGAGTTTTGGGATACTGCACCTCACTATGGTGGTCGAAAAGAGATTTGGGATGCACTACAAGCAGCTGCTGAAGCCGAGCTATCGCTTGCGCAAGCAATTGTAGACAGTGCTGGAGTCATCGTTCAAAATGCAGATTTAACAATCTGTTACGATGAGAGAGGCGCAAAATATGAACTGCCCAACTATGTTTTGAGTGAACCAACCAATTTGATTCGTGACAGTTCATAA

Protein sequence

MGCAGSSQTNGDGSIKKIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQAAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS
Homology
[Close]
BLAST of Tan0017930 vs. ExPASy Swiss-Prot
Match: Q4V8W7 (Ubiquitin domain-containing protein 1 OS=Danio rerio OX=7955 GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-23
Identity = 59/119 (49.58%), Postives = 74/119 (62.18%), Query Frame = 0 

Query: 2   GCAGSSQTNGDGSIKKIRKPKP-WKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQ 61
           G    +Q    G  + ++K KP WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+
Sbjct: 14  GRGSRTQRKRGGRNEPLKKDKPKWKSDYPMTEGQLRSKRDEFWDTAPAFEGRKEIWDALK 73

Query: 62  AAAEA----ELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 116
           AAA A    +  LAQAIVD A + + +  LT CYDE G +Y+LP Y L+ P NLI + S
Sbjct: 74  AAAVALECSDHELAQAIVDGANITLPHGSLTECYDELGNRYQLPVYCLAPPVNLISERS 132

[Close]
BLAST of Tan0017930 vs. ExPASy Swiss-Prot
Match: Q6DG43 (Ubiquitin domain-containing protein 2 OS=Danio rerio OX=7955 GN=ubtd2 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-23
Identity = 59/123 (47.97%), Postives = 78/123 (63.41%), Query Frame = 0 

Query: 4   AGSSQTNGDGS------IKKIRKPKP-WKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIW 63
           +GS   N DG+       + +++ KP WK   P+T  QL   RDEFWDTAP + GRKEIW
Sbjct: 12  SGSLNENSDGTGVALGRNQPLKREKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIW 71

Query: 64  DALQAAAEA----ELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIR 116
           DAL+AAA+A    +  LAQAI+D A + + +  LT CYDE G +Y+LP Y LS P N+I 
Sbjct: 72  DALKAAAQAFESNDHELAQAIIDGASITLPHGALTECYDELGNRYQLPVYCLSPPVNMIE 131

[Close]
BLAST of Tan0017930 vs. ExPASy Swiss-Prot
Match: Q640W6 (Ubiquitin domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.8e-23
Identity = 59/123 (47.97%), Postives = 77/123 (62.60%), Query Frame = 0 

Query: 4   AGSSQTNGDGS------IKKIRKPKP-WKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIW 63
           +GS   N DG+       + ++K KP WK   P+T  QL   RDEFWDTAP + GRKEIW
Sbjct: 12  SGSLNENSDGTGVALGRNQPLKKDKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIW 71

Query: 64  DALQAAAEA----ELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIR 116
           DAL+AAA A    +  LAQAI+D A + + +  LT CYDE G +Y+LP Y L+ P N+I 
Sbjct: 72  DALKAAAHAFESNDHELAQAIIDGASITLPHGALTECYDELGNRYQLPVYCLAPPINMIE 131

[Close]
BLAST of Tan0017930 vs. ExPASy Swiss-Prot
Match: Q6PGH0 (Ubiquitin domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ubtd2 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.8e-23
Identity = 59/123 (47.97%), Postives = 77/123 (62.60%), Query Frame = 0 

Query: 4   AGSSQTNGDGS------IKKIRKPKP-WKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIW 63
           +GS   N DG+       + ++K KP WK   P+T  QL   RDEFWDTAP + GRKEIW
Sbjct: 12  SGSLNENSDGTGVALGRNQPLKKEKPKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIW 71

Query: 64  DALQAAAEA----ELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIR 116
           DAL+AAA A    +  LAQAI+D A + + +  LT CYDE G +Y+LP Y L+ P N+I 
Sbjct: 72  DALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPINMIE 131

[Close]
BLAST of Tan0017930 vs. ExPASy Swiss-Prot
Match: Q6GL38 (Ubiquitin domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=ubtd1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.6e-23
Identity = 58/117 (49.57%), Postives = 73/117 (62.39%), Query Frame = 0 

Query: 4   AGSSQTNGDGSIKKIRKPKP-WKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQAA 63
           A   Q    G  + ++K +P WK   P+T  QL   RDEFWDTAP + GRKEIWDAL+AA
Sbjct: 19  ASGQQRKRAGRNEPLKKERPRWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAA 78

Query: 64  AEA----ELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 116
           A A    +  LAQAIVD A + + +  LT CYDE G +Y+LP Y L+ P NLI + S
Sbjct: 79  AFAVEANDHELAQAIVDGASITLPHGSLTECYDELGTRYQLPVYCLAPPVNLIMERS 135

[Close]
BLAST of Tan0017930 vs. NCBI nr
Match: XP_038882682.1 (ubiquitin domain-containing protein 2-like [Benincasa hispida] >XP_038882691.1 ubiquitin domain-containing protein 2-like [Benincasa hispida] >XP_038882701.1 ubiquitin domain-containing protein 2-like [Benincasa hispida] >XP_038882708.1 ubiquitin domain-containing protein 2-like [Benincasa hispida])

HSP 1 Score: 233.8 bits (595), Expect = 7.4e-58
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0 

Query: 1   MGCAGSSQTNGDGSIKKIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQ 60
           MGCAGSSQTNGDGSIKKIRKPK WKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDAL+
Sbjct: 1   MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 116
           AAAEAELSLAQAI+DSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 61  AAAEAELSLAQAIIDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]
BLAST of Tan0017930 vs. NCBI nr
Match: XP_022931411.1 (ubiquitin domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 230.3 bits (586), Expect = 8.2e-57
Identity = 109/115 (94.78%), Postives = 114/115 (99.13%), Query Frame = 0 

Query: 1   MGCAGSSQTNGDGSIKKIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQ 60
           MGCAGSSQTNGDGSIKKIRKPK WKHPQPITRSQL+QLR+EFWDTAPHYGGRKEIWDAL+
Sbjct: 1   MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 116
           AAAEAELSLAQAI+DSAGVI+QNADLTICYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 61  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]
BLAST of Tan0017930 vs. NCBI nr
Match: XP_022142761.1 (ubiquitin domain-containing protein 1-like [Momordica charantia] >XP_022142762.1 ubiquitin domain-containing protein 1-like [Momordica charantia])

HSP 1 Score: 228.0 bits (580), Expect = 4.1e-56
Identity = 107/115 (93.04%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 1   MGCAGSSQTNGDGSIKKIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQ 60
           MGCAGSS+TNGDGS K+IRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGR EIWDAL+
Sbjct: 1   MGCAGSSRTNGDGSTKRIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALR 60

Query: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 116
           AAAEAE SLAQAI+DSAGVIVQNADLT+CYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 61  AAAEAEXSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]
BLAST of Tan0017930 vs. NCBI nr
Match: XP_023552879.1 (ubiquitin domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.6 bits (579), Expect = 5.3e-56
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0 

Query: 1   MGCAGSSQTNGDGSIKKIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQ 60
           MGCAGSSQTNGDGSIKKI KPK WKHPQPITRSQL+QLR+EFWDTAPHYGGRKEIWDAL+
Sbjct: 1   MGCAGSSQTNGDGSIKKIGKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 116
           AAAEAELSLAQAI+DSAGVI+QNADLTICYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 61  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]
BLAST of Tan0017930 vs. NCBI nr
Match: XP_004137230.1 (ubiquitin domain-containing protein 1 [Cucumis sativus] >KGN53573.1 hypothetical protein Csa_014886 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 7.0e-56
Identity = 110/115 (95.65%), Postives = 111/115 (96.52%), Query Frame = 0 

Query: 1   MGCAGSSQTNGDGSIKKIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQ 60
           MGCAGSSQT  DGSIKKIRKPK WKHPQPITRSQL QLRDEFWDTAPHYGGRKEIWDAL+
Sbjct: 1   MGCAGSSQTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 116
           AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]
BLAST of Tan0017930 vs. ExPASy TrEMBL
Match: A0A6J1ETK8 (ubiquitin domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111437602 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.0e-57
Identity = 109/115 (94.78%), Postives = 114/115 (99.13%), Query Frame = 0 

Query: 1   MGCAGSSQTNGDGSIKKIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQ 60
           MGCAGSSQTNGDGSIKKIRKPK WKHPQPITRSQL+QLR+EFWDTAPHYGGRKEIWDAL+
Sbjct: 1   MGCAGSSQTNGDGSIKKIRKPKSWKHPQPITRSQLVQLREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 116
           AAAEAELSLAQAI+DSAGVI+QNADLTICYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 61  AAAEAELSLAQAIIDSAGVIIQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]
BLAST of Tan0017930 vs. ExPASy TrEMBL
Match: A0A6J1CN58 (ubiquitin domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC111012801 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.0e-56
Identity = 107/115 (93.04%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 1   MGCAGSSQTNGDGSIKKIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQ 60
           MGCAGSS+TNGDGS K+IRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGR EIWDAL+
Sbjct: 1   MGCAGSSRTNGDGSTKRIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRNEIWDALR 60

Query: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 116
           AAAEAE SLAQAI+DSAGVIVQNADLT+CYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 61  AAAEAEXSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]
BLAST of Tan0017930 vs. ExPASy TrEMBL
Match: A0A0A0KVJ9 (UBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G083480 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.4e-56
Identity = 110/115 (95.65%), Postives = 111/115 (96.52%), Query Frame = 0 

Query: 1   MGCAGSSQTNGDGSIKKIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQ 60
           MGCAGSSQT  DGSIKKIRKPK WKHPQPITRSQL QLRDEFWDTAPHYGGRKEIWDAL+
Sbjct: 1   MGCAGSSQTKADGSIKKIRKPKSWKHPQPITRSQLTQLRDEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 116
           AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS
Sbjct: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 115

[Close]
BLAST of Tan0017930 vs. ExPASy TrEMBL
Match: A0A6J1J725 (ubiquitin domain-containing protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481944 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 5.7e-56
Identity = 107/115 (93.04%), Postives = 110/115 (95.65%), Query Frame = 0 

Query: 1   MGCAGSSQTNGDGSIKKIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQ 60
           MGC GSSQTNGDGS KKIRKPKPWKHPQPITRSQL QLRDEFWDTAPHYGGR EIWDAL+
Sbjct: 1   MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNEIWDALR 60

Query: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 116
           AAAEAELSLAQAI+DSAGVIVQNADLT+CYDERGAKYELP YVLSEPTNLIRDSS
Sbjct: 61  AAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPKYVLSEPTNLIRDSS 115

[Close]
BLAST of Tan0017930 vs. ExPASy TrEMBL
Match: A0A6J1FQA3 (ubiquitin domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111447800 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 5.7e-56
Identity = 107/115 (93.04%), Postives = 110/115 (95.65%), Query Frame = 0 

Query: 1   MGCAGSSQTNGDGSIKKIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQ 60
           MGC GSSQTNGDGS KKIRKPKPWKHPQPITRSQL QLRDEFWDTAPHYGGR EIWDAL+
Sbjct: 1   MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNEIWDALR 60

Query: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRDSS 116
           AAAEAELSLAQAI+DSAGVIVQNADLT+CYDERGAKYELP YVLSEPTNLIRDSS
Sbjct: 61  AAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGAKYELPKYVLSEPTNLIRDSS 115

[Close]
BLAST of Tan0017930 vs. TAIR 10
Match: AT1G53400.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 204.5 bits (519), Expect = 4.5e-53
Identity = 93/110 (84.55%), Postives = 105/110 (95.45%), Query Frame = 0 

Query: 1   MGCAGSSQTNGDGSIKKIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQ 60
           MGCAGS+Q+  DGS+KKIRKPKPWKH QPIT+++LM+LR+EFWDTAPHYGGRKEIWDAL+
Sbjct: 1   MGCAGSTQSQADGSVKKIRKPKPWKHTQPITKAELMKLREEFWDTAPHYGGRKEIWDALR 60

Query: 61  AAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNL 111
           AAAEA++SLAQAIVDSAGVIVQN DLT+CYDERGAKYELP YVLSEPTNL
Sbjct: 61  AAAEADISLAQAIVDSAGVIVQNTDLTVCYDERGAKYELPKYVLSEPTNL 110

[Close]
BLAST of Tan0017930 vs. TAIR 10
Match: AT5G45740.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 179.9 bits (455), Expect = 1.2e-45
Identity = 83/115 (72.17%), Postives = 98/115 (85.22%), Query Frame = 0 

Query: 1   MGCAGSSQTNGDGSI--KKIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDA 60
           MGC GSSQ   +G    KKI KPKPW H +PITR+QL  +R+EFWDT+PHYGG++EIW+A
Sbjct: 1   MGCIGSSQARNEGGAKRKKIMKPKPWAHTEPITRAQLTNMREEFWDTSPHYGGQREIWEA 60

Query: 61  LQAAAEAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLIRD 114
           L+AAAEA+L LAQ IVDSAGVIVQN DLT+C+DERGA+YELP YVLSEPTNLIR+
Sbjct: 61  LRAAAEADLKLAQTIVDSAGVIVQNRDLTLCWDERGARYELPRYVLSEPTNLIRE 115

[Close]
BLAST of Tan0017930 vs. TAIR 10
Match: AT1G16960.1 (Ubiquitin domain-containing protein )

HSP 1 Score: 170.2 bits (430), Expect = 9.4e-43
Identity = 80/112 (71.43%), Postives = 98/112 (87.50%), Query Frame = 0 

Query: 1   MGCAGSSQTNGDGSIKKIRKPKPWKHPQPITRSQLMQLRDEFWDTAPHYGGRKEIWDALQ 60
           MGC+ SS+T  +G  +KIR+PK WKHPQPI+R +L Q+R+EFWDTAPHYGG+KEIWDAL+
Sbjct: 1   MGCS-SSRTIAEGKKEKIRRPKTWKHPQPISRDELTQMREEFWDTAPHYGGKKEIWDALR 60

Query: 61  AAAEA-ELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPNYVLSEPTNLI 112
           AAAE  +LSLAQ I++SAGVIVQN DLTICYDE+G+KYELP YVL +P+NLI
Sbjct: 61  AAAEEDDLSLAQTILESAGVIVQNTDLTICYDEKGSKYELPKYVLRDPSNLI 111

The following BLAST results are available for this feature:
BLAST of Tan0017930 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q4V8W71.2e-2349.58Ubiquitin domain-containing protein 1 OS=Danio rerio OX=7955 GN=ubtd1 PE=2 SV=1[more]
Q6DG431.2e-2347.97Ubiquitin domain-containing protein 2 OS=Danio rerio OX=7955 GN=ubtd2 PE=2 SV=1[more]
Q640W62.8e-2347.97Ubiquitin domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=ubtd1 PE=2 SV... [more]
Q6PGH02.8e-2347.97Ubiquitin domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ubtd2 PE=2 SV=... [more]
Q6GL383.6e-2349.57Ubiquitin domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=ubtd1 PE=... [more]
BLAST of Tan0017930 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038882682.17.4e-5897.39ubiquitin domain-containing protein 2-like [Benincasa hispida] >XP_038882691.1 u... [more]
XP_022931411.18.2e-5794.78ubiquitin domain-containing protein 2-like [Cucurbita moschata][more]
XP_022142761.14.1e-5693.04ubiquitin domain-containing protein 1-like [Momordica charantia] >XP_022142762.1... [more]
XP_023552879.15.3e-5693.91ubiquitin domain-containing protein 2-like [Cucurbita pepo subsp. pepo][more]
XP_004137230.17.0e-5695.65ubiquitin domain-containing protein 1 [Cucumis sativus] >KGN53573.1 hypothetical... [more]
BLAST of Tan0017930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ETK84.0e-5794.78ubiquitin domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1CN582.0e-5693.04ubiquitin domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A0A0KVJ93.4e-5695.65UBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G083480 PE=4 SV... [more]
A0A6J1J7255.7e-5693.04ubiquitin domain-containing protein 1-like isoform X2 OS=Cucurbita maxima OX=366... [more]
A0A6J1FQA35.7e-5693.04ubiquitin domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
BLAST of Tan0017930 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G53400.14.5e-5384.55Ubiquitin domain-containing protein [more]
AT5G45740.11.2e-4572.17Ubiquitin domain-containing protein [more]
AT1G16960.19.4e-4371.43Ubiquitin domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038169DC-UbP/UBTD2, N-terminal domain superfamilyGENE3D1.20.225.20coord: 31..104
e-value: 6.1E-27
score: 95.7
IPR032752DC-UbP/UBTD2, N-terminal domainPFAMPF16455UBDcoord: 16..113
e-value: 3.9E-35
score: 120.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR13609:SF25BINDING PROTEIN, PUTATIVE-RELATEDcoord: 1..112
IPR039869Ubiquitin domain-containing protein 1/2PANTHERPTHR13609UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATEDcoord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0017930.1Tan0017930.1mRNA
Tan0017930.2Tan0017930.2mRNA