Tan0016927 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCGCGAGTGCTAAAACCCTTGCTGAAGGCGTACGCTCGATCCTTTGTTCCTCTAGTCTTTGCGGCCGCCGCTACTGTAATCGGAGCGCTTGAATCTTGAAGATGAAGGTTCGACCCGTAGATTTATCGTCTTCCTCACTTATTTCTCTAGTTTTACTCCAATGCTAACTTTCGTGTTTACAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGACCAGAAACTGTTAGCTTTCAAATACCCTTATTCTTCAGTCTGTTGTCTGAATCGTGAATGTGCATTCTGTGGATGAATAGTTTTGTCCATCTTCAGTCGAATGTTCATATAGCTCCATGGTCTAATGGAACGTTAATAAGTACATCTTTGGGTTTCCTTCGACTGAGGTTTACCTAAGCATGGCTTCGTATGTTTAGATCTTTGATTCCAATACTAAGACTTTCTGGATTTGGGGATTTGAGATGTATGATAAATAAATGGCTCTCTTTTGGTTAGTAGAGGAGTGTTGAAATCGTTTGTTCGATATGTTTGCAGTTTAGATTTTTTAGTTGACTTTCAGCATTACTATGTTGGATTTCAAATAGCTTATATATTGACGTCGCTAGACATCTATCTGCAATACTTGCATTGCTAGTCTGTGTTTTTTTCCACTTATTTTTTATTTATTTTTTTTTTGTGAAGCGGCAGTTTCTCCGAGCAACAATATTTTATGAGTTTTAAGCGAGCAAAAAGAAAGATTTTAGCTATTCCTGTTTTGTTTGTTTGTATGTTTGTCATCATTTTTACTCTAGTTTAAATTTCTTCATGGACTAAAATTATCCCCGGTCGTTGTTTAGCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTCGGAGAGGTATGTGTGCTCTTCTGTCATCCAATGAATAAAATCTTAGTTCCTAGTTGCTCTCTGAGTTTACTGATGGAGGATTTTCCTCTTTTCAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGATTCCCAATGAAACAGGGGGTTTTGACTCCTGGCCGCGTCCGTCTCTTACTACACCGAGGTTTGTGGAACTGTTTATACTATTGAATGGTTAACCCATTCAATCATATTTGTGGCCTTTATTGTTTGTTTTCAATAATTTATAGCACTATCATAAGTAATACAAGCATGTGTTTGGCTTTTGTGGTCAGGTACCCCTTGTTTCCGTGGTTATGGTAGGCGTAATGGAGAGCGCAGGAGGAAGTCTGTGCGTGGATGCATCGTCAGCCAAGACCTTTCTGTTCTGAATCTGGTTATTGTTAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCTAAAAGGGCATCCAAGATTCGCAAACTTTTCAATTTGTCAAAGGAGGATGATGTTCGAAAGTATATTAACACATATCGTAGATCATTCACCACAAAATCTGGTATGGTCAACAATTGCTTTTGTGTTTTTTAAACCTGTCTTAATAAACTAAGTTAGTGGCTGTGGGTGGGGAGGTTTAAAGGACAAATTATTCAATGAGGCCGCCACAATGTCGTTGTCTCATAGTGACAGTTGGATGTGGATCCAATAATTTTTATGCGCCCTAATAATCGTTGGATATAAAGTCGAAATACTTCTCTCTCTTCATCCAACGGTGAAAAATTGTCGGCCACATTGTGGCAGCCTTCACCGAATAATTTCTCGGTTTAAAGGGGTTGTGATTTTCCAACAGTGACTGATAGATGATGAAGTACTGGTCGAGGTTTAATACTTTTTTCATATAGTTGGATAGTTGGATGGATGCATTCCTATGATAACCTATGCTTTGTGTAATCCCAACTTTCTAGATGAGCCTCCATTTGACGTTGGATTAAATTGTTGTTCAATATTGCTGCTGTTTGCACAAGTACATGGATTGTGCTTAATAAAATTGAAACACGATAATTATAAGGGTTAACAATTATGCTGGTCACCTATCTAGGATTTAATATTCTACTAGTTAGCTTCTACAAGTTAGCTTGGCAACCAAATGTAGTAGGGTGAGACGATTGTCCTATGAGAATAGTTGAAGTGTATGCAAGTTAGTCTGGATGCTCATGAATATACAAACAAAATAACAAAAGTGTTAGATTAGTCCCCCAGTCTCATTTTGGCGATTAATAGAATTTTATTTTATACAAATTGTTTCTTCAGTTCCATTTATTCTGGAATCAAGTTTCTGATGATTATTTGATTGACAGGCAAAAAGGTTAGCAAAGCCCCCAAGATTCAGAGGTTGGTCACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGGGAACGTCGAAGCGAGAGTTTGGCCAAGAAGAGGTCCAGACTCTCTGCTGCTTCAAAGCCGTCCATTGCTGCTTAGTTTGTTCACACTATTTATGTCAGCGTTTTATTATCTTTATATTTCCATCTTGTTTTGCTTTTAAAAGAATGTACTTTTTGCGGCTGCATATATGAGATATGGAATGTTTTGGTATTTTTGGTGGTGTTAGCCCTGAACAAGTCTTTCTTCTATGTTTTTGTTATTTTATTTCCTTTGTTTAGGGATTCATGTTAGCAGTAAATTGTACGCTTTTTCTAACTAATAGATAAAGATATAGACCAAAACCTTCTTCACCCAAGCAAGCCGAGAGGATTTCCTCCATTCACTCTTTATTCATCTTTTCACTTGTATTGACTTATTGACAGTCATTTCTTGACATACTTCATATCTTATGAAAGTCCAGATCCCAGAG GGCGCGAGTGCTAAAACCCTTGCTGAAGGCGTACGCTCGATCCTTTGTTCCTCTAGTCTTTGCGGCCGCCGCTACTGTAATCGGAGCGCTTGAATCTTGAAGATGAAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGACCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTCGGAGAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGATTCCCAATGAAACAGGGGGTTTTGACTCCTGGCCGCGTCCGTCTCTTACTACACCGAGGTACCCCTTGTTTCCGTGGTTATGGTAGGCGTAATGGAGAGCGCAGGAGGAAGTCTGTGCGTGGATGCATCGTCAGCCAAGACCTTTCTGTTCTGAATCTGGTTATTGTTAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCTAAAAGGGCATCCAAGATTCGCAAACTTTTCAATTTGTCAAAGGAGGATGATGTTCGAAAGTATATTAACACATATCGTAGATCATTCACCACAAAATCTGGCAAAAAGGTTAGCAAAGCCCCCAAGATTCAGAGGTTGGTCACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGGGAACGTCGAAGCGAGAGTTTGGCCAAGAAGAGGTCCAGACTCTCTGCTGCTTCAAAGCCGTCCATTGCTGCTTAGTTTGTTCACACTATTTATGTCAGCGTTTTATTATCTTTATATTTCCATCTTGTTTTGCTTTTAAAAGAATGTACTTTTTGCGGCTGCATATATGAGATATGGAATGTTTTGGTATTTTTGGTGGTGTTAGCCCTGAACAAGTCTTTCTTCTATGTTTTTGTTATTTTATTTCCTTTGTTTAGGGATTCATGTTAGCAGTAAATTGTACGCTTTTTCTAACTAATAGATAAAGATATAGACCAAAACCTTCTTCACCCAAGCAAGCCGAGAGGATTTCCTCCATTCACTCTTTATTCATCTTTTCACTTGTATTGACTTATTGACAGTCATTTCTTGACATACTTCATATCTTATGAAAGTCCAGATCCCAGAG ATGAAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGACCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTCGGAGAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGATTCCCAATGAAACAGGGGGTTTTGACTCCTGGCCGCGTCCGTCTCTTACTACACCGAGGTACCCCTTGTTTCCGTGGTTATGGTAGGCGTAATGGAGAGCGCAGGAGGAAGTCTGTGCGTGGATGCATCGTCAGCCAAGACCTTTCTGTTCTGAATCTGGTTATTGTTAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCTAAAAGGGCATCCAAGATTCGCAAACTTTTCAATTTGTCAAAGGAGGATGATGTTCGAAAGTATATTAACACATATCGTAGATCATTCACCACAAAATCTGGCAAAAAGGTTAGCAAAGCCCCCAAGATTCAGAGGTTGGTCACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGGGAACGTCGAAGCGAGAGTTTGGCCAAGAAGAGGTCCAGACTCTCTGCTGCTTCAAAGCCGTCCATTGCTGCTTAG MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYINTYRRSFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA Homology
BLAST of Tan0016927 vs. ExPASy Swiss-Prot
Match: Q9M3V8 (40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 1.8e-123 Identity = 228/243 (93.83%), Postives = 236/243 (97.12%), Query Frame = 0
BLAST of Tan0016927 vs. ExPASy Swiss-Prot
Match: P51430 (40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3) HSP 1 Score: 434.9 bits (1117), Expect = 6.2e-121 Identity = 224/249 (89.96%), Postives = 237/249 (95.18%), Query Frame = 0
BLAST of Tan0016927 vs. ExPASy Swiss-Prot
Match: O48549 (40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2) HSP 1 Score: 433.7 bits (1114), Expect = 1.4e-120 Identity = 224/250 (89.60%), Postives = 238/250 (95.20%), Query Frame = 0
BLAST of Tan0016927 vs. ExPASy Swiss-Prot
Match: P29345 (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV=2) HSP 1 Score: 318.5 bits (815), Expect = 6.5e-86 Identity = 177/204 (86.76%), Postives = 185/204 (90.69%), Query Frame = 0
BLAST of Tan0016927 vs. ExPASy Swiss-Prot
Match: P62753 (40S ribosomal protein S6 OS=Homo sapiens OX=9606 GN=RPS6 PE=1 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 4.2e-77 Identity = 158/241 (65.56%), Postives = 190/241 (78.84%), Query Frame = 0
BLAST of Tan0016927 vs. NCBI nr
Match: XP_022948606.1 (40S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal protein S6 [Cucurbita maxima] >XP_023540275.1 40S ribosomal protein S6 [Cucurbita pepo subsp. pepo] >KAG6597045.1 40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028519.1 40S ribosomal protein S6 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 474.9 bits (1221), Expect = 4.1e-130 Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Tan0016927 vs. NCBI nr
Match: KAA0065138.1 (40S ribosomal protein S6-like [Cucumis melo var. makuwa]) HSP 1 Score: 474.6 bits (1220), Expect = 5.4e-130 Identity = 247/249 (99.20%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Tan0016927 vs. NCBI nr
Match: XP_004133785.1 (40S ribosomal protein S6 [Cucumis sativus] >KGN56379.1 hypothetical protein Csa_010258 [Cucumis sativus]) HSP 1 Score: 473.8 bits (1218), Expect = 9.2e-130 Identity = 247/249 (99.20%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Tan0016927 vs. NCBI nr
Match: XP_022962357.1 (40S ribosomal protein S6-like [Cucurbita moschata] >XP_023547004.1 40S ribosomal protein S6-like [Cucurbita pepo subsp. pepo] >KAG6598696.1 40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029638.1 40S ribosomal protein S6 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 473.8 bits (1218), Expect = 9.2e-130 Identity = 247/249 (99.20%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Tan0016927 vs. NCBI nr
Match: XP_038886740.1 (40S ribosomal protein S6 [Benincasa hispida]) HSP 1 Score: 472.6 bits (1215), Expect = 2.1e-129 Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of Tan0016927 vs. ExPASy TrEMBL
Match: A0A6J1ICI3 (40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111473607 PE=3 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 2.0e-130 Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Tan0016927 vs. ExPASy TrEMBL
Match: A0A6J1G9P2 (40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111452228 PE=3 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 2.0e-130 Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Tan0016927 vs. ExPASy TrEMBL
Match: A0A5A7VBY0 (40S ribosomal protein S6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004730 PE=3 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 2.6e-130 Identity = 247/249 (99.20%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Tan0016927 vs. ExPASy TrEMBL
Match: A0A0A0L5R5 (40S ribosomal protein S6 OS=Cucumis sativus OX=3659 GN=Csa_3G118140 PE=3 SV=1) HSP 1 Score: 473.8 bits (1218), Expect = 4.5e-130 Identity = 247/249 (99.20%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Tan0016927 vs. ExPASy TrEMBL
Match: A0A6J1HCI6 (40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111462827 PE=3 SV=1) HSP 1 Score: 473.8 bits (1218), Expect = 4.5e-130 Identity = 247/249 (99.20%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of Tan0016927 vs. TAIR 10
Match: AT5G10360.1 (Ribosomal protein S6e ) HSP 1 Score: 434.9 bits (1117), Expect = 4.4e-122 Identity = 224/249 (89.96%), Postives = 237/249 (95.18%), Query Frame = 0
BLAST of Tan0016927 vs. TAIR 10
Match: AT4G31700.1 (ribosomal protein S6 ) HSP 1 Score: 433.7 bits (1114), Expect = 9.9e-122 Identity = 224/250 (89.60%), Postives = 238/250 (95.20%), Query Frame = 0
BLAST of Tan0016927 vs. TAIR 10
Match: AT5G10360.2 (Ribosomal protein S6e ) HSP 1 Score: 320.5 bits (820), Expect = 1.2e-87 Identity = 179/249 (71.89%), Postives = 189/249 (75.90%), Query Frame = 0
BLAST of Tan0016927 vs. TAIR 10
Match: AT4G31700.2 (ribosomal protein S6 ) HSP 1 Score: 309.7 bits (792), Expect = 2.1e-84 Identity = 166/188 (88.30%), Postives = 177/188 (94.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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