Tan0016522 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAGAGAATGATTGAGAAAATCGTCGTGTTATTGTACGTTTTACTCTCTCCTTCTTCAATGGCGGGGACCCGCTTTTGTCTGTTACCTTCATCATTCCCCAGCTTCGTTGGCTTTCATTCTTTATCCTTATTTTAATTCCTTCCACTCCCATTTCCCCATCTTCGATTTTTCGAGTTCTTTTTTTTTCCTCTTCTTTTCATTTTGTTCTTCACTTCTTCTTTGTGTTCTTCGTTCTTCTGCTTCTCGGGCTCTTGTTGATTTGCTCCAAATGAAAGATTTCGATGGTTTTGAGCTGTAATTGTTTCTGGGTTTCGGTTTCTCTGTTTTGTTCTGTGTTGAATCTTTGACTGTCTTCTTCATTGCTACTGGGTTTTGGTTGATTTTGAGTTGAAATTGGTCAGGATTTGAGAATTTCAGTGGGTTTTATTTGTTTGTACTCGCTTTTCTGTAATGGGTAATTGTTTATTCATTTGCTGAAACTGAGAAACTCCATTGGTTCTGAGTTGAAATCAGTGGGTGTTTGGGAATTTTAGCAAGTTTTTCTCCGTTCTTCTTCATCTACTTCACTTTTCTGCAATTGGGTAATTCTGATACATTTGATGAATCTGAGGAACTCCATTGATTCTGGGTTGAAATCGATGTGGGTTTGATGATTTTAGCAAGTTTTTCTCTCCATTTCTTCTTCATCTTCCTTACTTCTCTGCAACATGGGTTCTGATTCATATTCTGAAACAGAGAAACTTGATGGATTTTGAGTTCAAATTCTATTGGGCTTGAACCTCAGTTCCAGTAAGTTTTCATCATTTCTCCTCTTTGTTGTCTCTGTTTTTCTGCAACTGGCCGGATTCTGATTTTCAATTGAAATCTTCGTGGGTTTGATTCTCAATTCAAATTCCAGCAAGTTTTCACCAGAATTTCAGTGGGCTTTCTGATTTTGAGTCAAAAATCCTCTTGGTTTTTGAGTCTTAATTCCAATCCTCTTTCTCAATGGCCGGAATGTTGCCCGGAGTTGAATGCGCCAGACGGCGGCGGTTCCACCAGAGCATAACGTCATCGGACTCGCCGTCCACGGCGGCGAAATTAGGATCCACAAGAAGGCCTTCCTTCTGTTTGTACACTAGCAACCGTGATTTTCACCTCACTTCGTCATCTTCTTCACAGGTATTAAAGAGAGAAAAAAAAATCTAGAAATTCCATATACATATACTTGGAATTTTCTGTTTGTTTCCTGGGAAAATTTGGATGAATGATTTGAATTTTGTTTCAAACTTTAAGCAACGGAGCTCTTCGAATCAAGCTTATCAGAACGAGAAGCTTGGCGAAGTTGCAAGAGAAGCTAAGGAACGGTTGGATGAAAGGTTGAGGACGCGCAGAAAACCTGAAACTCCAAGGTAATTTCTTCGTGAACCACCTTATCTCTTATGAATTTAATTAATTGTTCTTCAAATCTAATTTTCAAGATTTTTTTTTCAGTTATTCTTACTTAAAAAAAACGTTGTTTAAAATTTGTGGATAAAAAACGACATATTTGTATATGTTTTAAATTTTATAAGTTTGAGATAAATTTAATTATATCAAGATGTCTAATACTTCTCTTCACTTAGGGGTGTACAAGTAACCCGATAACCCGACTAATTCTGATTTACCCAACCCAAACCTTAAGGGTTGGGTAGGGTTAGATTTTTTTCTTTGGGTTGGGTTAGAAGAAGTTTGAAAGAACCAAAAGTTGGTCCGGGTTTCCTGTTAGGTTTTTAGGCTCAAAGTTGACTGACCCAACCAACCCAGTTTTATATATTTTTAATTTTATTTTAATTAAATATATACTTATAAATGAATTATTTGTTAATTTCTTATGTTTTTTCTAGATTTCTAACAAAATGTTAAGATGTTATGGATTTTAAAGTTTGATATTTGAATTTTATGTGATTTTAGTTATTAATTTAAGAAAAAAAATATTTTAAATAATTTAAAAAAAATTAGGGTTACTCTCATGAATAGGGTTGGTTGGGTTGAAGGAATGACCAACACGAATTTTCGGGTTGGTCCAAAAATCTCCCTCAACCCAACCCAACCCGGCTTATGTACACCCCTTTCTTCATTTGTGGGTTTGGAAATTTGATAAAAAAACAAACAAGTGAAATCAATATTTAAATGGAGAGAAAATAACCTTCTGTACCATCTACTCTAATAACATCTTAAATCACTAATCAAATTAAAAACTTAAATTAAGAGTTTGAGGTTGTTTTAATTATATGTCTAACAGAACCCATGAGTTCTTAGTCATGAGTCATAGTTGATACCAGTTGAACTATATTCTTGTTAGCATATATCGAATATATATATATTGACCACAACGATATTTGTTGTTCGAATATCTCAACCTCTACTGTGTTAAAAAAATATTCACATAAACAATAATATAAATGTAAATGTAAAATTTTTTCGTCCATAAATTTAAAGGAACAAAAAAAAATTTTGAAGGGTTGTTTTGAAACAAACTTCAAAATTAAAGAGTTAAAATAATTTTTTTTCAAAATTACGTATAATTGAAATCAGCTTAAAGTTTTTTTTTTTTTGATAATTTAAGCCGCAAGAGAATACTACTTGGATATGCCACTTGAGAGAATTTTTTCTTGCTACTCGGATAGTTATTTATTTTTCATCTTTTATTTGTTGGTTAAAATATTTTGTTTTTGTAGTTTATTTTTTCAGAAGAATTGACCAATCAACTGAAGAAAAAATTCATGAAGAAATTGATTATAGAGAAAAACTCAACTTTATTGAACTATAATAATTTGGTTGGTTTTCATTTATATCAGCACCAAGCCTCTATTCTAGAGGAGTTAAATACATGTTTAGCAGACTATTTTATTTTAGTCCTACAATTTCTAAAATTTTCATTTTCGAGTCCTTCAAATTTTAACTGTTTTTTATTTTGTTTCTTTTAATTTTTGTAATTTTGATTTTCCTTTACTAATTTCCACTAGATTTTATGTTGTCTCTACCCTAACATCTTACTTTTTAAAGCTTATTGTGTTTTTCTGAGTTTAGTTTTTTTTTCTTCTTATCTAGGAGTACTTTCTTTTAATCCATCTGATTTTTTAGGCTTCGTTTGATAACCATTTGATTTTTTAAACTAAACCTAAAAATACTACTTAATTTTCTTATCTACTTATTCATGTTTTCAAAAATCAAGCTAAATTTTGAAAACTAAAAAAAATAGTTTTTCAAAAACTTGTTTTTTGTGTTTTGAAATTTGACTATAAGCTTAAATGATACCTCGAGAAGATGAAAATCATTGTAGGGAAGATTAAGAGAAACTATTAAAAAAACAAACATAATTATCAAAAACTAAAAATCAAATGATTATCAAACTCATTATAATTTTATGTTTTACTTTTATTTTATGTGTGTCCTTCCACTATTAAATGCTTTGTTTTACTCATTAAACTTTATGTTACAAACAAAATATATTTTTTAATCATTGAACAAAAAAACAAGACCTACAAGATTCGAATTCAAATACTCATCAGATAAATAAACAAAAAGGCAAGCGTATATTAAATGTATGTCAAATAAATTAAACGAATAAAACAATTAACCAACAAAAAAAATAAAATAGAAGTTGTAGGTTGTAGCGCTAACATAGAACAAACATGGAGAACAAAATCATCATTCAAACCTTTTAAAATACTAATCCTAAAATTATATTAAAAAACAAAGAAAAAGTAGTTGTTGCCAAAGGTACATAATTGTTGAAAACATGAAATCAAAGTTAAATTAAAATTTTGATTAATATAGTTTGAGCAATAGTTTCCAACTAATCTCTATAATTTGAGTTCAATTTTTAATTTGGTTTTTACGATTTTAAAAGTTTCAATGTGATCCTCTAGTTTCATTAAACCTCACAGATCATCCTTAAATTTAATACAATCATCTCTACATCCACTTAAAAACCTCCAACTTATTTCCTTTCATTTTTTAACTCAACCCTAAAACTTAATACAATCCGCCAACATAATGAACTAGTCAAAACAACACGAATGAATAATTCACGAGATTTTACTAAACCATAGGAGGATCTAATCAAAACTTAAGTAGAAACTAAGTTCAAGCTACAAGAATAACTAAATTTGTAATTTAAACTTAAAACAACGTCAAGATCAAAGTTGTAAAACTGGTGATGTAATTAAATTAAAGTTTTTGAGTTGATTGACGATTTAACATGATATCAGAGCAAGATCAGAGGTCCTAAGTTCGAATTATTGTAATGTCATTCTGTAGGTGAATAAGAGTTCGTTATCGAATTAAACATCGTTCTTTTTTTTTTTTTTTTTGGCATTAGGAATAGGAGTAGTAGTGAAGGAGTAGGGTTGAAGGAATCATTAGAAAAGAAAGGAATTAAGAAAGAGAAAACAAAGGGGAAAGAAGAAACACCTACAAAGAAGAGGTTCAGTTGGGGGAAGCTAATGAAATGGAAAGCCTCAGAGCAAGAAGAGTGCGCCGTTTGTCTTGAAGGGTTCAGAGCTAGCGAGCCGCTGGTCCATCTTCCATGCGCCCACAAGTTCCATTCCACCTGCTTGGTCCCTTGGCTCCAAGCCAATGACCATTGCCCTTGTTGCAGATTCCCCATTCCCTCTCAATAACAAAATCTTCCCTCTTTTTTTTTTTTTTTTTTGTTTTAACTCTTATTTATATATACGAGAAATTATTCGAGGGGATAAAATAATATGGGTAGTGATTTTATATCAGTAGATGTATGAGAGAGACACAAAAAAAATGTATGGTTTAAGTTTAACCGTGGATTCAAGAAGGGTCGGGCGCAATCCCATGGCAGCTAAATTGAATAATGTTTCTTTCCGCTCTTTTAGATTGTTTGCTTATAATTTTTCTTTTTGGGTTAAATAATCCTATTACGCTCTTAAGAGCTTGTTTGGTGGT GAAAGAGAATGATTGAGAAAATCGTCGTGTTATTGTACGTTTTACTCTCTCCTTCTTCAATGGCGGGGACCCGCTTTTGTCTGTTACCTTCATCATTCCCCAGCTTCGTTGGCTTTCATTCTTTATCCTTATTTTAATTCCTTCCACTCCCATTTCCCCATCTTCGATTTTTCGAGTTCTTTTTTTTTCCTCTTCTTTTCATTTTGTTCTTCACTTCTTCTTTGTGTTCTTCGTTCTTCTGCTTCTCGGGCTCTTGTTGATTTGCTCCAAATGAAAGATTTCGATGGTTTTGAGCTGTAATTGTTTCTGGGTTTCGGTTTCTCTGTTTTGTTCTGTGTTGAATCTTTGACTGTCTTCTTCATTGCTACTGGGTTTTGGTTGATTTTGAGTTGAAATTGGTCAGGATTTGAGAATTTCAGTGGGTTTTATTTGTTTGTACTCGCTTTTCTGTAATGGGTAATTGTTTATTCATTTGCTGAAACTGAGAAACTCCATTGGTTCTGAGTTGAAATCAGTGGGTGTTTGGGAATTTTAGCAAGTTTTTCTCCGTTCTTCTTCATCTACTTCACTTTTCTGCAATTGGGTAATTCTGATACATTTGATGAATCTGAGGAACTCCATTGATTCTGGGTTGAAATCGATAGAAACTTGATGGATTTTGAGTTCAAATTCTATTGGGCTTGAACCTCAGTTCCAGTAAGTTTTCATCATTTCTCCTCTTTGTTGTCTCTGTTTTTCTGCAACTGGCCGGATTCTGATTTTCAATTGAAATCTTCGTGGGTTTGATTCTCAATTCAAATTCCAGCAAGTTTTCACCAGAATTTCAGTGGGCTTTCTGATTTTGAGTCAAAAATCCTCTTGGTTTTTGAGTCTTAATTCCAATCCTCTTTCTCAATGGCCGGAATGTTGCCCGGAGTTGAATGCGCCAGACGGCGGCGGTTCCACCAGAGCATAACGTCATCGGACTCGCCGTCCACGGCGGCGAAATTAGGATCCACAAGAAGGCCTTCCTTCTGTTTGTACACTAGCAACCGTGATTTTCACCTCACTTCGTCATCTTCTTCACAGCAACGGAGCTCTTCGAATCAAGCTTATCAGAACGAGAAGCTTGGCGAAGTTGCAAGAGAAGCTAAGGAACGGTTGGATGAAAGGTTGAGGACGCGCAGAAAACCTGAAACTCCAAGGAATAGGAGTAGTAGTGAAGGAGTAGGGTTGAAGGAATCATTAGAAAAGAAAGGAATTAAGAAAGAGAAAACAAAGGGGAAAGAAGAAACACCTACAAAGAAGAGGTTCAGTTGGGGGAAGCTAATGAAATGGAAAGCCTCAGAGCAAGAAGAGTGCGCCGTTTGTCTTGAAGGGTTCAGAGCTAGCGAGCCGCTGGTCCATCTTCCATGCGCCCACAAGTTCCATTCCACCTGCTTGGTCCCTTGGCTCCAAGCCAATGACCATTGCCCTTGTTGCAGATTCCCCATTCCCTCTCAATAACAAAATCTTCCCTCTTTTTTTTTTTTTTTTTTGTTTTAACTCTTATTTATATATACGAGAAATTATTCGAGGGGATAAAATAATATGGGTAGTGATTTTATATCAGTAGATGTATGAGAGAGACACAAAAAAAATGTATGGTTTAAGTTTAACCGTGGATTCAAGAAGGGTCGGGCGCAATCCCATGGCAGCTAAATTGAATAATGTTTCTTTCCGCTCTTTTAGATTGTTTGCTTATAATTTTTCTTTTTGGGTTAAATAATCCTATTACGCTCTTAAGAGCTTGTTTGGTGGT ATGGCCGGAATGTTGCCCGGAGTTGAATGCGCCAGACGGCGGCGGTTCCACCAGAGCATAACGTCATCGGACTCGCCGTCCACGGCGGCGAAATTAGGATCCACAAGAAGGCCTTCCTTCTGTTTGTACACTAGCAACCGTGATTTTCACCTCACTTCGTCATCTTCTTCACAGCAACGGAGCTCTTCGAATCAAGCTTATCAGAACGAGAAGCTTGGCGAAGTTGCAAGAGAAGCTAAGGAACGGTTGGATGAAAGGTTGAGGACGCGCAGAAAACCTGAAACTCCAAGGAATAGGAGTAGTAGTGAAGGAGTAGGGTTGAAGGAATCATTAGAAAAGAAAGGAATTAAGAAAGAGAAAACAAAGGGGAAAGAAGAAACACCTACAAAGAAGAGGTTCAGTTGGGGGAAGCTAATGAAATGGAAAGCCTCAGAGCAAGAAGAGTGCGCCGTTTGTCTTGAAGGGTTCAGAGCTAGCGAGCCGCTGGTCCATCTTCCATGCGCCCACAAGTTCCATTCCACCTGCTTGGTCCCTTGGCTCCAAGCCAATGACCATTGCCCTTGTTGCAGATTCCCCATTCCCTCTCAATAA MAGMLPGVECARRRRFHQSITSSDSPSTAAKLGSTRRPSFCLYTSNRDFHLTSSSSSQQRSSSNQAYQNEKLGEVAREAKERLDERLRTRRKPETPRNRSSSEGVGLKESLEKKGIKKEKTKGKEETPTKKRFSWGKLMKWKASEQEECAVCLEGFRASEPLVHLPCAHKFHSTCLVPWLQANDHCPCCRFPIPSQ Homology
BLAST of Tan0016522 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10 Identity = 29/78 (37.18%), Postives = 42/78 (53.85%), Query Frame = 0
BLAST of Tan0016522 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 3.5e-10 Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 0
BLAST of Tan0016522 vs. ExPASy Swiss-Prot
Match: Q9C1X4 (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP32A8.03c PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.0e-09 Identity = 21/49 (42.86%), Postives = 32/49 (65.31%), Query Frame = 0
BLAST of Tan0016522 vs. ExPASy Swiss-Prot
Match: Q08D68 (E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis OX=8364 GN=znrf3 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.1e-09 Identity = 35/88 (39.77%), Postives = 46/88 (52.27%), Query Frame = 0
BLAST of Tan0016522 vs. ExPASy Swiss-Prot
Match: Q4KLR8 (E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis OX=8355 GN=znrf3 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 6.6e-09 Identity = 35/88 (39.77%), Postives = 46/88 (52.27%), Query Frame = 0
BLAST of Tan0016522 vs. NCBI nr
Match: XP_038891102.1 (probable E3 ubiquitin-protein ligase RHY1A [Benincasa hispida]) HSP 1 Score: 324.7 bits (831), Expect = 5.5e-85 Identity = 166/197 (84.26%), Postives = 174/197 (88.32%), Query Frame = 0
BLAST of Tan0016522 vs. NCBI nr
Match: KAG7030344.1 (putative E3 ubiquitin-protein ligase RHY1A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 323.6 bits (828), Expect = 1.2e-84 Identity = 168/196 (85.71%), Postives = 175/196 (89.29%), Query Frame = 0
BLAST of Tan0016522 vs. NCBI nr
Match: XP_023538036.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 313.5 bits (802), Expect = 1.3e-81 Identity = 165/196 (84.18%), Postives = 169/196 (86.22%), Query Frame = 0
BLAST of Tan0016522 vs. NCBI nr
Match: XP_023545449.1 (probable E3 ubiquitin-protein ligase RHY1A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 306.2 bits (783), Expect = 2.0e-79 Identity = 159/197 (80.71%), Postives = 165/197 (83.76%), Query Frame = 0
BLAST of Tan0016522 vs. NCBI nr
Match: XP_022965966.1 (probable E3 ubiquitin-protein ligase RHY1A isoform X1 [Cucurbita maxima] >XP_022965967.1 probable E3 ubiquitin-protein ligase RHY1A isoform X1 [Cucurbita maxima] >XP_022965968.1 probable E3 ubiquitin-protein ligase RHY1A isoform X1 [Cucurbita maxima]) HSP 1 Score: 305.8 bits (782), Expect = 2.6e-79 Identity = 161/196 (82.14%), Postives = 167/196 (85.20%), Query Frame = 0
BLAST of Tan0016522 vs. ExPASy TrEMBL
Match: A0A6J1HQI5 (probable E3 ubiquitin-protein ligase RHY1A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465688 PE=4 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79 Identity = 161/196 (82.14%), Postives = 167/196 (85.20%), Query Frame = 0
BLAST of Tan0016522 vs. ExPASy TrEMBL
Match: A0A6J1FHS8 (E3 ubiquitin-protein ligase ZNRF3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444265 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 2.2e-79 Identity = 160/196 (81.63%), Postives = 167/196 (85.20%), Query Frame = 0
BLAST of Tan0016522 vs. ExPASy TrEMBL
Match: A0A6J1G4D6 (probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita moschata OX=3662 GN=LOC111450678 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 8.2e-79 Identity = 158/196 (80.61%), Postives = 165/196 (84.18%), Query Frame = 0
BLAST of Tan0016522 vs. ExPASy TrEMBL
Match: A0A0A0LG47 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009360 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 1.1e-78 Identity = 165/202 (81.68%), Postives = 174/202 (86.14%), Query Frame = 0
BLAST of Tan0016522 vs. ExPASy TrEMBL
Match: A0A6J1KK21 (probable E3 ubiquitin-protein ligase RHY1A OS=Cucurbita maxima OX=3661 GN=LOC111493891 PE=4 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 1.5e-75 Identity = 152/194 (78.35%), Postives = 161/194 (82.99%), Query Frame = 0
BLAST of Tan0016522 vs. TAIR 10
Match: AT2G15580.1 (RING/U-box superfamily protein ) HSP 1 Score: 148.7 bits (374), Expect = 5.0e-36 Identity = 101/209 (48.33%), Postives = 129/209 (61.72%), Query Frame = 0
BLAST of Tan0016522 vs. TAIR 10
Match: AT2G15580.2 (RING/U-box superfamily protein ) HSP 1 Score: 76.3 bits (186), Expect = 3.1e-14 Identity = 53/96 (55.21%), Postives = 65/96 (67.71%), Query Frame = 0
BLAST of Tan0016522 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein ) HSP 1 Score: 66.6 bits (161), Expect = 2.5e-11 Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 0
BLAST of Tan0016522 vs. TAIR 10
Match: AT5G56340.1 (RING/U-box superfamily protein ) HSP 1 Score: 66.6 bits (161), Expect = 2.5e-11 Identity = 29/77 (37.66%), Postives = 42/77 (54.55%), Query Frame = 0
BLAST of Tan0016522 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein ) HSP 1 Score: 65.9 bits (159), Expect = 4.3e-11 Identity = 29/77 (37.66%), Postives = 42/77 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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