Tan0014202 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATTTATCCGAGCTCTTCACTTCCACTTCCAGGTCTGTTCAGAATTCAATTCTCACCTCCATAACTTCCTTCCTTGTTCTGTTTTCTGTTTGCTTCCAATGAAAGGCATGTAATTTGATAGAAGATCAATGCGCTGATTTTTATTTTTTTTTATTTTGTTATTTTTTGATTTCCATTTTACTTTCATCGAGTATCTTTCTGCTTTATTGTTGCGTCTCTGGATCTAAACCAACTTGTATTTTTAAAGCATTTGAAGATGTAGGAAGCTACTGTTTTGTGCATTGTCCAATGCTAAATTTTCATAGAGTTGTCGACATTTTCATTGAATAGTTCAAGAACGATTTAGAAAAATCATCCCAAGCTCAGTTTCTTGTATGTCAAGCTTTATCTATTGATTTTTGCTGAGCATTTCGTTTTGTTCCTTCCTCCCTTCCATTTGAAGTTGTCTTTTCTTTTAATACACCAGATAAGACAGAAGATCCTTCTGTGATAGTTGAGAAAGAGGTTACAGAATCAGTTTCAGGGTCACCAAAAGATGTGCAAACTAACAAAGTTAGAGAAAATATAGTGAGGGTTGAACCATCTCGACAGATTGATATGGCTGGAGAGATTAGCATGGAGGCCTCCATGTCGGCTGATGATGTTTTACGGGCTGGTGGGTTTGGTGCGAGGGATGATATCGGTTGTTTTCTTCCTGTTGCAAGTGATTCTACTGACTTTGAGGCTACAATTCTCAATGCTCGAGACTACGAAGGACCACAGGGAGAAATTTCTAGACCAGGTCTTGGCTGGAAAGAAGCTACAAAAGCTGAGTAG ATGGATATTTATCCGAGCTCTTCACTTCCACTTCCAGATAAGACAGAAGATCCTTCTGTGATAGTTGAGAAAGAGGTTACAGAATCAGTTTCAGGGTCACCAAAAGATGTGCAAACTAACAAAGTTAGAGAAAATATAGTGAGGGTTGAACCATCTCGACAGATTGATATGGCTGGAGAGATTAGCATGGAGGCCTCCATGTCGGCTGATGATGTTTTACGGGCTGGTGGGTTTGGTGCGAGGGATGATATCGGTTGTTTTCTTCCTGTTGCAAGTGATTCTACTGACTTTGAGGCTACAATTCTCAATGCTCGAGACTACGAAGGACCACAGGGAGAAATTTCTAGACCAGGTCTTGGCTGGAAAGAAGCTACAAAAGCTGAGTAG ATGGATATTTATCCGAGCTCTTCACTTCCACTTCCAGATAAGACAGAAGATCCTTCTGTGATAGTTGAGAAAGAGGTTACAGAATCAGTTTCAGGGTCACCAAAAGATGTGCAAACTAACAAAGTTAGAGAAAATATAGTGAGGGTTGAACCATCTCGACAGATTGATATGGCTGGAGAGATTAGCATGGAGGCCTCCATGTCGGCTGATGATGTTTTACGGGCTGGTGGGTTTGGTGCGAGGGATGATATCGGTTGTTTTCTTCCTGTTGCAAGTGATTCTACTGACTTTGAGGCTACAATTCTCAATGCTCGAGACTACGAAGGACCACAGGGAGAAATTTCTAGACCAGGTCTTGGCTGGAAAGAAGCTACAAAAGCTGAGTAG MDIYPSSSLPLPDKTEDPSVIVEKEVTESVSGSPKDVQTNKVRENIVRVEPSRQIDMAGEISMEASMSADDVLRAGGFGARDDIGCFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKAE Homology
BLAST of Tan0014202 vs. NCBI nr
Match: XP_038905784.1 (uncharacterized protein LOC120091740 [Benincasa hispida] >XP_038905785.1 uncharacterized protein LOC120091740 [Benincasa hispida]) HSP 1 Score: 207.2 bits (526), Expect = 8.3e-50 Identity = 108/128 (84.38%), Postives = 117/128 (91.41%), Query Frame = 0
BLAST of Tan0014202 vs. NCBI nr
Match: XP_008443333.1 (PREDICTED: uncharacterized protein LOC103486945 isoform X1 [Cucumis melo]) HSP 1 Score: 204.5 bits (519), Expect = 5.4e-49 Identity = 103/128 (80.47%), Postives = 118/128 (92.19%), Query Frame = 0
BLAST of Tan0014202 vs. NCBI nr
Match: KAA0053822.1 (uncharacterized protein E6C27_scaffold135G002100 [Cucumis melo var. makuwa] >TYK25579.1 uncharacterized protein E5676_scaffold352G007360 [Cucumis melo var. makuwa]) HSP 1 Score: 198.7 bits (504), Expect = 2.9e-47 Identity = 98/118 (83.05%), Postives = 110/118 (93.22%), Query Frame = 0
BLAST of Tan0014202 vs. NCBI nr
Match: XP_022983884.1 (uncharacterized protein LOC111482364 isoform X2 [Cucurbita maxima]) HSP 1 Score: 197.6 bits (501), Expect = 6.6e-47 Identity = 102/128 (79.69%), Postives = 114/128 (89.06%), Query Frame = 0
BLAST of Tan0014202 vs. NCBI nr
Match: XP_004136669.1 (uncharacterized protein LOC101207074 isoform X1 [Cucumis sativus] >KAE8651196.1 hypothetical protein Csa_002642 [Cucumis sativus]) HSP 1 Score: 195.7 bits (496), Expect = 2.5e-46 Identity = 99/128 (77.34%), Postives = 115/128 (89.84%), Query Frame = 0
BLAST of Tan0014202 vs. ExPASy TrEMBL
Match: A0A1S3B7A8 (uncharacterized protein LOC103486945 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486945 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.6e-49 Identity = 103/128 (80.47%), Postives = 118/128 (92.19%), Query Frame = 0
BLAST of Tan0014202 vs. ExPASy TrEMBL
Match: A0A5A7UDF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007360 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47 Identity = 98/118 (83.05%), Postives = 110/118 (93.22%), Query Frame = 0
BLAST of Tan0014202 vs. ExPASy TrEMBL
Match: A0A6J1J8S5 (uncharacterized protein LOC111482364 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482364 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 3.2e-47 Identity = 102/128 (79.69%), Postives = 114/128 (89.06%), Query Frame = 0
BLAST of Tan0014202 vs. ExPASy TrEMBL
Match: A0A1S4DUS7 (uncharacterized protein LOC103486945 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486945 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46 Identity = 97/116 (83.62%), Postives = 108/116 (93.10%), Query Frame = 0
BLAST of Tan0014202 vs. ExPASy TrEMBL
Match: A0A6J1F7V5 (uncharacterized protein LOC111441654 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441654 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 2.1e-46 Identity = 100/128 (78.12%), Postives = 114/128 (89.06%), Query Frame = 0
BLAST of Tan0014202 vs. TAIR 10
Match: AT5G04000.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 99.0 bits (245), Expect = 3.0e-21 Identity = 46/63 (73.02%), Postives = 56/63 (88.89%), Query Frame = 0
BLAST of Tan0014202 vs. TAIR 10
Match: AT5G04000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, hypocotyl. ) HSP 1 Score: 99.0 bits (245), Expect = 3.0e-21 Identity = 46/63 (73.02%), Postives = 56/63 (88.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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