Tan0014202 (gene) Snake gourd v1

Overview


Name	Tan0014202
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG10: 30057612 .. 30058432 (+)
RNA-Seq Expression	Tan0014202
Synteny	Tan0014202

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATTTATCCGAGCTCTTCACTTCCACTTCCAGGTCTGTTCAGAATTCAATTCTCACCTCCATAACTTCCTTCCTTGTTCTGTTTTCTGTTTGCTTCCAATGAAAGGCATGTAATTTGATAGAAGATCAATGCGCTGATTTTTATTTTTTTTTATTTTGTTATTTTTTGATTTCCATTTTACTTTCATCGAGTATCTTTCTGCTTTATTGTTGCGTCTCTGGATCTAAACCAACTTGTATTTTTAAAGCATTTGAAGATGTAGGAAGCTACTGTTTTGTGCATTGTCCAATGCTAAATTTTCATAGAGTTGTCGACATTTTCATTGAATAGTTCAAGAACGATTTAGAAAAATCATCCCAAGCTCAGTTTCTTGTATGTCAAGCTTTATCTATTGATTTTTGCTGAGCATTTCGTTTTGTTCCTTCCTCCCTTCCATTTGAAGTTGTCTTTTCTTTTAATACACCAGATAAGACAGAAGATCCTTCTGTGATAGTTGAGAAAGAGGTTACAGAATCAGTTTCAGGGTCACCAAAAGATGTGCAAACTAACAAAGTTAGAGAAAATATAGTGAGGGTTGAACCATCTCGACAGATTGATATGGCTGGAGAGATTAGCATGGAGGCCTCCATGTCGGCTGATGATGTTTTACGGGCTGGTGGGTTTGGTGCGAGGGATGATATCGGTTGTTTTCTTCCTGTTGCAAGTGATTCTACTGACTTTGAGGCTACAATTCTCAATGCTCGAGACTACGAAGGACCACAGGGAGAAATTTCTAGACCAGGTCTTGGCTGGAAAGAAGCTACAAAAGCTGAGTAG

mRNA sequence

ATGGATATTTATCCGAGCTCTTCACTTCCACTTCCAGATAAGACAGAAGATCCTTCTGTGATAGTTGAGAAAGAGGTTACAGAATCAGTTTCAGGGTCACCAAAAGATGTGCAAACTAACAAAGTTAGAGAAAATATAGTGAGGGTTGAACCATCTCGACAGATTGATATGGCTGGAGAGATTAGCATGGAGGCCTCCATGTCGGCTGATGATGTTTTACGGGCTGGTGGGTTTGGTGCGAGGGATGATATCGGTTGTTTTCTTCCTGTTGCAAGTGATTCTACTGACTTTGAGGCTACAATTCTCAATGCTCGAGACTACGAAGGACCACAGGGAGAAATTTCTAGACCAGGTCTTGGCTGGAAAGAAGCTACAAAAGCTGAGTAG

Coding sequence (CDS)

ATGGATATTTATCCGAGCTCTTCACTTCCACTTCCAGATAAGACAGAAGATCCTTCTGTGATAGTTGAGAAAGAGGTTACAGAATCAGTTTCAGGGTCACCAAAAGATGTGCAAACTAACAAAGTTAGAGAAAATATAGTGAGGGTTGAACCATCTCGACAGATTGATATGGCTGGAGAGATTAGCATGGAGGCCTCCATGTCGGCTGATGATGTTTTACGGGCTGGTGGGTTTGGTGCGAGGGATGATATCGGTTGTTTTCTTCCTGTTGCAAGTGATTCTACTGACTTTGAGGCTACAATTCTCAATGCTCGAGACTACGAAGGACCACAGGGAGAAATTTCTAGACCAGGTCTTGGCTGGAAAGAAGCTACAAAAGCTGAGTAG

Protein sequence

MDIYPSSSLPLPDKTEDPSVIVEKEVTESVSGSPKDVQTNKVRENIVRVEPSRQIDMAGEISMEASMSADDVLRAGGFGARDDIGCFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKAE

Homology

[Close]

BLAST of Tan0014202 vs. NCBI nr
Match: XP_038905784.1 (uncharacterized protein LOC120091740 [Benincasa hispida] >XP_038905785.1 uncharacterized protein LOC120091740 [Benincasa hispida])

HSP 1 Score: 207.2 bits (526), Expect = 8.3e-50
Identity = 108/128 (84.38%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MDIYPSSSLPLPDKTEDPSVIVEKEVTESVSGSPKDVQTNKVRENIVRVEPSRQIDMAGE 60
           M+++ SSS  LPDK EDPSV VEK+VTESVS SPKDVQTN+ R NI++ EPS+Q+DMAGE
Sbjct: 1   MEVHRSSS--LPDKREDPSVGVEKDVTESVSSSPKDVQTNRGRGNIMKGEPSQQVDMAGE 60

Query: 61  ISMEASMSADDVLRAGGFGARDDIGCFLPVASDSTDFEATILNARDYEGPQGEISRPGLG 120
           ISMEASMSADDVLRAGGFGARDDIG FLPVASDSTDFEATILNARDYEGPQGEISRPGLG
Sbjct: 61  ISMEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLG 120

Query: 121 WKEATKAE 129
           WKEATK E
Sbjct: 121 WKEATKTE 126

[Close]

BLAST of Tan0014202 vs. NCBI nr
Match: XP_008443333.1 (PREDICTED: uncharacterized protein LOC103486945 isoform X1 [Cucumis melo])

HSP 1 Score: 204.5 bits (519), Expect = 5.4e-49
Identity = 103/128 (80.47%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MDIYPSSSLPLPDKTEDPSVIVEKEVTESVSGSPKDVQTNKVRENIVRVEPSRQIDMAGE 60
           M+++P+SS  LPD+ +D SV+VEK+VTESVS  PKD+QTN+ REN+V+ EP+RQIDMAGE
Sbjct: 41  MELHPTSS--LPDERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGE 100

Query: 61  ISMEASMSADDVLRAGGFGARDDIGCFLPVASDSTDFEATILNARDYEGPQGEISRPGLG 120
           I+MEASMSADDVLRAGGFGARD+IG FLPVASDSTDFEATILNARDYEGPQGEISRPGLG
Sbjct: 101 INMEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLG 160

Query: 121 WKEATKAE 129
           WKEATK E
Sbjct: 161 WKEATKTE 166

[Close]

BLAST of Tan0014202 vs. NCBI nr
Match: KAA0053822.1 (uncharacterized protein E6C27_scaffold135G002100 [Cucumis melo var. makuwa] >TYK25579.1 uncharacterized protein E5676_scaffold352G007360 [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 2.9e-47
Identity = 98/118 (83.05%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 11  LPDKTEDPSVIVEKEVTESVSGSPKDVQTNKVRENIVRVEPSRQIDMAGEISMEASMSAD 70
           +PD+ +D SV+VEK+VTESVS  PKD+QTN+ REN+V+ EP+RQIDMAGEI+MEASMSAD
Sbjct: 75  IPDERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGEINMEASMSAD 134

Query: 71  DVLRAGGFGARDDIGCFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKAE 129
           DVLRAGGFGARD+IG FLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATK E
Sbjct: 135 DVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 192

[Close]

BLAST of Tan0014202 vs. NCBI nr
Match: XP_022983884.1 (uncharacterized protein LOC111482364 isoform X2 [Cucurbita maxima])

HSP 1 Score: 197.6 bits (501), Expect = 6.6e-47
Identity = 102/128 (79.69%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 1   MDIYPSSSLPLPDKTEDPSVIVEKEVTESVSGSPKDVQTNKVRENIVRVEPSRQIDMAGE 60
           M+++P+SS  L D+ EDPSVIVEKEVTESVS SP+DVQTN+ REN+++ EPS+QI M GE
Sbjct: 1   MEVHPTSS--LQDEREDPSVIVEKEVTESVSSSPQDVQTNRSRENVMKTEPSQQIGMDGE 60

Query: 61  ISMEASMSADDVLRAGGFGARDDIGCFLPVASDSTDFEATILNARDYEGPQGEISRPGLG 120
            SMEASMSADDVLRAGGFGARDDIG FLPVASDSTDFEATI +AR YEGPQGEISRPGLG
Sbjct: 61  TSMEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATIRSARAYEGPQGEISRPGLG 120

Query: 121 WKEATKAE 129
           WKEATK E
Sbjct: 121 WKEATKTE 126

[Close]

BLAST of Tan0014202 vs. NCBI nr
Match: XP_004136669.1 (uncharacterized protein LOC101207074 isoform X1 [Cucumis sativus] >KAE8651196.1 hypothetical protein Csa_002642 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 2.5e-46
Identity = 99/128 (77.34%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MDIYPSSSLPLPDKTEDPSVIVEKEVTESVSGSPKDVQTNKVRENIVRVEPSRQIDMAGE 60
           M+++ +SS  LPDK +D SV+VEK+V ESVS  PKDVQTN+  EN+V+ EP++++DMAGE
Sbjct: 1   MELHRTSS--LPDKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGE 60

Query: 61  ISMEASMSADDVLRAGGFGARDDIGCFLPVASDSTDFEATILNARDYEGPQGEISRPGLG 120
           I+MEASMSADDVLRAGGFGARD+IG FLPVASDSTDFEATILNARDYEGPQGEISRPGLG
Sbjct: 61  INMEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLG 120

Query: 121 WKEATKAE 129
           WKEATK E
Sbjct: 121 WKEATKTE 126

[Close]

BLAST of Tan0014202 vs. ExPASy TrEMBL
Match: A0A1S3B7A8 (uncharacterized protein LOC103486945 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486945 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.6e-49
Identity = 103/128 (80.47%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 1   MDIYPSSSLPLPDKTEDPSVIVEKEVTESVSGSPKDVQTNKVRENIVRVEPSRQIDMAGE 60
           M+++P+SS  LPD+ +D SV+VEK+VTESVS  PKD+QTN+ REN+V+ EP+RQIDMAGE
Sbjct: 41  MELHPTSS--LPDERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGE 100

Query: 61  ISMEASMSADDVLRAGGFGARDDIGCFLPVASDSTDFEATILNARDYEGPQGEISRPGLG 120
           I+MEASMSADDVLRAGGFGARD+IG FLPVASDSTDFEATILNARDYEGPQGEISRPGLG
Sbjct: 101 INMEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLG 160

Query: 121 WKEATKAE 129
           WKEATK E
Sbjct: 161 WKEATKTE 166

[Close]

BLAST of Tan0014202 vs. ExPASy TrEMBL
Match: A0A5A7UDF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007360 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 98/118 (83.05%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 11  LPDKTEDPSVIVEKEVTESVSGSPKDVQTNKVRENIVRVEPSRQIDMAGEISMEASMSAD 70
           +PD+ +D SV+VEK+VTESVS  PKD+QTN+ REN+V+ EP+RQIDMAGEI+MEASMSAD
Sbjct: 75  IPDERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGEINMEASMSAD 134

Query: 71  DVLRAGGFGARDDIGCFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKAE 129
           DVLRAGGFGARD+IG FLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATK E
Sbjct: 135 DVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 192

[Close]

BLAST of Tan0014202 vs. ExPASy TrEMBL
Match: A0A6J1J8S5 (uncharacterized protein LOC111482364 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482364 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.2e-47
Identity = 102/128 (79.69%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 1   MDIYPSSSLPLPDKTEDPSVIVEKEVTESVSGSPKDVQTNKVRENIVRVEPSRQIDMAGE 60
           M+++P+SS  L D+ EDPSVIVEKEVTESVS SP+DVQTN+ REN+++ EPS+QI M GE
Sbjct: 1   MEVHPTSS--LQDEREDPSVIVEKEVTESVSSSPQDVQTNRSRENVMKTEPSQQIGMDGE 60

Query: 61  ISMEASMSADDVLRAGGFGARDDIGCFLPVASDSTDFEATILNARDYEGPQGEISRPGLG 120
            SMEASMSADDVLRAGGFGARDDIG FLPVASDSTDFEATI +AR YEGPQGEISRPGLG
Sbjct: 61  TSMEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATIRSARAYEGPQGEISRPGLG 120

Query: 121 WKEATKAE 129
           WKEATK E
Sbjct: 121 WKEATKTE 126

[Close]

BLAST of Tan0014202 vs. ExPASy TrEMBL
Match: A0A1S4DUS7 (uncharacterized protein LOC103486945 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486945 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46
Identity = 97/116 (83.62%), Postives = 108/116 (93.10%), Query Frame = 0


Query: 13  DKTEDPSVIVEKEVTESVSGSPKDVQTNKVRENIVRVEPSRQIDMAGEISMEASMSADDV 72
           D+ +D SV+VEK+VTESVS  PKD+QTN+ REN+V+ EP+RQIDMAGEI+MEASMSADDV
Sbjct: 7   DERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGEINMEASMSADDV 66

Query: 73  LRAGGFGARDDIGCFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKAE 129
           LRAGGFGARD+IG FLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATK E
Sbjct: 67  LRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 122

[Close]

BLAST of Tan0014202 vs. ExPASy TrEMBL
Match: A0A6J1F7V5 (uncharacterized protein LOC111441654 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441654 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.1e-46
Identity = 100/128 (78.12%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 1   MDIYPSSSLPLPDKTEDPSVIVEKEVTESVSGSPKDVQTNKVRENIVRVEPSRQIDMAGE 60
           M+++P+SS  L D+ EDPSV+VEKEVTESVS SP+DVQTN+ REN+++ EPS+QI + GE
Sbjct: 1   MEVHPTSS--LQDEREDPSVMVEKEVTESVSSSPQDVQTNRSRENVMKTEPSQQIGIDGE 60

Query: 61  ISMEASMSADDVLRAGGFGARDDIGCFLPVASDSTDFEATILNARDYEGPQGEISRPGLG 120
            SMEASMSADDVLRAGGFGARDDIG FLPVASDSTDFEATI +AR YEGPQGEISRPGLG
Sbjct: 61  ASMEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATIRSARAYEGPQGEISRPGLG 120

Query: 121 WKEATKAE 129
           WKEATK E
Sbjct: 121 WKEATKTE 126

[Close]

BLAST of Tan0014202 vs. TAIR 10
Match: AT5G04000.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 3.0e-21
Identity = 46/63 (73.02%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 59  GEISMEASMSADDVLRAGGFGARDDIGCFLPVASDSTDFEATILNARDYEGPQGEISRPG 118
           GE++MEAS+SA+DV+RAGGFGA+DDIG FLPVASDSTDFE +I +ARDYE  Q E+ RPG
Sbjct: 51  GEVNMEASISAEDVIRAGGFGAKDDIGSFLPVASDSTDFEESIRSARDYEEAQPEVQRPG 110

Query: 119 LGW 122
           LG+
Sbjct: 111 LGY 113

[Close]

BLAST of Tan0014202 vs. TAIR 10
Match: AT5G04000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, hypocotyl. )

HSP 1 Score: 99.0 bits (245), Expect = 3.0e-21
Identity = 46/63 (73.02%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 59  GEISMEASMSADDVLRAGGFGARDDIGCFLPVASDSTDFEATILNARDYEGPQGEISRPG 118
           GE++MEAS+SA+DV+RAGGFGA+DDIG FLPVASDSTDFE +I +ARDYE  Q E+ RPG
Sbjct: 53  GEVNMEASISAEDVIRAGGFGAKDDIGSFLPVASDSTDFEESIRSARDYEEAQPEVQRPG 112

Query: 119 LGW 122
           LG+
Sbjct: 113 LGY 115

The following BLAST results are available for this feature:

BLAST of Tan0014202 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0014202 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905784.1	8.3e-50	84.38	uncharacterized protein LOC120091740 [Benincasa hispida] >XP_038905785.1 unchara...	[more]
XP_008443333.1	5.4e-49	80.47	PREDICTED: uncharacterized protein LOC103486945 isoform X1 [Cucumis melo]	[more]
KAA0053822.1	2.9e-47	83.05	uncharacterized protein E6C27_scaffold135G002100 [Cucumis melo var. makuwa] >TYK...	[more]
XP_022983884.1	6.6e-47	79.69	uncharacterized protein LOC111482364 isoform X2 [Cucurbita maxima]	[more]
XP_004136669.1	2.5e-46	77.34	uncharacterized protein LOC101207074 isoform X1 [Cucumis sativus] >KAE8651196.1 ...	[more]

BLAST of Tan0014202 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B7A8	2.6e-49	80.47	uncharacterized protein LOC103486945 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UDF7	1.4e-47	83.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1J8S5	3.2e-47	79.69	uncharacterized protein LOC111482364 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S4DUS7	1.6e-46	83.62	uncharacterized protein LOC103486945 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1F7V5	2.1e-46	78.13	uncharacterized protein LOC111441654 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Tan0014202 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04000.1	3.0e-21	73.02	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]
AT5G04000.2	3.0e-21	73.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..128
None	No IPR available	PANTHER	PTHR37250	OS05G0496000 PROTEIN	coord: 23..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0014202.1	Tan0014202.1	mRNA