Tan0013829 (gene) Snake gourd v1

Overview
NameTan0013829
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase domain-containing protein
LocationLG01: 18597328 .. 18601726 (+)
RNA-Seq ExpressionTan0013829
SyntenyTan0013829
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCTAGATTTCAACATGGGTTGTGAAACAAATGAGAAGCAGCAAGCTCCTAGCTCCGGATCCAAAACTAAATTAAGCCTCCAAAAGAAGAATAAACCAATTGACGGAGAGATGGGCCACAAAAATCACAAAAAGATTTCAGGAAAGAAGCACTTGCTGGAAACCAACACTGAAGCCCAATCAAATAAAAAAGCACGAGCTTCTGAAGGCTCGCTCGAAAACAGGGAAGTTATTAATTCGATGGAAAATGTTCCTATTGTATTGGCGGAGGCTGCAGTGCAGCCCCGTCATCATCCATGAGTTTTTTATGTTGGAATGTTCGAGGATTGGGGCACCCTCGCACATTCCGCGCCTTATGCCATATAGTGCAAAGGCTAAAGCCTCATATTGTGTTTCTTTCTGAGTCTAAATCATGCTCTAGTAAGAATGATCAAATAAAAATGAAGTTACATTTTGACTATTGCTTCTCGGTTCCTAGTATTGACAAAAGTGGTGGACTATTACTTTTATGGAATAAAGAAACTGATCTCAAAATAACTTCCTTTTCTGCAGGACACATCGATTCAATTATCTTAGATAAAAGTGGCAATAGCATGGCGGTTCATGAGTTTCTACATGGAAATCCACGGAAAGAGCAACGCAAACACTCCTGGGAATTATTAAAACGTTTACATAGACAATTTGATTTACCGTGGGTTATTGGCGGGGATTTTAATGAGATTCTTGCTGACAATGAAAAACAAGGAGGAGCTTTAAGGAGAGAGGCTCAGATGGATGATTTTAGAGAGGTGTTGGATGAATGCAACTTGATGGACCCGGGGTATCAAGGTCATGATTTCACTTGGATCAGAAAGGTAAACAATGGTCCAACAACGTGGGAACGTTTGGATTGTTTCCTTCTGAACATAGGTTATTTTACTAAATGGAGCCAGTTTCAGGTTATTCACTTAGGTTTTTATTCATCAGACCATAGACCAATTTTTGGATATCATACAGGGGAACCTAAGTCTAACACCAAATATGAAAAAGGCCTCATAAGATTCGAACCTGGTTGGATAAAAAACTCAGAAGCCAAAGAAATTGTGGCTAGGATGTGGCAAAATAATAGACCACCAACATCGAATAATCTCCAGGACCACCTGATTCAGTGCTTAACAGAATTAAAACGATGGAATCAGCGTCGTATAGGTGGATCAATCCGAGGGGCCATCCAAAAGAAGGAGGCAGAAATAAAAATTTTAGAAAGTGATTTAACACAGGAGAAAGAAGAGATCTGGAAACGTAAAATGACAGAATTGGAGGACTTACTTGAAGAAGATAATACTTATTGGCGTCAAAGATCAAGGGAAGAATGGTTACAATGGGGAGATCGCAACACAAAATGGTTTCACATTAGAGCGACGACCCGACGGAAGAAAAATCTCATCAAAGGTATTTTCAATAGTTCTGGTGACTGGATCACAAATGAAGAGGAACTGGGTAGGTTGGCAACCTCACATTTTGCCAAACTGTTCAGGTCAAACTCGCCCGATTCCACGGCAATTGAAGAGGTTATCGAGAGTATTCCCCAAAGGATCTCAGAAGAAACTAACAATGGACTCTTAAGAGACTTCACAAGGGAGGAAATTGAAAATGTTATAAAAAACATAAGTCCATTTAAGGCCCCTGGGCCAGATGGAATTCATGCTGGTTTTTACCAAGAATATTGGGATATAGTTGGAGAGGACATCACAAATATATGCTTAAATTCGCTAAACAGATTAGGTGACCTGAGGAGACTGAACCAAACATTGCTAGCTCTAATCCCCAAGAAAGCTAATCCAGACAAACTAGAGGATTTCCGTCCAATCAGTCTTTGTAATGTGGTCTACAAGATTATAGCTAAGTGCTTAACAAATAGACTGAAAAAAGTTTTAGATCAGGTGATCTCTCCAGAACAATCAGCTTTCATCCCAAACAGAACGATCACGGACAACGCCCTTATTGGTTTTGAATGTCTTCATGCAATAAATAATAAACGCAATGGAAAAATGGGCTCAGTAGCAATGAAACTTGACATGAGTAAAGCTTATGACAGAGTAGAGTGGAGTTACCTCCGACGAGTTATGCTAAAAATGGGTTTCCACTCTCTTTGGGTGAAAAAGATTATGAATTGCGTTGAATCACATCGGTTTCTCGATCCTTTTAATGGCAAGCCCAGGACATTTTCCTCCCCAAGCGGGGTTTGAGACAGGGAGACCCTCTATCCCCTTACTTATTCATTATTTGTGCTGAAGGCTTTTCTGCGTTGCTTCATAAAGAACAAAATTTAAATAATTTCTCTGGCTTGAAAATTAATCGTTTCTGCCCTATAATATCTCATCTTTTCTATGCAGATGACAGCATAATCTTCTTCAGGGCCAAACTTCAAGACATTCGAACAATCAAAGAGATTTTGAACATATACGAACGAGCATCTGGACAGATAATAAATTATGACAAATCAGCTTTTATGGTCAGCAAGAACACAAATATGAACATAATAGAGTTGATTAAACAACTCCTTAATGTTCGGCAGACAGAGTCGTTGGGATGTTACTTAGGCCTACCTTCCCAGAACTCTAAAAACAAAACCCAAGTCTTCAGGTCAATTAAAGACCGGATGTGGAAGGTTTTGCGGGGTTGGCAAGGCAAACTATTTTCAAGTGGCGGAAAGGAAGTGCTTATAAAGACGGTGGCCCAGGCCATTCCGGTCTATACAATGAGCTGTTTTCGGTTGCCAAAAAGTCTTTGCACAAAATTGAATGCAATGTGCGCCAATTTTTGGTGGGGCTCAAATGAGAAAGGCCGGAAAATTCACTGGCAACGCTGGGATCGACTTTGCCTCCCAAGAGATGAAGGAGGTATGGGCTTCAGAGATATCTCCTTATTTAACCAGGCTATGTTAGCCAAACAAAGTTGGCGACTGCTACGACAACCAGATAGCTTACTTTATCGAATTCTCCGTGGCCGTTATTTTCAGACAGGGAATTTTCTAAAAGCAACACTCGGATCTAATCCATCCTACACTTGGCGAAGCATATTGTGGGGACGAGAGCTTTTTAAGAAAGGATACAGATGGAAAATCGGAAACGGCTGTCAAGTAAGTATAATGAATGACCCCTGGTTCACAACTGAAGGTCAGGAGCATCCCTTGGAAGTTAACCCTGATCTAGCCCAAAACTCAGTCCATTCTATTTTGAAGGAGGATGGGACATGGGATATGGAAAGGATTCAAAGAAATTTTTCTAGGGACGACGCCCTCCACATACTTCAGATTCCTCGAACTGGATCTCGTATGAATGATGAAATAGTATGGAAACATAACAATCGGGAATCTTTATGATCAAAAGTGCGATCGACTAGGCATTAAGTACCGATGTCATCTAGATGCCTCAAGCTCTGATAATGAGAAAGTCAGGGGGTTCTGGAAAAAGATATGGGAGACAACGATTCCAAGAAAAATTAAGATTTGTGCCTGGAAAATTATCCAGAACGCTCTCCCAACAAAGGACACCCATCGCGGAGGGAATGAAATGTCACCCGGTGTCCGATGTGCAAATCACACCCCGAATCTATTCGCCATGTGTTCTGGGGCTGTAAGGTAACTCGAAAATTTTGGCGTTTTTTCTTACCCTCTCACGGAGATACTTTTTATGATTTCAGGAAATCCTGGGGCGCGTACGACTATTTTTGGTGGATAATGGACCGTGGCAATAAGGAGGAACTCCATGTTTTCATAATAATTTTGTGGAAAATTTGGAATAACAGAAATGACACTGTATCTGATGTGAATACCGATACTGATTGGGATAGATGGAGAAGAACCACACAAATGACCATTAATGAGTTAACTCAGAACCCCATCAGTCGAGCCCGTGTTCGACTAGGAAGTCAAAATATCCCTCAACAATGGAGCCCTCCCACTCAGGGTTGGTGGAGCCTTTGTACGGATGCGTCCTGGAGTGACGAATTGAATAGTGGAGGTATTGGTTGGATGGTACGAAACTGGGAAGGTCATGTGATCTGTGCAGGACATTCTTGCATTAACACTTACTGGCCTATTTTGGTTATGGAATTATTTGGGATAATTAAAGGAATGAGATCGATTACGGATAAAGGTATTCCCTTGATGGTGGAATCGGATTCGCTCGAAGCCATACTTTTGATAGAAGGAAAAATTGAAGATTGCACAGAAGCACGAGATTTCACAGATATAATTCACAACATGCGAGAGGACTGGAATGACATCATGTTCCGGCACATCCCTCGATCATCGAACCAAGAAGCTCACAAGCTCGCACAGAGAGCATCTCATCTTCAACAAGACGAAATTTGGTCGGGGGAGTCTTTTGGACTCCATTACTTTATTAGTTAA

mRNA sequence

ATGGGCCTAGATTTCAACATGGGTTGTGAAACAAATGAGAAGCAGCAAGCTCCTAGCTCCGGATCCAAAACTAAATTAAGCCTCCAAAAGAAGAATAAACCAATTGACGGAGAGATGGGCCACAAAAATCACAAAAAGATTTCAGGAAAGAAGCACTTGCTGGAAACCAACACTGAAGCCCAATCAAATAAAAAAGCACGAGCTTCTGAAGGCTCGCTCGAAAACAGGGAAGTTATTAATTCGATGGAAAATATGGATGATTTTAGAGAGGTGTTGGATGAATGCAACTTGATGGACCCGGGGTATCAAGGTCATGATTTCACTTGGATCAGAAAGGTAAACAATGGTCCAACAACGTGGGAACGTTTGGATTGTTTCCTTCTGAACATAGGTTATTTTACTAAATGGAGCCAGTTTCAGGTTATTCACTTAGGTTTTTATTCATCAGACCATAGACCAATTTTTGGATATCATACAGGGGAACCTAAGTCTAACACCAAATATGAAAAAGGCCTCATAAGATTCGAACCTGGTTGGATAAAAAACTCAGAAGCCAAAGAAATTGTGTGCTTAACAGAATTAAAACGATGGAATCAGCGTCGTATAGGTGGATCAATCCGAGGGGCCATCCAAAAGAAGGAGGCAGAAATAAAAATTTTAGAAAGTGATTTAACACAGGAGAAAGAAGAGATCTGGAAACGTAAAATGACAGAATTGGAGGACTTACTTGAAGAAGATAATACTTATTGGCGTCAAAGATCAAGGGAAGAATGGTTACAATGGGGAGATCGCAACACAAAATGGTTTCACATTAGAGCGACGACCCGACGGAAGAAAAATCTCATCAAAGGTATTTTCAATAGTTCTGGTGACTGGATCACAAATGAAGAGGAACTGGGTAGGTTGGCAACCTCACATTTTGCCAAACTGTTCAGGTCAAACTCGCCCGATTCCACGGCAATTGAAGAGGTTATCGAGAATACTTTTTATGATTTCAGGAAATCCTGGGGCGCGTACGACTATTTTTGGTGGATAATGGACCGTGGCAATAAGGAGGAACTCCATGTTTTCATAATAATTTTGTGGAAAATTTGGAATAACAGAAATGACACTGTATCTGATGTGAATACCGATACTGATTGGGATAGATGGAGAAGAACCACACAAATGACCATTAATGAGTTAACTCAGAACCCCATCAGTCGAGCCCGTGTTCGACTAGGAAGTCAAAATATCCCTCAACAATGGAGCCCTCCCACTCAGGGTTGGTGGAGCCTTTGTACGGATGCGTCCTGGAGTGACGAATTGAATAGTGGAGGTATTGGTTGGATGGTACGAAACTGGGAAGGTCATGTGATCTGTGCAGGACATTCTTGCATTAACACTTACTGGCCTATTTTGGTTATGGAATTATTTGGGATAATTAAAGGAATGAGATCGATTACGGATAAAGGTATTCCCTTGATGGTGGAATCGGATTCGCTCGAAGCCATACTTTTGATAGAAGGAAAAATTGAAGATTGCACAGAAGCACGAGATTTCACAGATATAATTCACAACATGCGAGAGGACTGGAATGACATCATGTTCCGGCACATCCCTCGATCATCGAACCAAGAAGCTCACAAGCTCGCACAGAGAGCATCTCATCTTCAACAAGACGAAATTTGGTCGGGGGAGTCTTTTGGACTCCATTACTTTATTAGTTAA

Coding sequence (CDS)

ATGGGCCTAGATTTCAACATGGGTTGTGAAACAAATGAGAAGCAGCAAGCTCCTAGCTCCGGATCCAAAACTAAATTAAGCCTCCAAAAGAAGAATAAACCAATTGACGGAGAGATGGGCCACAAAAATCACAAAAAGATTTCAGGAAAGAAGCACTTGCTGGAAACCAACACTGAAGCCCAATCAAATAAAAAAGCACGAGCTTCTGAAGGCTCGCTCGAAAACAGGGAAGTTATTAATTCGATGGAAAATATGGATGATTTTAGAGAGGTGTTGGATGAATGCAACTTGATGGACCCGGGGTATCAAGGTCATGATTTCACTTGGATCAGAAAGGTAAACAATGGTCCAACAACGTGGGAACGTTTGGATTGTTTCCTTCTGAACATAGGTTATTTTACTAAATGGAGCCAGTTTCAGGTTATTCACTTAGGTTTTTATTCATCAGACCATAGACCAATTTTTGGATATCATACAGGGGAACCTAAGTCTAACACCAAATATGAAAAAGGCCTCATAAGATTCGAACCTGGTTGGATAAAAAACTCAGAAGCCAAAGAAATTGTGTGCTTAACAGAATTAAAACGATGGAATCAGCGTCGTATAGGTGGATCAATCCGAGGGGCCATCCAAAAGAAGGAGGCAGAAATAAAAATTTTAGAAAGTGATTTAACACAGGAGAAAGAAGAGATCTGGAAACGTAAAATGACAGAATTGGAGGACTTACTTGAAGAAGATAATACTTATTGGCGTCAAAGATCAAGGGAAGAATGGTTACAATGGGGAGATCGCAACACAAAATGGTTTCACATTAGAGCGACGACCCGACGGAAGAAAAATCTCATCAAAGGTATTTTCAATAGTTCTGGTGACTGGATCACAAATGAAGAGGAACTGGGTAGGTTGGCAACCTCACATTTTGCCAAACTGTTCAGGTCAAACTCGCCCGATTCCACGGCAATTGAAGAGGTTATCGAGAATACTTTTTATGATTTCAGGAAATCCTGGGGCGCGTACGACTATTTTTGGTGGATAATGGACCGTGGCAATAAGGAGGAACTCCATGTTTTCATAATAATTTTGTGGAAAATTTGGAATAACAGAAATGACACTGTATCTGATGTGAATACCGATACTGATTGGGATAGATGGAGAAGAACCACACAAATGACCATTAATGAGTTAACTCAGAACCCCATCAGTCGAGCCCGTGTTCGACTAGGAAGTCAAAATATCCCTCAACAATGGAGCCCTCCCACTCAGGGTTGGTGGAGCCTTTGTACGGATGCGTCCTGGAGTGACGAATTGAATAGTGGAGGTATTGGTTGGATGGTACGAAACTGGGAAGGTCATGTGATCTGTGCAGGACATTCTTGCATTAACACTTACTGGCCTATTTTGGTTATGGAATTATTTGGGATAATTAAAGGAATGAGATCGATTACGGATAAAGGTATTCCCTTGATGGTGGAATCGGATTCGCTCGAAGCCATACTTTTGATAGAAGGAAAAATTGAAGATTGCACAGAAGCACGAGATTTCACAGATATAATTCACAACATGCGAGAGGACTGGAATGACATCATGTTCCGGCACATCCCTCGATCATCGAACCAAGAAGCTCACAAGCTCGCACAGAGAGCATCTCATCTTCAACAAGACGAAATTTGGTCGGGGGAGTCTTTTGGACTCCATTACTTTATTAGTTAA

Protein sequence

MGLDFNMGCETNEKQQAPSSGSKTKLSLQKKNKPIDGEMGHKNHKKISGKKHLLETNTEAQSNKKARASEGSLENREVINSMENMDDFREVLDECNLMDPGYQGHDFTWIRKVNNGPTTWERLDCFLLNIGYFTKWSQFQVIHLGFYSSDHRPIFGYHTGEPKSNTKYEKGLIRFEPGWIKNSEAKEIVCLTELKRWNQRRIGGSIRGAIQKKEAEIKILESDLTQEKEEIWKRKMTELEDLLEEDNTYWRQRSREEWLQWGDRNTKWFHIRATTRRKKNLIKGIFNSSGDWITNEEELGRLATSHFAKLFRSNSPDSTAIEEVIENTFYDFRKSWGAYDYFWWIMDRGNKEELHVFIIILWKIWNNRNDTVSDVNTDTDWDRWRRTTQMTINELTQNPISRARVRLGSQNIPQQWSPPTQGWWSLCTDASWSDELNSGGIGWMVRNWEGHVICAGHSCINTYWPILVMELFGIIKGMRSITDKGIPLMVESDSLEAILLIEGKIEDCTEARDFTDIIHNMREDWNDIMFRHIPRSSNQEAHKLAQRASHLQQDEIWSGESFGLHYFIS
Homology
BLAST of Tan0013829 vs. NCBI nr
Match: XP_030924745.1 (uncharacterized protein LOC115951731 [Quercus lobata])

HSP 1 Score: 146.0 bits (367), Expect = 1.0e-30
Identity = 82/265 (30.94%), Postives = 137/265 (51.70%), Query Frame = 0

Query: 85  MDDFREVLDECNLMDPGYQGHDFTWIRKVNNGPTTWERLDCFLLNIGYFTKWSQFQVIHL 144
           M  FR+ LD+C L D G+ G+ FTW  +       W RLD  +  + +  ++   ++ HL
Sbjct: 128 MQLFRDALDDCRLKDLGFNGYPFTWCNRRTGAHNVWIRLDRGVATVEWMLRFPTSRIHHL 187

Query: 145 GFYSSDHRPIFGYHTGEPKSNTKYEKGLIRFEPGWIKNSEAKEIV--------------- 204
             + SDH+PI      E K   ++ +   RFE  W+K+   ++++               
Sbjct: 188 DAFHSDHKPILLCTDSELKRFYRWGRP-FRFEAMWVKDDSCEQVIQDSWGTARLATSIWG 247

Query: 205 -------CLTELKRWNQRRIGGSIRGAIQKKEAEIKILESD--LTQEKEEIWKRKMTELE 264
                      L+ WN R+  G +R ++ KK  E+K++E       +   ++  + TE+E
Sbjct: 248 FNNKLEPIQGSLQTWN-RQSFGHVRNSLAKKLKELKVVEESGGYVSDPTRVYLLR-TEIE 307

Query: 265 DLLEEDNTYWRQRSREEWLQWGDRNTKWFHIRATTRRKKNLIKGIFNSSGDWITNEEELG 324
            L  ++   W+QRSR  WL+ GDRNT +FH RAT R K+NLI G+ + +G W+  EE+LG
Sbjct: 308 QLKSKEECMWKQRSRTAWLKEGDRNTSYFHCRATQRNKRNLILGLEDEAGQWVDKEEDLG 367

Query: 325 RLATSHFAKLFRSNSPDSTAIEEVI 326
           R+   +F  +F S++P  +  EE++
Sbjct: 368 RVVEDYFQNMFTSSNP--SQFEEIL 387

BLAST of Tan0013829 vs. NCBI nr
Match: XP_030923017.1 (uncharacterized protein LOC115949892 [Quercus lobata])

HSP 1 Score: 146.0 bits (367), Expect = 1.0e-30
Identity = 86/270 (31.85%), Postives = 139/270 (51.48%), Query Frame = 0

Query: 79  INSMENMDDFREVLDECNLMDPGYQGHDFTWIRKVNNGPTTWERLDCFLLNIGYFTKWSQ 138
           I   + M DFR+ LD C L D G+ G  FTW  +  N    W RLD  +    +  K+  
Sbjct: 152 IRPEKQMQDFRDCLDVCGLKDLGFSGLPFTWCNRRYNEALVWVRLDRAVATADWILKFPT 211

Query: 139 FQVIHLGFYSSDHRPIFGYHTGEPKSNTKYEKGLIRFEPGWIKNSEAKEIV--------- 198
            ++ HL   SSDH+P++   + + ++     K   RFE  W+ +   + +V         
Sbjct: 212 ARLHHLPGSSSDHKPLW-LVSDDLQTRFARAKKPFRFEAMWLNDERCEGVVHSVWDRNIG 271

Query: 199 -------------CLTELKRWNQRRIGGSIRGAIQKKEAEIKILESDLTQEKEEIWKRKM 258
                        C T+LK W+ + + G++R A+ +    + I E D    K     + +
Sbjct: 272 GDPVSKIMSKVEECQTQLKLWD-KNVFGNVRKALARNRKLLVIAEGDSMAGKNHARVKLL 331

Query: 259 T-ELEDLLEEDNTYWRQRSREEWLQWGDRNTKWFHIRATTRRKKNLIKGIFNSSGDWITN 318
           + E+  L++ +   W QRS+ EWL++GD+NTK+FH RAT R KKN I G+ N+ G+WI  
Sbjct: 332 SEEISRLMDCEERMWSQRSKTEWLRYGDQNTKYFHCRATERNKKNFISGLENAHGEWIEG 391

Query: 319 EEELGRLATSHFAKLFRSNSPDSTAIEEVI 326
           EE++G L T +++ LF + +P  T +E V+
Sbjct: 392 EEQIGELLTCYYSNLFSTVNP--TELESVL 417

BLAST of Tan0013829 vs. NCBI nr
Match: XP_023896927.1 (uncharacterized protein LOC112008817 [Quercus suber])

HSP 1 Score: 141.4 bits (355), Expect = 2.5e-29
Identity = 79/257 (30.74%), Postives = 135/257 (52.53%), Query Frame = 0

Query: 83  ENMDDFREVLDECNLMDPGYQGHDFTWIRKVNNGPTTWERLDCFLLNIGYFTKWSQFQVI 142
           + M DFR+ LD C L D GY G  FTW  +  N    W RLD  +  + +  K+   ++ 
Sbjct: 122 KQMQDFRDCLDVCGLKDLGYSGLPFTWCNRRYNEALVWVRLDRVVATVDWILKFPTARLH 181

Query: 143 HLGFYSSDHRPIFGYHTGEPKSNTKYEKGLIRFEPGWIKNSEAKEIV------------- 202
           HL   SSDH+P++   + + ++     +   RFE  W+K+   + +V             
Sbjct: 182 HLPGSSSDHKPLW-LVSDDLQTRFNRAQKPFRFEAMWLKDERCEGVVHSVWDKSSSGDPV 241

Query: 203 ---------CLTELKRWNQRRIGGSIRGAIQKKEAEIKILESDLTQEKEEIWKRKMT-EL 262
                    C T+LK W+ + + G++R A+ +    +   E D    +     + ++ E+
Sbjct: 242 SKVLRKVEECQTQLKLWD-KNVFGNVRRALTRNRKLLITAEGDSMAGRNHARVKFLSEEI 301

Query: 263 EDLLEEDNTYWRQRSREEWLQWGDRNTKWFHIRATTRRKKNLIKGIFNSSGDWITNEEEL 317
             L++ +   W QRS+ EWL++GD+NTK+FH RAT R KKN I G+ ++ G+W+  EE++
Sbjct: 302 SRLMDCEERLWSQRSKTEWLRYGDQNTKYFHCRATERNKKNFIPGLEDAQGEWMEGEEKI 361

BLAST of Tan0013829 vs. NCBI nr
Match: XP_030969743.1 (uncharacterized protein LOC115990020 [Quercus lobata])

HSP 1 Score: 139.8 bits (351), Expect = 7.2e-29
Identity = 91/298 (30.54%), Postives = 146/298 (48.99%), Query Frame = 0

Query: 70  EGSLENREVINSMENMDDFREVLDECNLMDPGYQGHDFTWIRKVNNGPTTWERLDCFLLN 129
           E S +N  V  S   M  FR+ LD C  +D G+ G +FTW  +   G   WERLD  + N
Sbjct: 316 EVSDKNGGVPRSHTQMQSFRDALDSCGFVDLGFSGPEFTWHGR-RRGERIWERLDRGVAN 375

Query: 130 IGYFTKWSQFQVIHLGFYSSDHRPIFGYHTGEPKSNTKYEKGLIRFEPGWIKNSEAKEIV 189
             +  ++   +V HL  Y+SDHRP+        K   ++ +   RFE  W+ N   K  V
Sbjct: 376 YEWMARFPTGRVQHLNCYTSDHRPLLLSLDSNGK-RQRWRRKPFRFESMWVSNPGCKVTV 435

Query: 190 ----------------------CLTELKRWNQRRIGGSIRGAIQKKEAEIKILESDLTQE 249
                                 C   LKRW++    G+++  I+  + ++ + E +  Q 
Sbjct: 436 AEAWAGPRRGTPMLNATTKIKECKKRLKRWSKETF-GNVKEQIKVVKEKLWVAEIESVQR 495

Query: 250 KEE-IWKRKMTELEDLLEEDNTYWRQRSREEWLQWGDRNTKWFHIRATTRRKKNLIKGIF 309
            ++        EL  LLE++   W QRSR +WLQ GD+NT++FH  AT R+++N IKG+ 
Sbjct: 496 GDQGTVDNLKAELHGLLEKEEKMWHQRSRVQWLQCGDQNTRFFHGAATCRKRQNFIKGLR 555

Query: 310 NSSGDWITNEEELGRLATSHFAKLFRSNSPDS-----TAIEEVIENTF-YDFRKSWGA 339
           + +G W + E+    L T  + KLF+S++P +       +++V+ N+   D  K + A
Sbjct: 556 DENGVWQSEEQSFSGLLTDFYEKLFKSSNPQNIDRVVDGVQKVVTNSMNADLAKPYSA 610

BLAST of Tan0013829 vs. NCBI nr
Match: XP_023911628.1 (uncharacterized protein LOC112023240 [Quercus suber])

HSP 1 Score: 139.4 bits (350), Expect = 9.4e-29
Identity = 85/262 (32.44%), Postives = 140/262 (53.44%), Query Frame = 0

Query: 85  MDDFREVLDECNLMDPGYQGHDFTWIRKVNNGPTTWERLDCFLLNIGYFTKWSQFQVIHL 144
           ++ FRE L  C L D GY+G+ +TW  K      T  RLD  + N  +  ++   +V+HL
Sbjct: 592 IEAFREALSHCQLHDLGYKGYPYTWSNKRPGEANTKIRLDRGVANKEWTDRFQLSRVVHL 651

Query: 145 GFYSSDHRPIFGYHTGEPKSNTKYEKG-LIRFEPGWIKNSEAKEIV-------------- 204
             ++SDH P+   H  +  S TK   G   +FE  W+  +E  +++              
Sbjct: 652 SSHASDHLPLL-LHI-QSFSQTKQRSGRSFKFEESWLLRAECADVIQEAWGNAGTDRGGL 711

Query: 205 ---------CLTELKRWNQRRIGGSIRG----AIQKKEAEI-KILESDLTQEKEEIWKRK 264
                    C  +L  W     G SI      AI++ + ++ ++ E++LT++ +  +   
Sbjct: 712 AAVQEKIKACGADLMAW-----GSSITDPDTVAIKETQKQLDRLNEAELTEDSKADFLSL 771

Query: 265 MTELEDLLEEDNTYWRQRSREEWLQWGDRNTKWFHIRATTRRKKNLIKGIFNSSGDWITN 318
             ++++LL++   YW QRSR  WLQ GDRNTK+FH +A+ RR+KN I GI NS G W+ N
Sbjct: 772 SKKMDELLQKQEIYWAQRSRINWLQHGDRNTKFFHAKASQRRRKNYISGIRNSQGQWVEN 831

BLAST of Tan0013829 vs. ExPASy TrEMBL
Match: A0A2N9I921 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48455 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.8e-32
Identity = 83/257 (32.30%), Postives = 134/257 (52.14%), Query Frame = 0

Query: 85  MDDFREVLDECNLMDPGYQGHDFTWIRKVNNGPTTWERLDCFLLNIGYFTKWSQFQVIHL 144
           M  FRE LD+C  +D GY G  FTW     +G T WERLD  + +  + +++ Q +V HL
Sbjct: 652 MLSFREALDDCGFVDLGYIGAPFTWCNNRFSGATVWERLDRVVASTAWLSRFPQARVYHL 711

Query: 145 GFYSSDHRPIFGYHTGEPKSNTKYEKGLIRFEPGWIKNSEAKEIV--------------- 204
            +  SDH+P++        +  +      RFE  W+ +S   E +               
Sbjct: 712 DYTGSDHKPLW---LSPTHARNRPVAKPFRFEEMWMTDSGCAETISTAWQSPSNGNSMYQ 771

Query: 205 -------CLTELKRWNQRRIGGSIRGAIQKKEAEIKILESDLTQ-EKEEIWKRKMTELED 264
                  C  +LK W++    GS+R  +Q+K  E+K+ E    Q +  ++      E+  
Sbjct: 772 VITKLNHCRNQLKNWSKSHF-GSVRKQLQEKREELKVAEEKSMQGQSPDLIPSLRAEVSI 831

Query: 265 LLEEDNTYWRQRSREEWLQWGDRNTKWFHIRATTRRKKNLIKGIFNSSGDWITNEEELGR 319
           LL ++   WRQRSR +WL+ GDRNT +FH RAT R+++N I G+ +S G+W T+ +++  
Sbjct: 832 LLSKEERMWRQRSRTQWLKQGDRNTNFFHTRATHRQRRNSIVGLRDSDGEWQTDPDQVQS 891

BLAST of Tan0013829 vs. ExPASy TrEMBL
Match: A0A2N9J109 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58001 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.4e-31
Identity = 86/258 (33.33%), Postives = 131/258 (50.78%), Query Frame = 0

Query: 85  MDDFREVLDECNLMDPGYQGHDFTWIRKVNNGPTTWERLDCFLLNIGYFTKWSQFQVIHL 144
           M  FR+ LD C  +D GY G  FTW     +G T WERLD  +    +   + Q +V HL
Sbjct: 486 MQPFRDALDTCGFIDLGYIGAPFTWCNNRFSGATVWERLDQLVATSEWLAIFPQARVFHL 545

Query: 145 GFYSSDHRPIFGYHTGEPKSNTKYEKGL-IRFEPGWIKNSEAKEIV-------------- 204
            +  SDH+P++      PKSN          FE  W+ +    E +              
Sbjct: 546 DYTGSDHKPLW----LSPKSNHNLRAAKPFWFEEMWMSDLGCAETIANSWKASSSGNHMF 605

Query: 205 --------CLTELKRWNQRRIGGSIRGAIQKKEAEIKILESDLTQEKEEIWKRKM-TELE 264
                   C   LK W++    GSIR  +Q K  E+K+ E +  Q +  +    +  E+ 
Sbjct: 606 WVISKLNHCRKNLKTWSKSNF-GSIRKQLQDKRRELKLAEENAMQGESSVPIHSLRQEVG 665

Query: 265 DLLEEDNTYWRQRSREEWLQWGDRNTKWFHIRATTRRKKNLIKGIFNSSGDWITNEEELG 319
            LL ++   WRQRSR +WL++GDRNT +FH RAT R+++NLI G+ ++ G W T ++++ 
Sbjct: 666 RLLAKEERMWRQRSRSQWLKYGDRNTSFFHSRATHRQRRNLIVGLRDTDGVWRTEQDQIQ 725

BLAST of Tan0013829 vs. ExPASy TrEMBL
Match: A0A2N9IXK4 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57484 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-30
Identity = 85/261 (32.57%), Postives = 126/261 (48.28%), Query Frame = 0

Query: 79  INSMENMDDFREVLDECNLMDPGYQGHDFTWIRKVNNGPTTWERLDCFLLNIGYFTKWSQ 138
           I S   M DFR+ +D C   D G+ G  FTW        T WERLD  L    + + +  
Sbjct: 469 IRSHRQMQDFRDAIDHCGFEDLGFNGPPFTWCNNRLGSHTVWERLDRVLATTSWISLFPL 528

Query: 139 FQVIHLGFYSSDHRPIFGYHTGEPKSNTKYEKGLIRFEPGWIKNSEAKEIV--------- 198
            QV HL   SSDH PI    +  P S  +  + + RFE  W+ +   KE +         
Sbjct: 529 AQVQHLHAVSSDHNPISNQFSPSPSSRPRSNR-IFRFEEMWLSHPGCKETITSAWQTQKH 588

Query: 199 -------------CLTELKRWNQRRIGGSIRGAIQKKEAEIKILESDLTQEKEEIWKRKM 258
                        C   L++W+ R   G++   ++KK   ++  ES+  + K       +
Sbjct: 589 GTAMFQVHDKLRTCRNSLRQWS-RDSFGNVTSELKKKTQMLREAESESMKGKGHAKAHAL 648

Query: 259 -TELEDLLEEDNTYWRQRSREEWLQWGDRNTKWFHIRATTRRKKNLIKGIFNSSGDWITN 317
             E+  LL  +   WRQRSR++WL+WGD+NT +FH  AT RR++NLI  I ++ G+   +
Sbjct: 649 KREVNTLLNREECMWRQRSRKKWLRWGDKNTSFFHHSATQRRRRNLISEIQDNHGNCYNS 708

BLAST of Tan0013829 vs. ExPASy TrEMBL
Match: A0A2N9IIR5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51703 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.4e-30
Identity = 85/257 (33.07%), Postives = 131/257 (50.97%), Query Frame = 0

Query: 85  MDDFREVLDECNLMDPGYQGHDFTWIRKVNNGPTTWERLDCFLLNIGYFTKWSQFQVIHL 144
           M  FR+VLDEC   D G+ G +FTW     NG T WERLD  ++N  +  ++ +  V H+
Sbjct: 573 MQAFRDVLDECGFQDLGFHGPEFTWCNNRINGATVWERLDRMVVNSEWLLRFQEATVYHI 632

Query: 145 GFYSSDHRPIFGYHTGEPKSNTKYEKGLIRFEPGWI--------------KNSEAKEI-- 204
               SDH P++         +    K L RFE  W+               NS+  ++  
Sbjct: 633 QGTLSDHMPLW---LSPSSVSITPRKKLFRFESMWLTDEGCRNTVEAAWRSNSDGPQMLQ 692

Query: 205 ------VCLTELKRWNQRRIGGSIRGAIQKKEAEI---KILESDLTQEKEEIWKRKMTEL 264
                 +C   L  W+ R+  GS+R  + +K +++   ++L        + +  R   EL
Sbjct: 693 VWNRVNLCRRRLSYWS-RQCFGSVRRMLAEKRSQLQQAELLSIQGGDHNQVVTLR--NEL 752

Query: 265 EDLLEEDNTYWRQRSREEWLQWGDRNTKWFHIRATTRRKKNLIKGIFNSSGDWITNEEEL 317
             LL ++ T W QRSR  WL+ GDRNT++FH RA+ RR++N I G+ + SGDW    +++
Sbjct: 753 SQLLTKEETMWSQRSRSHWLKEGDRNTRFFHSRASQRRRRNAILGLRDESGDWCDQPDQI 812

BLAST of Tan0013829 vs. ExPASy TrEMBL
Match: A0A2N9EDY7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS752 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.0e-30
Identity = 93/286 (32.52%), Postives = 147/286 (51.40%), Query Frame = 0

Query: 63  NKKARASEGSLENREVINSMENMDDFREVLDECNLMDPGYQGHDFTWIRKVNNGPTTWER 122
           N+  +A E    NR     M+    FR+ LDEC+LMD G++G  FTW    +   TTW R
Sbjct: 529 NEIIKAEEMHGRNRRPDRQMQG---FRDALDECDLMDLGFRGSPFTWCNNRDPPATTWVR 588

Query: 123 LDCFLLNIGYFTKWSQFQVIHLGFYSSDHRPIFGYHTGEPKSNTKYEKGLIRFEPGWIKN 182
           LD  + N+ +  K+S+  V HL   +SDH+ +    T EP++   +++   RFE  W  +
Sbjct: 589 LDRGVANLNWMQKFSEAVVEHLDVLNSDHKCLL--LTCEPRNVNCFQRKPFRFEEVWTSD 648

Query: 183 SEAKEIV----------------------CLTELKRWNQRRIGGSIRGAIQKKEAEIKIL 242
           +  +E +                      C  +L  W++++  GSI   +++K  E    
Sbjct: 649 AGCEETIQAAWDSAVPGSAMFRVAEKLKTCRRQLGDWSRKKF-GSITRQLREKREEFTEA 708

Query: 243 ESDLTQEKEEIWKRKM-TELEDLLEEDNTYWRQRSREEWLQWGDRNTKWFHIRATTRRKK 302
           E +  Q       RK+ +E+  LLE++   WRQRSR  WL+ GDRNT++FH RA+ RR++
Sbjct: 709 EKEAMQGGSLDKLRKLKSEVNFLLEKEERLWRQRSRVTWLREGDRNTRFFHGRASQRRRR 768

Query: 303 NLIKGIFNSSGDWITNEEELGRLATSHFAKLFRSNSPDSTAIEEVI 326
           N I G+ +  G W   + E   L   HF  +FR++ P++  IEE +
Sbjct: 769 NRIMGLQDDQGVWREEKSEFTGLIMQHFESIFRTSIPEN--IEEAV 806

BLAST of Tan0013829 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 6.8e-09
Identity = 47/225 (20.89%), Postives = 93/225 (41.33%), Query Frame = 0

Query: 339 YDYFWWIMDRGN-----KEELHVFIIILWKIWNNRNDTVSDVNTDTDWDRWRRTTQMTIN 398
           Y   +W+ + GN     ++   +   +LW++W NRN+ V          R R      + 
Sbjct: 337 YVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVF---------RGREFNAQEVL 396

Query: 399 ELTQNPISRARVRLGSQNI---PQ-------QWSPPTQGWWSLCTDASWSDELNSGGIGW 458
              ++ +   R+R  +++    PQ       +W PP   W    TDA+W+ +    GIGW
Sbjct: 397 RRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGW 456

Query: 459 MVRNWEGHVICAGHSCINTYWPILVMELFGIIKGMRSITDKGIPLMVESDSLEAILLIEG 518
           ++RN +G V   G   +     +L  EL  +   + S++      ++     + ++ I  
Sbjct: 457 VLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILN 516

Query: 519 KIEDCTEARDFTDIIHNMREDWNDIMFRHIPRSSNQEAHKLAQRA 549
             E     +     +  +   + ++ F  IPR  N  A ++A+ +
Sbjct: 517 NDEIWPSLKPTIQDLQRLLSQFTEVKFVFIPREGNTLAERVARES 552

BLAST of Tan0013829 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 1.1e-06
Identity = 57/266 (21.43%), Postives = 112/266 (42.11%), Query Frame = 0

Query: 82  MENMDDFREVLDECNLMDPGYQGHDFTWIRKVNNGPTTWERLDCFLLNIGYFTKWSQFQV 141
           M  +++F+  L + +L+D   +G  +TW    ++ P    +LD  + N  +F+ +     
Sbjct: 246 MRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPII-RKLDRAIANGDWFSSFPSAIA 305

Query: 142 IHLGFYSSDHRPIFGYHTGEPKSNTK----------YEKGLIRFEPGWIKN--------S 201
           +      SDH P        PK + K          +   L+     W +         S
Sbjct: 306 VFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFS 365

Query: 202 EAKEIVCLTELKRWNQRRIGGSIR-------GAIQKKEAEIKILESDLTQEKEEIWKRKM 261
             + +    +  +   R+  G+I+        +++  ++++    SD     E + ++K 
Sbjct: 366 LGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARKKW 425

Query: 262 TELEDLLEEDNTYWRQRSREEWLQWGDRNTKWFHIRATTRRKKNLIKGIFNSSGDWITNE 319
                 LE   +++RQ+SR +WLQ GD NT++FH      + KNLIK +       + N 
Sbjct: 426 NFFAAALE---SFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENV 485

BLAST of Tan0013829 vs. TAIR 10
Match: AT2G33160.1 (glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein )

HSP 1 Score: 49.3 bits (116), Expect = 1.2e-05
Identity = 43/149 (28.86%), Postives = 65/149 (43.62%), Query Frame = 0

Query: 360 ILWKIWNNRNDTVSDVNTDTDWDRWRRTTQMTINE----LTQNPISRARVRLGSQNIPQQ 419
           ILW++WN+RN  +        W+   +  QM + E    +T + I+     + S +IP  
Sbjct: 446 ILWRLWNSRN-ILYFQRRHVPWETTLQLAQMDLQEWNEAVTPSHINSHGTTIRS-HIP-N 505

Query: 420 WSPPTQGWWSLCTDASWSDELNSGGIGWMVRNWEGHVICAGHSCINTYWPILVMELFGII 479
           W  PT GW     D S+ +    G  GW+VR+  G    AG +  N     L  E   ++
Sbjct: 506 WRRPTNGWVKCNVDGSFINGNIPGKGGWIVRDHNGRYEFAGQAIGNCIDNALECEFQALL 565

Query: 480 KGMRSITDKGI-PLMVESDSLEAILLIEG 504
             M+    KG   +  E D+ E   LI G
Sbjct: 566 MAMQHCWSKGYRRICFEGDNKEMFDLING 591

BLAST of Tan0013829 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 6.6e-04
Identity = 54/218 (24.77%), Postives = 92/218 (42.20%), Query Frame = 0

Query: 360 ILWKIWNNRNDTVSDVNTDTDWDRWRRTTQMTIN---ELTQNPISRARVRLGSQNIP--- 419
           ++W+IW + ND V + +T T   +++ T +M +N   E   N ++  + + G++N     
Sbjct: 47  LMWRIWKSGNDLVFN-HTRT---KFQTTVEMALNDTKEWLDNTMTNEQ-QNGNRNADPSR 106

Query: 420 -QQWSPPTQGWWSLCTDASWSDELNSGGIGWMVRNWEGHVICAG------------HSCI 479
             +WSPP +       DAS  +     G+GW++RN +G VI  G              C 
Sbjct: 107 NTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECS 166

Query: 480 NTYWPILVMELFGIIKGMRSITDKGIPLMVESDSLEAILLIEGKIEDCTEARDFTDIIHN 539
              W I     FG  K           ++ E D+     +I  K  +    + F D I +
Sbjct: 167 TLIWAIQASYGFGHKK-----------VIFEGDNQTITRMINTKSSN-PRLQHFLDTIQS 226

Query: 540 MREDWNDIMFRHIPRSSNQEAHKLAQRASHLQQDEIWS 559
               +  I F    R  N  A  LA++A  ++++  WS
Sbjct: 227 WIPSFESIEFSFKHREQNGCADFLAKQA--IKENTQWS 245

BLAST of Tan0013829 vs. TAIR 10
Match: AT4G09775.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 8.6e-04
Identity = 29/132 (21.97%), Postives = 58/132 (43.94%), Query Frame = 0

Query: 361 LWKIWNNRNDTVSDVNTDTDWDRWRRTTQ-------MTINELTQNPISRARVRLGSQNIP 420
           +W++W +RN+ +        W   ++  Q        TIN+ T N  S  +         
Sbjct: 1   MWRLWKSRNEFLFQQIDRFPWKVAQKGEQEATEWVETTIND-TANSHSTEQPNDRPSGRS 60

Query: 421 QQWSPPTQGWWSLCTDASWSDELNSGGIGWMVRNWEGHVICAGHSCINTYWPILVMELFG 480
           ++WSPP +G+     D+ +    +     W++R+  GHVI +G + +   +  L  E  G
Sbjct: 61  KEWSPPPEGYLKCNFDSGYVQGRDYTSTCWIIRDSNGHVIHSGCAKLQQSYSALQAEALG 120

Query: 481 IIKGMRSITDKG 486
            +  ++ +  +G
Sbjct: 121 FLHALQMVWIRG 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_030924745.11.0e-3030.94uncharacterized protein LOC115951731 [Quercus lobata][more]
XP_030923017.11.0e-3031.85uncharacterized protein LOC115949892 [Quercus lobata][more]
XP_023896927.12.5e-2930.74uncharacterized protein LOC112008817 [Quercus suber][more]
XP_030969743.17.2e-2930.54uncharacterized protein LOC115990020 [Quercus lobata][more]
XP_023911628.19.4e-2932.44uncharacterized protein LOC112023240 [Quercus suber][more]
Match NameE-valueIdentityDescription
A0A2N9I9215.8e-3232.30Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9J1096.4e-3133.33Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58001 PE=4 SV=1[more]
A0A2N9IXK41.4e-3032.57RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57484 ... [more]
A0A2N9IIR55.4e-3033.07Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51703 PE=4 SV=1[more]
A0A2N9EDY77.0e-3032.52Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
Match NameE-valueIdentityDescription
AT4G29090.16.8e-0920.89Ribonuclease H-like superfamily protein [more]
AT1G43760.11.1e-0621.43DNAse I-like superfamily protein [more]
AT2G33160.11.2e-0528.86glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family pro... [more]
AT5G65005.16.6e-0424.77Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT4G09775.18.6e-0421.97BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily prot... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 210..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..43
NoneNo IPR availablePANTHERPTHR47723OS05G0353850 PROTEINcoord: 395..564
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 428..548
e-value: 4.3E-18
score: 65.3
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 423..551
e-value: 5.0E-13
score: 51.1
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 428..545
e-value: 2.28458E-19
score: 81.9768
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 423..554
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 81..155

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0013829.1Tan0013829.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity