Tan0013641 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACAGAATTGAAAGCAGCTACTGAGGAAGTGAAAGTTGATCTCTTTGAGGATGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGGTATGACGTGTAATTATTTGTCTTTATTTTATTCCTTCCCGTGTTTGGATTCTGTTAGGAATCAAAACACAGAAAGTACAAATAACACTAAGAAACTGATATATTGCAATAACTATGAAGAAATTACAATACCCAATAGCCTTTCGAAAGGGTTATCTCTCTCCCAAGTCCCACAATGGACTCTCTACCAAAATGATCCACACCCAAAAAAGGACCATCACACTACTATTTATAAGCAAGACACCTATAACTAATTACTCAAATACCCCTTACTGATATACTATTAATCTCCCATATATACTCCATAGAATACCATACTAGTACTCTCACACTACTCCGCCCTTCAAAGACACCTTGTCCTCAAGGTGTGCTTAACCAAACACAAACAAACAACACAATTTTTTTTTTGTCTTTTTTAATCGAGAAACCAAAACTCTAACGCCCTTCAGAAGAAGAAAACTAGCCATTCTTTAAGACCAAAAGTAGCTGGTTGGCACTTTCTTGCAATGTGTGGGTGATGGTGGCTAAGATCGGTAGTCGGTGGTGGAAGATTCGGTGGACGTCGACGGAAAGTGGCAATGGTCTTTATAGCTGACAGAGGTGGTTGCAACGGTTGGTGATGGGTGACAATGGTCGGAGACGACAGATGGCGGTGATGGTCGGTGGTATGAATATGCCCTGTGGCCATGGTTGTCGACACTAGCGTAGAAGATATTAGAGGCTAGGGCTACTTCCTTCAAAAGGGTAGGCCATCTGCTATTTTTTGGGGGTTTAAAACAAAATACAACCCATCCCAAGAGCCCAACTTGAAACCCAACGAGATTTTCTATTATTGACAAAGAATGGCCCTTGCCCCTACCCTTTAAGCCCAACCCATTAAAAAATAACATGTCAAGCTCTTGCTCAAAAAGCCCATGATCTCTTCCACTTCTAGAATCATCTAATTCCACGTGATTAGGGTTGGGGTTTATCAACCCATCGATTTTCTGGCTTCTTCTTCTTTTTCTTTTTCCTCTGTGGCTCACCAATTTGTTACCTGTCAGTCTATGATATTTGCCTTGACAACTTCCCTTTGGCTTCAACTTCGACCATACACGTAATTGTCGCTGGTAATGGCCTCTATCGGTGGTTTCCGTTTCTTCATGCCTCTTGAGTCAGCTCTTCCATGAATTGTTCTCCAACCATTTCAACATCTACTACCCACATTGGCCTCCCTAGACCGATTCCCTTCGTTCTCCAATAAAATGGTTAGTTTCGTTGATTTTTCTTCCCCTACTTGATGGCTCTGTTCTCACCCTGAACAAACTCTCATTCTTCATCTTTCTTTGCTTGTGTTTTTCTTTCATAGTCTCGATTTGTGGAGCTTGCTTGGTATTGTGTCGTGATACTTTCTCCTTGTAACTTCTCCTTTCCTGCGATCATCATCATTAAAGCCTTATGGTTCTCCCTCATTTCTTCTGTTTGTCTCCGCAGACTTTCTTTTGCTTCTTCCAAACTCCTCTGGTTCTCATTCACTCGGTTTGATAAAATTCCCATGTTCTTCGTCAGTTCCCAAACCGCAACTCGAAGATCACTAACGTGTCTCTTTGTTCCTTCTACTCTTTCTTCCATTTGTCTATGTGCCATTTTCCTCGTTCTCCCCAAGATGTGACATTCTCTGATACCAATTTGTTAAGTATCCAAATACAGAAAATACAAATAACACTAAGAAACTGATATATTGCAATAACTATAAAGAAATTACAATACCCAATAGCCTTTCGAGAGGGCTATCTCTCTCCTAAGTCCCACAATGGACTCTCTACCAAAATGATCCACACCCAAAAAGGACCCTCACACTACTATTTATAAGCAAGACACCTATAACTAATTACTCAAATACCCCTTACTAATATACTATTAATCTCCCACATATACTCCATAGAATACCATACTAGTACTCTCAGAGATTCCTTCACCATTGGTTTCAATTTGCACTCATTTTTCATTTATCAATGCTTGTCATGCAATTTCTCCTTTGTTTTAGCCAAAAGAATGTGAATGCTATGCAACGGTCTGGATAATCCTGTTACAGACTCAATCCTAACTGCTAGCATTCTTCATTTGGATGCCGTATTACTGTTGTTTTGTTCACTTACTATTTCACAGCAAATTCTTGGAATCCTGTGTTCGAAAAATGAGCTAGAATGTTTGTACATTCAATAACAATAGTTACAATCAATGAAAAAATAGTATTCATTAGGATAAAGAAGAGTTGGAATAATGCATGGTTTTTAAAAGATATGCCCCTTAACTCCTTAAGTATACTATATTCAGATGGGTACTTTTCTCTTGAAGGTATTAAAATCGTCTAGATGTTTGCTTTAAGTTGATATAATTACTTGTGAAAAACAGTTAATAGAATTACATCTTTTCCCAAAGACAAGAAGTTTGTTGGGAGTTAATTTCTTTCGTAACATTACATATTCCTTGTGTGCTCAAAAGTACTAGTAGTAGTGTACATAAGGAAGTTGGTGGAATAGCTTTCGAATGGAGTTTGTGGTTGCTTTCTGAACAGTTAGATTTTGCTTTGATTGCTGAAATGAACTTTGCAGAATAAACTTTCTCCAATTTTATGTTTATCCAAAAAACTTGATGACCTAAAACCACTTCTCTTTGTTCAGTGGAAGTGGGCACTTTTCTTTATTATTCAGAAGTGGTTACGGTTACTTTGTTAGGAAGCAAATAAAGAATCTTGAGTTTGACATTCAAAAGTGTCTTATCAAAAGTGTTTTAACCAATCTTATGCTTAAGTGCACCTTAACTAGACAACCACTTGACTTTGATCAATTTCATGCTTAAGTGAACGTTAACTAATCTCATTGGACAACTGCTTGATCCTATAAAGTTATAATTTGTGACTGCCAAGAACTTATGAGATTTTATTCTATGTAGGTGACCACCTTGTGGTTTTGAACACATTCCCCCAAAGTCTTTACTTTTTCACATGCACCGTTGCCACTAGGGCAACTCAGAGTGATTCTGGTTTGAGAGCATATAGAAGGTGGAACTTTGTAATATGTATATCATCATATATGTCATAGTCCTAGTCCTAGCTAGATATTGCTATTAAGCATAGAATTTAGAGATCTCTTCTTTCCTTTCAAAGTTCTTTTGCAAGTCTAATTTTCCTCAGAGTTTGGTGTAAACCTCTGCTTCTTGTTCTTTGCATAAAATCTCAAAGTTTTTTTGTTCATGGCATAACATCTTTATGCCTACTGTATTTTTATAACCGTTCCTTCTGTTCTGATTGGTAAAATCGATTACAGAGTGGGAAGTCAAGGATAGTAAAGAAATTACTCAGCAATGGGAAGATGACTGGGATGATGATGATGTCAATGACGACTTCTCGTTGCAGCTTAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGA ATGGCAACAGAATTGAAAGCAGCTACTGAGGAAGTGAAAGTTGATCTCTTTGAGGATGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAGGATAGTAAAGAAATTACTCAGCAATGGGAAGATGACTGGGATGATGATGATGTCAATGACGACTTCTCGTTGCAGCTTAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGA ATGGCAACAGAATTGAAAGCAGCTACTGAGGAAGTGAAAGTTGATCTCTTTGAGGATGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAGGATAGTAAAGAAATTACTCAGCAATGGGAAGATGACTGGGATGATGATGATGTCAATGACGACTTCTCGTTGCAGCTTAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGA MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK Homology
BLAST of Tan0013641 vs. ExPASy Swiss-Prot
Match: Q9FL96 (Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 8.1e-21 Identity = 55/73 (75.34%), Postives = 63/73 (86.30%), Query Frame = 0
BLAST of Tan0013641 vs. ExPASy Swiss-Prot
Match: Q9XIR8 (Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana OX=3702 GN=DSS1(I) PE=1 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.4e-20 Identity = 55/74 (74.32%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of Tan0013641 vs. ExPASy Swiss-Prot
Match: Q3ZBR6 (26S proteasome complex subunit SEM1 OS=Bos taurus OX=9913 GN=SEM1 PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 2.5e-06 Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 0
BLAST of Tan0013641 vs. ExPASy Swiss-Prot
Match: P60896 (26S proteasome complex subunit SEM1 OS=Homo sapiens OX=9606 GN=SEM1 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 2.5e-06 Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 0
BLAST of Tan0013641 vs. ExPASy Swiss-Prot
Match: P60897 (26S proteasome complex subunit SEM1 OS=Mus musculus OX=10090 GN=Sem1 PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 2.5e-06 Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 0
BLAST of Tan0013641 vs. NCBI nr
Match: XP_004144232.1 (protein DSS1 HOMOLOG ON CHROMOSOME V [Cucumis sativus] >XP_008464856.1 PREDICTED: protein DSS1 HOMOLOG ON CHROMOSOME V-like [Cucumis melo] >KGN47541.1 hypothetical protein Csa_019014 [Cucumis sativus]) HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27 Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Tan0013641 vs. NCBI nr
Match: XP_023546762.1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 130.6 bits (327), Expect = 5.5e-27 Identity = 68/72 (94.44%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Tan0013641 vs. NCBI nr
Match: XP_022999790.1 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima]) HSP 1 Score: 130.2 bits (326), Expect = 7.2e-27 Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of Tan0013641 vs. NCBI nr
Match: KAG6599102.1 (Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 128.3 bits (321), Expect = 2.8e-26 Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of Tan0013641 vs. NCBI nr
Match: XP_022153100.1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like [Momordica charantia] >XP_022153101.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like [Momordica charantia]) HSP 1 Score: 127.9 bits (320), Expect = 3.6e-26 Identity = 65/72 (90.28%), Postives = 69/72 (95.83%), Query Frame = 0
BLAST of Tan0013641 vs. ExPASy TrEMBL
Match: A0A0A0KIG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358050 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.4e-28 Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Tan0013641 vs. ExPASy TrEMBL
Match: A0A1S3CMK4 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucumis melo OX=3656 GN=LOC103502626 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.4e-28 Identity = 69/72 (95.83%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Tan0013641 vs. ExPASy TrEMBL
Match: A0A6J1KGK6 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita maxima OX=3661 GN=LOC111494033 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.5e-27 Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0
BLAST of Tan0013641 vs. ExPASy TrEMBL
Match: A0A6J1DJN7 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Momordica charantia OX=3673 GN=LOC111020683 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26 Identity = 65/72 (90.28%), Postives = 69/72 (95.83%), Query Frame = 0
BLAST of Tan0013641 vs. ExPASy TrEMBL
Match: A0A6J1KMT1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucurbita maxima OX=3661 GN=LOC111496037 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.0e-26 Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0
BLAST of Tan0013641 vs. TAIR 10
Match: AT5G45010.1 (DSS1 homolog on chromosome V ) HSP 1 Score: 100.5 bits (249), Expect = 5.7e-22 Identity = 55/73 (75.34%), Postives = 63/73 (86.30%), Query Frame = 0
BLAST of Tan0013641 vs. TAIR 10
Match: AT1G64750.1 (deletion of SUV3 suppressor 1(I) ) HSP 1 Score: 99.8 bits (247), Expect = 9.8e-22 Identity = 55/74 (74.32%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of Tan0013641 vs. TAIR 10
Match: AT1G64750.2 (deletion of SUV3 suppressor 1(I) ) HSP 1 Score: 99.8 bits (247), Expect = 9.8e-22 Identity = 55/74 (74.32%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of Tan0013641 vs. TAIR 10
Match: AT1G64750.3 (deletion of SUV3 suppressor 1(I) ) HSP 1 Score: 79.7 bits (195), Expect = 1.0e-15 Identity = 55/115 (47.83%), Postives = 64/115 (55.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|