Tan0013026 (gene) Snake gourd v1

Overview


Name	Tan0013026
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Coiled-coil domain-containing protein SCD2
Location	LG06: 19318362 .. 19319744 (-)
RNA-Seq Expression	Tan0013026
Synteny	Tan0013026

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAAAGGTTCTTCTCGGTGCGGCAAATCCATACTCACTGCGGCTCTTCCCACTCAATCATGCTTGTTTCAGGGCCTCCTTCCTGGTATTGACCCATATCCTTCTGTTGCTTCTTCTTCAATTCTTTGAAATTCATTCTAGTTTCCTTCAAAATTTGCAGCGGAAAAACTTCTTTGCTTTTTCAGTTCGCTTTTAATTTGGGTTTGGAGGGAAATGTTACCTTCATCTGCAACCGTCGCAAATTAGAGAATAAACCTCCATATCTCTCGCAGGCATGTCTTTCTCTGTTTCTGTCTCTGTGCTGTGTGTTGTGGTTATATTGAATCGAATAGAATGTTGCATATTTTCTGAAACTTGGAGCCCTTTGGGCTTAACATCCAGGGAGTTGATCCAACATCCGAAACCTTTCAGCGCATACAAATGAAGTCGGTGATAATTGCATTCTTTCTCCTAATTGTGGATTTGATATTTGATGATTGTAAGCTTTTCCCCGTCCTTCAGTTCCTTTACTTGAACCTGTATTTTCTAATTCTGAATTCCAAGGTATTTGGAGGACGACGAAGGAATTAAGAAGTACTTCTCTGCATTTCACCTGCATCGTACATTTCCTGTGGCAGTTGTGATTGATGATTTTGGAGATTTTTTCGAGGAAAGGTCTTCATATCTCCCATCCTTTTATTTTTTTCACTTCCATTCATTTGTACTCAAGTTTCTGTTTTTCTTTTTCACTTCACCATCTCTTTAAAAGGCGATGTCAAGAAAAATATGCCAATCCTCGCGGAAGAGATTTAGCAATGGTTAGAACACTAGCTCTTTGTCACAATGCTGTGAGCCTAGCAAAGTAGGTTTGCATCTGTCAGAACTTTCAATGAATAAATTAATCTCTTAGATGGCACCCTCTTCTGTGCTGGTTCTGACTTGAAAGATTTTACAGTCAAAGTAGACCTTGCCAGCTTGTGTTGTCTGATACACACCACGGAGAGTCCCCAAGGTTGATATTCATTTATAAGAGATGGGTTCCAACCATTTTCACCATTAGAGGTTAGTTTCAGCTGACTGACTGCTCAACCCAAATTCAAAGCAGTTGCCCTTGTTTTTTGTTATTTCTGTTTTACATGGAAATTTCAGAAAATACAGATGATAAGTGGAGCAAACTGATTGTGTGGCCTTCGTGATGGTTAATTGATATGCCATTTTGACCTTCTGTTATTGAATTAATTTTGGGTTTTGTTGAAGGTGATGGATCTGGATGGTTCATCCTGAGAAGTATTAACAATTGTGGAAATGACTGTTGCTTGAAGACTAGAAGTGCAAAATACTCGATTGCTCTTCAGTTTCTGAGTTTGGAGGAAATTTCTGAAGATAGTAGAGAACAATGA

mRNA sequence

ATGATGGAAAGGTTCTTCTCGGTGCGGCAAATCCATACTCACTGCGGCTCTTCCCACTCAATCATGCTTGTTTCAGGGCCTCCTTCCTGCGGAAAAACTTCTTTGCTTTTTCAGTTCGCTTTTAATTTGGGTTTGGAGGGAAATGTTACCTTCATCTGCAACCGTCGCAAATTAGAGAATAAACCTCCATATCTCTCGCAGGGAGTTGATCCAACATCCGAAACCTTTCAGCGCATACAAATGAAGTATTTGGAGGACGACGAAGGAATTAAGAAGTACTTCTCTGCATTTCACCTGCATCGTACATTTCCTGTGGCAGTTGTGATTGATGATTTTGGAGATTTTTTCGAGGAAAGGCGATGTCAAGAAAAATATGCCAATCCTCGCGGAAGAGATTTAGCAATGGTTAGAACACTAGCTCTTTGTCACAATGCTGTGAGCCTAGCAAATCAAAGTAGACCTTGCCAGCTTGTGTTGTCTGATACACACCACGGAGAGTCCCCAAGGTTGATATTCATTTATAAGAGATGGGTTCCAACCATTTTCACCATTAGAGGTGATGGATCTGGATGGTTCATCCTGAGAAGTATTAACAATTGTGGAAATGACTGTTGCTTGAAGACTAGAAGTGCAAAATACTCGATTGCTCTTCAGTTTCTGAGTTTGGAGGAAATTTCTGAAGATAGTAGAGAACAATGA

Coding sequence (CDS)

ATGATGGAAAGGTTCTTCTCGGTGCGGCAAATCCATACTCACTGCGGCTCTTCCCACTCAATCATGCTTGTTTCAGGGCCTCCTTCCTGCGGAAAAACTTCTTTGCTTTTTCAGTTCGCTTTTAATTTGGGTTTGGAGGGAAATGTTACCTTCATCTGCAACCGTCGCAAATTAGAGAATAAACCTCCATATCTCTCGCAGGGAGTTGATCCAACATCCGAAACCTTTCAGCGCATACAAATGAAGTATTTGGAGGACGACGAAGGAATTAAGAAGTACTTCTCTGCATTTCACCTGCATCGTACATTTCCTGTGGCAGTTGTGATTGATGATTTTGGAGATTTTTTCGAGGAAAGGCGATGTCAAGAAAAATATGCCAATCCTCGCGGAAGAGATTTAGCAATGGTTAGAACACTAGCTCTTTGTCACAATGCTGTGAGCCTAGCAAATCAAAGTAGACCTTGCCAGCTTGTGTTGTCTGATACACACCACGGAGAGTCCCCAAGGTTGATATTCATTTATAAGAGATGGGTTCCAACCATTTTCACCATTAGAGGTGATGGATCTGGATGGTTCATCCTGAGAAGTATTAACAATTGTGGAAATGACTGTTGCTTGAAGACTAGAAGTGCAAAATACTCGATTGCTCTTCAGTTTCTGAGTTTGGAGGAAATTTCTGAAGATAGTAGAGAACAATGA

Protein sequence

MMERFFSVRQIHTHCGSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTFPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGWFILRSINNCGNDCCLKTRSAKYSIALQFLSLEEISEDSREQ

Homology

[Close]

BLAST of Tan0013026 vs. NCBI nr
Match: XP_038906786.1 (uncharacterized protein LOC120092706 isoform X1 [Benincasa hispida])

HSP 1 Score: 459.1 bits (1180), Expect = 2.2e-125
Identity = 217/231 (93.94%), Postives = 222/231 (96.10%), Query Frame = 0


Query: 2   MERFFSVRQIHTHCGSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 61
           ME+FFSVRQIHTHC SSHSIMLVSGPPSCGKTSLLFQFAFNLGL+GNVTFICNRRKLENK
Sbjct: 29  MEKFFSVRQIHTHCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLKGNVTFICNRRKLENK 88

Query: 62  PPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTFPVAVVIDDFGDFFEERRC 121
           PPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRT PVAVVIDDFGDFFEERRC
Sbjct: 89  PPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 148

Query: 122 QEKYANPRGRDLAMVRTLALCHNAVSLANQSRPCQLVLSDTHHGESPRLIFIYKRWVPTI 181
           Q+KYANPRGRDLAMVRTLALCHNAVSLAN SRPCQLVLSD +HGESPRLIFIYKRWVPTI
Sbjct: 149 QDKYANPRGRDLAMVRTLALCHNAVSLANPSRPCQLVLSDAYHGESPRLIFIYKRWVPTI 208

Query: 182 FTIRGDGSGWFILRSINNCGNDCCLKTRSAKYSIALQFLSLEEISEDSREQ 233
           FTI GDG GWF LRSINNCGNDCCL+ RSAKYSIALQFLSLEEISEDS EQ
Sbjct: 209 FTITGDGFGWFTLRSINNCGNDCCLRARSAKYSIALQFLSLEEISEDSSEQ 259

[Close]

BLAST of Tan0013026 vs. NCBI nr
Match: XP_011656789.1 (uncharacterized protein LOC101205665 [Cucumis sativus] >KAE8646754.1 hypothetical protein Csa_004885 [Cucumis sativus])

HSP 1 Score: 458.8 bits (1179), Expect = 2.9e-125
Identity = 217/231 (93.94%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 2   MERFFSVRQIHTHCGSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 61
           ME+FFSV+QIHTHC SSHSI LVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK
Sbjct: 15  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 74

Query: 62  PPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTFPVAVVIDDFGDFFEERRC 121
           PPYLSQGVDPTSETFQRIQMKYLEDD+GIKKYFSAFHLH T PVAVVIDDFGDFFEERRC
Sbjct: 75  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 134

Query: 122 QEKYANPRGRDLAMVRTLALCHNAVSLANQSRPCQLVLSDTHHGESPRLIFIYKRWVPTI 181
           QEKYANPRGRDLAMVRTLALC NAVSLANQ RPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 135 QEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 194

Query: 182 FTIRGDGSGWFILRSINNCGNDCCLKTRSAKYSIALQFLSLEEISEDSREQ 233
           FTIRGDG+GWFILRSINNCG DCCL+T+ AKYSIALQFLSLEEISEDSREQ
Sbjct: 195 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 245

[Close]

BLAST of Tan0013026 vs. NCBI nr
Match: XP_008459907.1 (PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >XP_008459908.1 PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >ADN33703.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 456.1 bits (1172), Expect = 1.9e-124
Identity = 214/231 (92.64%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 2   MERFFSVRQIHTHCGSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 61
           ME+FFSV+QIHT C SSHSI LVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK
Sbjct: 1   MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 62  PPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTFPVAVVIDDFGDFFEERRC 121
           PPYLSQGVDPTSETF+RIQMKYLEDD+GIKKYFSAFHLH T PVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 122 QEKYANPRGRDLAMVRTLALCHNAVSLANQSRPCQLVLSDTHHGESPRLIFIYKRWVPTI 181
           Q KYANPRGRD+AMVRTLALCHNAVSLANQ RPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 182 FTIRGDGSGWFILRSINNCGNDCCLKTRSAKYSIALQFLSLEEISEDSREQ 233
           FTIRGDG+GWFILRSINNCGNDCCL+T+ AKYSIALQFLSLEEISEDSRE+
Sbjct: 181 FTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

[Close]

BLAST of Tan0013026 vs. NCBI nr
Match: XP_022959968.1 (uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_022959970.1 uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_022959971.1 uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata])

HSP 1 Score: 453.8 bits (1166), Expect = 9.2e-124
Identity = 214/228 (93.86%), Postives = 219/228 (96.05%), Query Frame = 0


Query: 4   RFFSVRQIHTHCGSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 63
           RFFSVRQI T C SSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP
Sbjct: 6   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 65

Query: 64  YLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTFPVAVVIDDFGDFFEERRCQE 123
           YLSQGVDP SETFQRIQMKYLEDDEGI KYFSAFHLHRT PVAVVIDDFGDFFEERRCQE
Sbjct: 66  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 125

Query: 124 KYANPRGRDLAMVRTLALCHNAVSLANQSRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 183
           KYANPRGRDLAMVRTLALCHNA+SLANQ RPCQLVLSDTHHGESPRLIFIYKRWVPTIFT
Sbjct: 126 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 185

Query: 184 IRGDGSGWFILRSINNCGNDCCLKTRSAKYSIALQFLSLEEISEDSRE 232
           IRGDGSGWFILRSINNCGN+CCL+T+SAKYSIALQFLSLEE+SED  E
Sbjct: 186 IRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 233

[Close]

BLAST of Tan0013026 vs. NCBI nr
Match: KAA0039853.1 (uncharacterized protein E6C27_scaffold122G001280 [Cucumis melo var. makuwa])

HSP 1 Score: 453.0 bits (1164), Expect = 1.6e-123
Identity = 213/231 (92.21%), Postives = 222/231 (96.10%), Query Frame = 0


Query: 2   MERFFSVRQIHTHCGSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 61
           ME+FFSV+QIHT C SSHSI LVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK
Sbjct: 56  MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 115

Query: 62  PPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTFPVAVVIDDFGDFFEERRC 121
           PPYLSQGVDPTSETF+RIQMKYLEDD+GIKKYFSAFHLH T PVAVVIDDFGDFFEERRC
Sbjct: 116 PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 175

Query: 122 QEKYANPRGRDLAMVRTLALCHNAVSLANQSRPCQLVLSDTHHGESPRLIFIYKRWVPTI 181
           Q KYANPRGRD+AMVRTLALCHNAVSLANQ RPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 176 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 235

Query: 182 FTIRGDGSGWFILRSINNCGNDCCLKTRSAKYSIALQFLSLEEISEDSREQ 233
           FTIRGDG+ WFILRSINNCGNDCCL+T+ AKYSIALQFLSLEEISEDSRE+
Sbjct: 236 FTIRGDGTRWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 286

[Close]

BLAST of Tan0013026 vs. ExPASy TrEMBL
Match: A0A0A0K9H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091880 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.4e-125
Identity = 217/231 (93.94%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 2   MERFFSVRQIHTHCGSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 61
           ME+FFSV+QIHTHC SSHSI LVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK
Sbjct: 1   MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 62  PPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTFPVAVVIDDFGDFFEERRC 121
           PPYLSQGVDPTSETFQRIQMKYLEDD+GIKKYFSAFHLH T PVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 122 QEKYANPRGRDLAMVRTLALCHNAVSLANQSRPCQLVLSDTHHGESPRLIFIYKRWVPTI 181
           QEKYANPRGRDLAMVRTLALC NAVSLANQ RPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 182 FTIRGDGSGWFILRSINNCGNDCCLKTRSAKYSIALQFLSLEEISEDSREQ 233
           FTIRGDG+GWFILRSINNCG DCCL+T+ AKYSIALQFLSLEEISEDSREQ
Sbjct: 181 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 231

[Close]

BLAST of Tan0013026 vs. ExPASy TrEMBL
Match: A0A1S3CAT0 (uncharacterized protein LOC103498887 OS=Cucumis melo OX=3656 GN=LOC103498887 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 9.0e-125
Identity = 214/231 (92.64%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 2   MERFFSVRQIHTHCGSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 61
           ME+FFSV+QIHT C SSHSI LVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK
Sbjct: 1   MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 62  PPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTFPVAVVIDDFGDFFEERRC 121
           PPYLSQGVDPTSETF+RIQMKYLEDD+GIKKYFSAFHLH T PVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 122 QEKYANPRGRDLAMVRTLALCHNAVSLANQSRPCQLVLSDTHHGESPRLIFIYKRWVPTI 181
           Q KYANPRGRD+AMVRTLALCHNAVSLANQ RPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 182 FTIRGDGSGWFILRSINNCGNDCCLKTRSAKYSIALQFLSLEEISEDSREQ 233
           FTIRGDG+GWFILRSINNCGNDCCL+T+ AKYSIALQFLSLEEISEDSRE+
Sbjct: 181 FTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

[Close]

BLAST of Tan0013026 vs. ExPASy TrEMBL
Match: E5GB61 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 9.0e-125
Identity = 214/231 (92.64%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 2   MERFFSVRQIHTHCGSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 61
           ME+FFSV+QIHT C SSHSI LVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK
Sbjct: 1   MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 62  PPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTFPVAVVIDDFGDFFEERRC 121
           PPYLSQGVDPTSETF+RIQMKYLEDD+GIKKYFSAFHLH T PVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 122 QEKYANPRGRDLAMVRTLALCHNAVSLANQSRPCQLVLSDTHHGESPRLIFIYKRWVPTI 181
           Q KYANPRGRD+AMVRTLALCHNAVSLANQ RPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 182 FTIRGDGSGWFILRSINNCGNDCCLKTRSAKYSIALQFLSLEEISEDSREQ 233
           FTIRGDG+GWFILRSINNCGNDCCL+T+ AKYSIALQFLSLEEISEDSRE+
Sbjct: 181 FTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

[Close]

BLAST of Tan0013026 vs. ExPASy TrEMBL
Match: A0A6J1H6C8 (uncharacterized protein LOC111460863 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460863 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 4.5e-124
Identity = 214/228 (93.86%), Postives = 219/228 (96.05%), Query Frame = 0


Query: 4   RFFSVRQIHTHCGSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 63
           RFFSVRQI T C SSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP
Sbjct: 6   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 65

Query: 64  YLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTFPVAVVIDDFGDFFEERRCQE 123
           YLSQGVDP SETFQRIQMKYLEDDEGI KYFSAFHLHRT PVAVVIDDFGDFFEERRCQE
Sbjct: 66  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 125

Query: 124 KYANPRGRDLAMVRTLALCHNAVSLANQSRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 183
           KYANPRGRDLAMVRTLALCHNA+SLANQ RPCQLVLSDTHHGESPRLIFIYKRWVPTIFT
Sbjct: 126 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 185

Query: 184 IRGDGSGWFILRSINNCGNDCCLKTRSAKYSIALQFLSLEEISEDSRE 232
           IRGDGSGWFILRSINNCGN+CCL+T+SAKYSIALQFLSLEE+SED  E
Sbjct: 186 IRGDGSGWFILRSINNCGNECCLRTKSAKYSIALQFLSLEEVSEDITE 233

[Close]

BLAST of Tan0013026 vs. ExPASy TrEMBL
Match: A0A5A7T9Y8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001280 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.6e-124
Identity = 213/231 (92.21%), Postives = 222/231 (96.10%), Query Frame = 0


Query: 2   MERFFSVRQIHTHCGSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 61
           ME+FFSV+QIHT C SSHSI LVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK
Sbjct: 56  MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 115

Query: 62  PPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTFPVAVVIDDFGDFFEERRC 121
           PPYLSQGVDPTSETF+RIQMKYLEDD+GIKKYFSAFHLH T PVAVVIDDFGDFFEERRC
Sbjct: 116 PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 175

Query: 122 QEKYANPRGRDLAMVRTLALCHNAVSLANQSRPCQLVLSDTHHGESPRLIFIYKRWVPTI 181
           Q KYANPRGRD+AMVRTLALCHNAVSLANQ RPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 176 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 235

Query: 182 FTIRGDGSGWFILRSINNCGNDCCLKTRSAKYSIALQFLSLEEISEDSREQ 233
           FTIRGDG+ WFILRSINNCGNDCCL+T+ AKYSIALQFLSLEEISEDSRE+
Sbjct: 236 FTIRGDGTRWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 286

[Close]

BLAST of Tan0013026 vs. TAIR 10
Match: AT3G23255.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. )

HSP 1 Score: 251.5 bits (641), Expect = 6.5e-67
Identity = 130/237 (54.85%), Postives = 169/237 (71.31%), Query Frame = 0


Query: 1   MMERFFSVRQIHTHCGSSH---SIMLVSGPPSCGKTSLLFQFAFNLGLEGNVT---FICN 60
           M+ERFF  ++  +    +H   ++ L+SGP S GKTSLLFQ A N+      T   FIC+
Sbjct: 1   MVERFFPTKR--SSGDENHRRGNLSLLSGPISSGKTSLLFQLALNVASASTTTRVVFICH 60

Query: 61  RRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRT--FPVAVVIDDF 120
           R+K+E+ PP+LSQG+DP+S+ F RIQ+KY++DDEGI+KYF+AFHLH     P AV+IDDF
Sbjct: 61  RKKIESNPPFLSQGIDPSSDVFNRIQIKYVDDDEGIRKYFAAFHLHHVDDLPSAVIIDDF 120

Query: 121 GDFFEERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRPCQLVLSDTHHGESPRLIF 180
           GD+F +        N R RD+AMVRTLALCHNA+  AN+   C+LVLS+T+HG+SPR +F
Sbjct: 121 GDYFSK---LNSVMNSRARDMAMVRTLALCHNAIVDANRKALCELVLSETNHGDSPRSLF 180

Query: 181 IYKRWVPTIFTIRGDGSGWFILRSINNCGNDCCLKTRSAKYSIALQFLSLEEISEDS 230
           IYKRW+P IFTI+G G G F+L S     ND     RSAKYSIALQ+L LE+I +DS
Sbjct: 181 IYKRWIPKIFTIKGHGDGSFLLTS-----ND--TSERSAKYSIALQYLILEQIIDDS 225

[Close]

BLAST of Tan0013026 vs. TAIR 10
Match: AT3G23255.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 52 Blast hits to 52 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 245.7 bits (626), Expect = 3.6e-65
Identity = 129/237 (54.43%), Postives = 169/237 (71.31%), Query Frame = 0


Query: 1   MMERFFSVRQIHTHCGSSH---SIMLVSGPPSCGKTSLLFQFAFNLGLEGNVT---FICN 60
           M+ERFF  ++  +    +H   ++ L+SGP S GKTSLLFQ A N+      T   FIC+
Sbjct: 1   MVERFFPTKR--SSGDENHRRGNLSLLSGPISSGKTSLLFQLALNVASASTTTRVVFICH 60

Query: 61  RRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRT--FPVAVVIDDF 120
           R+K+E+ PP+LSQG+DP+S+ F RIQ+KY++DDEGI+KYF+AFHLH     P AV+IDDF
Sbjct: 61  RKKIESNPPFLSQGIDPSSDVFNRIQIKYVDDDEGIRKYFAAFHLHHVDDLPSAVIIDDF 120

Query: 121 GDFFEERRCQEKYANPRGRDLAMVRTLALCHNAVSLANQSRPCQLVLSDTHHGESPRLIF 180
           GD+F +        N R RD+AMVRTLALCHNA+  A ++  C+LVLS+T+HG+SPR +F
Sbjct: 121 GDYFSK---LNSVMNSRARDMAMVRTLALCHNAIVDAKKAL-CELVLSETNHGDSPRSLF 180

Query: 181 IYKRWVPTIFTIRGDGSGWFILRSINNCGNDCCLKTRSAKYSIALQFLSLEEISEDS 230
           IYKRW+P IFTI+G G G F+L S     ND     RSAKYSIALQ+L LE+I +DS
Sbjct: 181 IYKRWIPKIFTIKGHGDGSFLLTS-----ND--TSERSAKYSIALQYLILEQIIDDS 224

The following BLAST results are available for this feature:

BLAST of Tan0013026 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0013026 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906786.1	2.2e-125	93.94	uncharacterized protein LOC120092706 isoform X1 [Benincasa hispida]	[more]
XP_011656789.1	2.9e-125	93.94	uncharacterized protein LOC101205665 [Cucumis sativus] >KAE8646754.1 hypothetica...	[more]
XP_008459907.1	1.9e-124	92.64	PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >XP_008459908.1 P...	[more]
XP_022959968.1	9.2e-124	93.86	uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_0229599...	[more]
KAA0039853.1	1.6e-123	92.21	uncharacterized protein E6C27_scaffold122G001280 [Cucumis melo var. makuwa]	[more]

BLAST of Tan0013026 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9H1	1.4e-125	93.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091880 PE=4 SV=1	[more]
A0A1S3CAT0	9.0e-125	92.64	uncharacterized protein LOC103498887 OS=Cucumis melo OX=3656 GN=LOC103498887 PE=...	[more]
E5GB61	9.0e-125	92.64	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A6J1H6C8	4.5e-124	93.86	uncharacterized protein LOC111460863 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7T9Y8	7.6e-124	92.21	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Tan0013026 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23255.2	6.5e-67	54.85	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G23255.1	3.6e-65	54.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 15..191 e-value: 9.8E-7 score: 30.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 19..165
None	No IPR available	PANTHER	PTHR28653	FAMILY NOT NAMED	coord: 1..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013026.1	Tan0013026.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000911	cytokinesis by cell plate formation