Tan0012755 (gene) Snake gourd v1

Overview


Name	Tan0012755
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	60S ribosomal protein L27a, putative
Location	LG02: 90622083 .. 90622841 (-)
RNA-Seq Expression	Tan0012755
Synteny	Tan0012755

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGGGACTTGTTTGATAATTTTTCAAAATACTGGGCCTGGATGCGAAATTATCTGTCCTAATGCCCCCACAGTAGCTGGAAACTCCCGTCGATCTCGACCGCATACAAAACCCTACCAAATTGTATCTTCTCTCTGCCGCCAAAAAACCCTAGGACTACGAGGGAGATCGAAATATGACGACCCGATTCAAGAAGAACCGGAAGAAGAGAGGGCACGTGAGCGCCGGTCATGGTCGTATCGGCAAGCACCGGAAGCACCCTGGTGGTCGGGGAAATGCCGGTGGTATGCATCACCACCGCATCCTCTTCGACAAGTACCATCCTGGATATTTCGGTAAAGTTGGTATGCGCTATTTCCACAAGCTCCGTAACAAGTTCTACTGCCCCATTGTCAACATCGACAAGCTCTGGTCCTTGGTTCCTCAGGACGTCAAGGACAAGGCCTCCAAGGACAACGCCCCCTTGCTCGATGTCACTCAATTTGGGTACTTCAAGGTATTGGGCAAGGGTGTTTTGCCGGAGAACCAGCCTATTGTGGTGAAGGCTAAGCTTGTTTCCAAGATCGCCGAGAAGAAGATCAAGGAGGCCGGTGGCGCGGTTGTACTCACTGCTTAGATTGGGTATTTTTCATTTTCTTTTTGTTCAAACTTGCAGTAGAGGTTAGAGACTGGTGCTGTTGTGTAATTCGGCTCTCGATTTGTTTGAACTTGTTGACAATAGTTCTGATATAATCAAGATTTTGATTCCTGTTTACTCCA

mRNA sequence

TGGGGGACTTGTTTGATAATTTTTCAAAATACTGGGCCTGGATGCGAAATTATCTGTCCTAATGCCCCCACAGTAGCTGGAAACTCCCGTCGATCTCGACCGCATACAAAACCCTACCAAATTGTATCTTCTCTCTGCCGCCAAAAAACCCTAGGACTACGAGGGAGATCGAAATATGACGACCCGATTCAAGAAGAACCGGAAGAAGAGAGGGCACGTGAGCGCCGGTCATGGTCGTATCGGCAAGCACCGGAAGCACCCTGGTGGTCGGGGAAATGCCGGTGGTATGCATCACCACCGCATCCTCTTCGACAAGTACCATCCTGGATATTTCGGTAAAGTTGGTATGCGCTATTTCCACAAGCTCCGTAACAAGTTCTACTGCCCCATTGTCAACATCGACAAGCTCTGGTCCTTGGTTCCTCAGGACGTCAAGGACAAGGCCTCCAAGGACAACGCCCCCTTGCTCGATGTCACTCAATTTGGGTACTTCAAGGTATTGGGCAAGGGTGTTTTGCCGGAGAACCAGCCTATTGTGGTGAAGGCTAAGCTTGTTTCCAAGATCGCCGAGAAGAAGATCAAGGAGGCCGGTGGCGCGGTTGTACTCACTGCTTAGATTGGGTATTTTTCATTTTCTTTTTGTTCAAACTTGCAGTAGAGGTTAGAGACTGGTGCTGTTGTGTAATTCGGCTCTCGATTTGTTTGAACTTGTTGACAATAGTTCTGATATAATCAAGATTTTGATTCCTGTTTACTCCA

Coding sequence (CDS)

ATGACGACCCGATTCAAGAAGAACCGGAAGAAGAGAGGGCACGTGAGCGCCGGTCATGGTCGTATCGGCAAGCACCGGAAGCACCCTGGTGGTCGGGGAAATGCCGGTGGTATGCATCACCACCGCATCCTCTTCGACAAGTACCATCCTGGATATTTCGGTAAAGTTGGTATGCGCTATTTCCACAAGCTCCGTAACAAGTTCTACTGCCCCATTGTCAACATCGACAAGCTCTGGTCCTTGGTTCCTCAGGACGTCAAGGACAAGGCCTCCAAGGACAACGCCCCCTTGCTCGATGTCACTCAATTTGGGTACTTCAAGGTATTGGGCAAGGGTGTTTTGCCGGAGAACCAGCCTATTGTGGTGAAGGCTAAGCTTGTTTCCAAGATCGCCGAGAAGAAGATCAAGGAGGCCGGTGGCGCGGTTGTACTCACTGCTTAG

Protein sequence

MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPIVVKAKLVSKIAEKKIKEAGGAVVLTA

Homology

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BLAST of Tan0012755 vs. ExPASy Swiss-Prot
Match: P49637 (60S ribosomal protein L27a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27AC PE=2 SV=2)

HSP 1 Score: 273.5 bits (698), Expect = 1.4e-72
Identity = 131/146 (89.73%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKF+CPIVN+DKLWSLVP+DVK K++KDN PL+DVTQ G+FKVLGKG LPEN+P 
Sbjct: 61  FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 147
           VVKAKL+SK AEKKIKEAGGAVVLTA
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA 146

[Close]

BLAST of Tan0012755 vs. ExPASy Swiss-Prot
Match: Q9LR33 (60S ribosomal protein L27a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27AB PE=2 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 5.9e-71
Identity = 129/146 (88.36%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           M T  KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKF+CPIVN+DKLWSLVP+DVK K+SKDN PL+DVTQ G+FKVLGKG LPEN+P 
Sbjct: 61  FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 147
           VVKAKL+SK AEKKIKEAGGAVVLTA
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA 146

[Close]

BLAST of Tan0012755 vs. ExPASy Swiss-Prot
Match: P48160 (60S ribosomal protein L27a OS=Dictyostelium discoideum OX=44689 GN=rpl27a PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.4e-50
Identity = 96/149 (64.43%), Postives = 121/149 (81.21%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           M TRF K+RK RG V AG+GR+GKHRKHPGGRGNAGG+ HHRI FDKYHPGYFGK+GMR+
Sbjct: 1   MPTRFSKHRKSRGDVCAGYGRVGKHRKHPGGRGNAGGLTHHRINFDKYHPGYFGKLGMRH 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDN---APLLDVTQFGYFKVLGKGVLPEN 120
           FH LRN+++CP V+++K+W+LVP+ V+   +  N   AP++DVTQ G+FKVLG G+LP  
Sbjct: 61  FHLLRNQYHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFFKVLGHGILP-T 120

Query: 121 QPIVVKAKLVSKIAEKKIKEAGGAVVLTA 147
           QPI+VKA+  SK+AEKKIK  GGA +L A
Sbjct: 121 QPIIVKARYFSKVAEKKIKAVGGACILVA 148

[Close]

BLAST of Tan0012755 vs. ExPASy Swiss-Prot
Match: Q56K03 (60S ribosomal protein L27a OS=Bos taurus OX=9913 GN=RPL27A PE=2 SV=3)

HSP 1 Score: 198.0 bits (502), Expect = 7.5e-50
Identity = 98/149 (65.77%), Postives = 119/149 (79.87%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           M +R +K RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYHPGYFGKVGMR+
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRH 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDN---APLLDVTQFGYFKVLGKGVLPEN 120
           +H  RN+ +CP VN+DKLW+LV +  +  A+K+    AP++DV + GY+KVLGKG LP+ 
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK- 120

Query: 121 QPIVVKAKLVSKIAEKKIKEAGGAVVLTA 147
           QP++VKAK  S+ AE+KIK  GGA VL A
Sbjct: 121 QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148

[Close]

BLAST of Tan0012755 vs. ExPASy Swiss-Prot
Match: P14115 (60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5)

HSP 1 Score: 198.0 bits (502), Expect = 7.5e-50
Identity = 98/149 (65.77%), Postives = 119/149 (79.87%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           M +R +K RK RGHVS GHGRIGKHRKHPGGRGNAGGMHHHRI FDKYHPGYFGKVGMR+
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRH 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDN---APLLDVTQFGYFKVLGKGVLPEN 120
           +H  RN+ +CP VN+DKLW+LV +  +  A+K+    AP++DV + GY+KVLGKG LP+ 
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGVAPIIDVVRSGYYKVLGKGKLPK- 120

Query: 121 QPIVVKAKLVSKIAEKKIKEAGGAVVLTA 147
           QP++VKAK  S+ AE+KIK  GGA VL A
Sbjct: 121 QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148

[Close]

BLAST of Tan0012755 vs. NCBI nr
Match: XP_010102488.1 (60S ribosomal protein L27a-3 [Morus notabilis] >XP_010113107.1 60S ribosomal protein L27a-3 [Morus notabilis] >EXB93552.1 hypothetical protein L484_014543 [Morus notabilis] >EXC65297.1 hypothetical protein L484_000089 [Morus notabilis])

HSP 1 Score: 293.5 bits (750), Expect = 1.0e-75
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKFYCPIVNIDKLWS+VPQDVKDKASKDN PL+DVTQFGYFKVLGKGVLPENQP+
Sbjct: 61  FHKLRNKFYCPIVNIDKLWSMVPQDVKDKASKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 147
           VVKAKLVSKIAEKKIKEAGGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 146

[Close]

BLAST of Tan0012755 vs. NCBI nr
Match: XP_042984001.1 (60S ribosomal protein L27a-3-like [Carya illinoinensis] >KAG2701928.1 hypothetical protein I3760_06G067600 [Carya illinoinensis] >KAG6708186.1 hypothetical protein I3842_06G068200 [Carya illinoinensis] >KAG7974739.1 hypothetical protein I3843_06G063100 [Carya illinoinensis])

HSP 1 Score: 292.0 bits (746), Expect = 2.9e-75
Identity = 140/146 (95.89%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKFYCPIVN+DKLWSL+P+DVKDKASKDNAPL+DVTQFG+FKVLGKGVLPENQP+
Sbjct: 61  FHKLRNKFYCPIVNVDKLWSLIPKDVKDKASKDNAPLIDVTQFGFFKVLGKGVLPENQPV 120

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 147
           VVKAKLVSKIAEKKIKEAGGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 146

[Close]

BLAST of Tan0012755 vs. NCBI nr
Match: XP_002527925.1 (60S ribosomal protein L27a-3 [Ricinus communis] >EEF34482.1 60S ribosomal protein L27a, putative [Ricinus communis])

HSP 1 Score: 292.0 bits (746), Expect = 2.9e-75
Identity = 141/146 (96.58%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKFYCPIVNIDKLWS++P+DVKDKA+KDN PLLDVTQFGYFKVLGKGVLPENQPI
Sbjct: 61  FHKLRNKFYCPIVNIDKLWSMIPEDVKDKANKDNVPLLDVTQFGYFKVLGKGVLPENQPI 120

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 147
           VVKAKLVSKIAEKKIKEAGGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 146

[Close]

BLAST of Tan0012755 vs. NCBI nr
Match: XP_012079990.1 (60S ribosomal protein L27a-3 [Jatropha curcas] >KDP31039.1 hypothetical protein JCGZ_11415 [Jatropha curcas])

HSP 1 Score: 291.6 bits (745), Expect = 3.8e-75
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKFYCPIVNIDKLWSL+PQ+VKDKASKDNAPL+DVTQFGYFKVLGKGVLPENQPI
Sbjct: 61  FHKLRNKFYCPIVNIDKLWSLIPQEVKDKASKDNAPLVDVTQFGYFKVLGKGVLPENQPI 120

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 147
           VVKAKLVSKIAEKKIKE GGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKENGGAVVLTA 146

[Close]

BLAST of Tan0012755 vs. NCBI nr
Match: PON96718.1 (Ribosomal protein [Trema orientale])

HSP 1 Score: 291.2 bits (744), Expect = 5.0e-75
Identity = 141/146 (96.58%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           MTTRFKK+RKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKHRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKFYCPIVNIDKLWSLVPQ+VKDKA+KDNAPL+DVTQFGYFKVLGKGVLPENQP+
Sbjct: 61  FHKLRNKFYCPIVNIDKLWSLVPQEVKDKATKDNAPLIDVTQFGYFKVLGKGVLPENQPV 120

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 147
           VVKAKLVSKIAEKKIKEAGGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 146

[Close]

BLAST of Tan0012755 vs. ExPASy TrEMBL
Match: W9RTX6 (Ribosomal_L18e/L15P domain-containing protein OS=Morus notabilis OX=981085 GN=L484_000089 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 4.9e-76
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKFYCPIVNIDKLWS+VPQDVKDKASKDN PL+DVTQFGYFKVLGKGVLPENQP+
Sbjct: 61  FHKLRNKFYCPIVNIDKLWSMVPQDVKDKASKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 147
           VVKAKLVSKIAEKKIKEAGGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 146

[Close]

BLAST of Tan0012755 vs. ExPASy TrEMBL
Match: B9SPK6 (60S ribosomal protein L27a, putative OS=Ricinus communis OX=3988 GN=RCOM_0024830 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75
Identity = 141/146 (96.58%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKFYCPIVNIDKLWS++P+DVKDKA+KDN PLLDVTQFGYFKVLGKGVLPENQPI
Sbjct: 61  FHKLRNKFYCPIVNIDKLWSMIPEDVKDKANKDNVPLLDVTQFGYFKVLGKGVLPENQPI 120

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 147
           VVKAKLVSKIAEKKIKEAGGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 146

[Close]

BLAST of Tan0012755 vs. ExPASy TrEMBL
Match: A0A067KGS0 (Ribosomal_L18e/L15P domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_11415 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 1.8e-75
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKFYCPIVNIDKLWSL+PQ+VKDKASKDNAPL+DVTQFGYFKVLGKGVLPENQPI
Sbjct: 61  FHKLRNKFYCPIVNIDKLWSLIPQEVKDKASKDNAPLVDVTQFGYFKVLGKGVLPENQPI 120

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 147
           VVKAKLVSKIAEKKIKE GGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKENGGAVVLTA 146

[Close]

BLAST of Tan0012755 vs. ExPASy TrEMBL
Match: A0A6J1J3M5 (60S ribosomal protein L27a-3 OS=Cucurbita maxima OX=3661 GN=LOC111483090 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75
Identity = 140/146 (95.89%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKFYCPIVN+DK+WSL+PQ+VKDKASKDN PL+DVTQFGYFKVLGKGVLPENQPI
Sbjct: 61  FHKLRNKFYCPIVNVDKIWSLIPQEVKDKASKDNVPLVDVTQFGYFKVLGKGVLPENQPI 120

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 147
           VVKAKLVSKIAEKKIKEAGGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 146

[Close]

BLAST of Tan0012755 vs. ExPASy TrEMBL
Match: A0A6J1GZL8 (60S ribosomal protein L27a-3 OS=Cucurbita moschata OX=3662 GN=LOC111458930 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75
Identity = 140/146 (95.89%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKFYCPIVN+DK+WSL+PQ+VKDKASKDN PL+DVTQFGYFKVLGKGVLPENQPI
Sbjct: 61  FHKLRNKFYCPIVNVDKIWSLIPQEVKDKASKDNVPLVDVTQFGYFKVLGKGVLPENQPI 120

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 147
           VVKAKLVSKIAEKKIKEAGGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 146

[Close]

BLAST of Tan0012755 vs. TAIR 10
Match: AT1G70600.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 273.5 bits (698), Expect = 1.0e-73
Identity = 131/146 (89.73%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKF+CPIVN+DKLWSLVP+DVK K++KDN PL+DVTQ G+FKVLGKG LPEN+P 
Sbjct: 61  FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 147
           VVKAKL+SK AEKKIKEAGGAVVLTA
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA 146

[Close]

BLAST of Tan0012755 vs. TAIR 10
Match: AT1G23290.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 268.1 bits (684), Expect = 4.2e-72
Identity = 129/146 (88.36%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           M T  KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1   MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKF+CPIVN+DKLWSLVP+DVK K+SKDN PL+DVTQ G+FKVLGKG LPEN+P 
Sbjct: 61  FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 147
           VVKAKL+SK AEKKIKEAGGAVVLTA
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA 146

[Close]

BLAST of Tan0012755 vs. TAIR 10
Match: AT1G12960.1 (Ribosomal protein L18e/L15 superfamily protein )

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-30
Identity = 80/145 (55.17%), Postives = 84/145 (57.93%), Query Frame = 0


Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
           MTT  KK R  R HVS GHGR GKHRK PG RGNAG                   VGMRY
Sbjct: 1   MTTSRKKTRNLREHVSVGHGRFGKHRKLPGSRGNAG-------------------VGMRY 60

Query: 61  FHKLRNKFYCPIVNIDKLWSLVPQDVKDKASKDNAPLLDVTQFGYFKVLGKGVLPENQPI 120
           FHKLRNKFYC IVN+DKLWS+                          VLGKG LPEN+P+
Sbjct: 61  FHKLRNKFYCQIVNLDKLWSM--------------------------VLGKGFLPENKPV 100

Query: 121 VVKAKLVSKIAEKKIKEAGGAVVLT 146
           VVKAKLVS   EKKIKEAG AVVLT
Sbjct: 121 VVKAKLVSNTDEKKIKEAGSAVVLT 100

The following BLAST results are available for this feature:

BLAST of Tan0012755 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49637	1.4e-72	89.73	60S ribosomal protein L27a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27AC PE=2 SV=...	[more]
Q9LR33	5.9e-71	88.36	60S ribosomal protein L27a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27AB PE=2 SV=...	[more]
P48160	3.4e-50	64.43	60S ribosomal protein L27a OS=Dictyostelium discoideum OX=44689 GN=rpl27a PE=3 S...	[more]
Q56K03	7.5e-50	65.77	60S ribosomal protein L27a OS=Bos taurus OX=9913 GN=RPL27A PE=2 SV=3	[more]
P14115	7.5e-50	65.77	60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5	[more]

BLAST of Tan0012755 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_010102488.1	1.0e-75	97.26	60S ribosomal protein L27a-3 [Morus notabilis] >XP_010113107.1 60S ribosomal pro...	[more]
XP_042984001.1	2.9e-75	95.89	60S ribosomal protein L27a-3-like [Carya illinoinensis] >KAG2701928.1 hypothetic...	[more]
XP_002527925.1	2.9e-75	96.58	60S ribosomal protein L27a-3 [Ricinus communis] >EEF34482.1 60S ribosomal protei...	[more]
XP_012079990.1	3.8e-75	97.26	60S ribosomal protein L27a-3 [Jatropha curcas] >KDP31039.1 hypothetical protein ...	[more]
PON96718.1	5.0e-75	96.58	Ribosomal protein [Trema orientale]	[more]

BLAST of Tan0012755 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
W9RTX6	4.9e-76	97.26	Ribosomal_L18e/L15P domain-containing protein OS=Morus notabilis OX=981085 GN=L4...	[more]
B9SPK6	1.4e-75	96.58	60S ribosomal protein L27a, putative OS=Ricinus communis OX=3988 GN=RCOM_0024830...	[more]
A0A067KGS0	1.8e-75	97.26	Ribosomal_L18e/L15P domain-containing protein OS=Jatropha curcas OX=180498 GN=JC...	[more]
A0A6J1J3M5	2.4e-75	95.89	60S ribosomal protein L27a-3 OS=Cucurbita maxima OX=3661 GN=LOC111483090 PE=3 SV...	[more]
A0A6J1GZL8	2.4e-75	95.89	60S ribosomal protein L27a-3 OS=Cucurbita moschata OX=3662 GN=LOC111458930 PE=3 ...	[more]

BLAST of Tan0012755 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70600.1	1.0e-73	89.73	Ribosomal protein L18e/L15 superfamily protein	[more]
AT1G23290.1	4.2e-72	88.36	Ribosomal protein L18e/L15 superfamily protein	[more]
AT1G12960.1	1.0e-30	55.17	Ribosomal protein L18e/L15 superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.100.10.10		coord: 58..146 e-value: 4.7E-40 score: 137.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR11721	60S RIBOSOMAL PROTEIN L27A	coord: 1..146
None	No IPR available	PANTHER	PTHR11721:SF21	60S RIBOSOMAL PROTEIN L27A-3	coord: 1..146
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF00828	Ribosomal_L27A	coord: 28..143 e-value: 1.7E-19 score: 70.7
IPR001196	Ribosomal protein L15, conserved site	PROSITE	PS00475	RIBOSOMAL_L15	coord: 107..139
IPR030878	Ribosomal protein L15	HAMAP	MF_01341	Ribosomal_L15	coord: 1..145 score: 12.102771
IPR036227	Ribosomal L18e/L15P superfamily	SUPERFAMILY	52080	Ribosomal proteins L15p and L18e	coord: 6..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0012755.1	Tan0012755.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome