Tan0012291 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCCAATTTCATCCATGGCATTCGATACCTGGTTCCCTTGCAAGTTCTTTACTCTCAATCCACTTCTCTAACCCTGATAACTCTGGCCATTAAACTTTCTGTGGATTTCAACACCTCCATGCCTGGCAGAGAAGATCAGCTTGCAGAACTGAGCAGTGCTGTGTTCATGTGCACTATGGATAATTGTATGTCTTCTCTTGGAACTACGGAGAATCAAGAAATCTTTATGGACCTTATGGCTCTGGGAATTCTTCTTAATTGTTATTACCCTCATAGTTAACATCTGTATTGAGTTGGCTACTAATCTATGTTTTCACAAAGGAGCACATTTTCATCATGATCTCGATGCTGGTTTGACTGTTCCATCTACTAAAAGCTACCTCAAAATGGGGTACAATCTAACACAGGAACTAGCTACGAGAGAGTCTACAGAAAATGGAAAAGCAGGCAAAGCAGCAATTGAAAACCTCAAAGAGGCAATGATGAAACATTGGATGATGGCTTATACCTGCAGCCCCCAGTCTGTGATAGGTGAGTCCATCAAATGTACTGCTTCTGGGGCAAATCTGTCTTCTTAG ATGGCTGCCAATTTCATCCATGGCATTCGATACCTGGTTCCCTTGCAAGTTCTTTACTCTCAATCCACTTCTCTAACCCTGATAACTCTGGCCATTAAACTTTCTGTGGATTTCAACACCTCCATGCCTGGCAGAGAAGATCAGCTTGCAGAACTGAGCAGTGCTGTGTTCATGTGCACTATGGATAATTTTAACATCTGTATTGAGTTGGCTACTAATCTATGTTTTCACAAAGGAGCACATTTTCATCATGATCTCGATGCTGGTTTGACTGTTCCATCTACTAAAAGCTACCTCAAAATGGGGTACAATCTAACACAGGAACTAGCTACGAGAGAGTCTACAGAAAATGGAAAAGCAGGCAAAGCAGCAATTGAAAACCTCAAAGAGGCAATGATGAAACATTGGATGATGGCTTATACCTGCAGCCCCCAGTCTGTGATAGGTGAGTCCATCAAATGTACTGCTTCTGGGGCAAATCTGTCTTCTTAG ATGGCTGCCAATTTCATCCATGGCATTCGATACCTGGTTCCCTTGCAAGTTCTTTACTCTCAATCCACTTCTCTAACCCTGATAACTCTGGCCATTAAACTTTCTGTGGATTTCAACACCTCCATGCCTGGCAGAGAAGATCAGCTTGCAGAACTGAGCAGTGCTGTGTTCATGTGCACTATGGATAATTTTAACATCTGTATTGAGTTGGCTACTAATCTATGTTTTCACAAAGGAGCACATTTTCATCATGATCTCGATGCTGGTTTGACTGTTCCATCTACTAAAAGCTACCTCAAAATGGGGTACAATCTAACACAGGAACTAGCTACGAGAGAGTCTACAGAAAATGGAAAAGCAGGCAAAGCAGCAATTGAAAACCTCAAAGAGGCAATGATGAAACATTGGATGATGGCTTATACCTGCAGCCCCCAGTCTGTGATAGGTGAGTCCATCAAATGTACTGCTTCTGGGGCAAATCTGTCTTCTTAG MAANFIHGIRYLVPLQVLYSQSTSLTLITLAIKLSVDFNTSMPGREDQLAELSSAVFMCTMDNFNICIELATNLCFHKGAHFHHDLDAGLTVPSTKSYLKMGYNLTQELATRESTENGKAGKAAIENLKEAMMKHWMMAYTCSPQSVIGESIKCTASGANLSS Homology
BLAST of Tan0012291 vs. NCBI nr
Match: XP_022154499.1 (uncharacterized protein LOC111021764 [Momordica charantia]) HSP 1 Score: 160.2 bits (404), Expect = 1.5e-35 Identity = 102/202 (50.50%), Postives = 120/202 (59.41%), Query Frame = 0
BLAST of Tan0012291 vs. NCBI nr
Match: XP_022924953.1 (uncharacterized protein LOC111432343 [Cucurbita moschata]) HSP 1 Score: 146.4 bits (368), Expect = 2.2e-31 Identity = 92/205 (44.88%), Postives = 115/205 (56.10%), Query Frame = 0
BLAST of Tan0012291 vs. NCBI nr
Match: XP_022966654.1 (uncharacterized protein LOC111466274 [Cucurbita maxima]) HSP 1 Score: 146.4 bits (368), Expect = 2.2e-31 Identity = 92/205 (44.88%), Postives = 115/205 (56.10%), Query Frame = 0
BLAST of Tan0012291 vs. NCBI nr
Match: XP_038882540.1 (uncharacterized protein LOC120073776 isoform X2 [Benincasa hispida]) HSP 1 Score: 145.6 bits (366), Expect = 3.8e-31 Identity = 91/174 (52.30%), Postives = 109/174 (62.64%), Query Frame = 0
BLAST of Tan0012291 vs. NCBI nr
Match: KAG6595440.1 (hypothetical protein SDJN03_11993, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145.2 bits (365), Expect = 4.9e-31 Identity = 91/205 (44.39%), Postives = 115/205 (56.10%), Query Frame = 0
BLAST of Tan0012291 vs. ExPASy TrEMBL
Match: A0A6J1DMA6 (uncharacterized protein LOC111021764 OS=Momordica charantia OX=3673 GN=LOC111021764 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 7.2e-36 Identity = 102/202 (50.50%), Postives = 120/202 (59.41%), Query Frame = 0
BLAST of Tan0012291 vs. ExPASy TrEMBL
Match: A0A6J1HUF0 (uncharacterized protein LOC111466274 OS=Cucurbita maxima OX=3661 GN=LOC111466274 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31 Identity = 92/205 (44.88%), Postives = 115/205 (56.10%), Query Frame = 0
BLAST of Tan0012291 vs. ExPASy TrEMBL
Match: A0A6J1EDX2 (uncharacterized protein LOC111432343 OS=Cucurbita moschata OX=3662 GN=LOC111432343 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31 Identity = 92/205 (44.88%), Postives = 115/205 (56.10%), Query Frame = 0
BLAST of Tan0012291 vs. ExPASy TrEMBL
Match: A0A6J1DKG6 (uncharacterized protein LOC111021763 OS=Momordica charantia OX=3673 GN=LOC111021763 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 9.1e-31 Identity = 93/202 (46.04%), Postives = 115/202 (56.93%), Query Frame = 0
BLAST of Tan0012291 vs. ExPASy TrEMBL
Match: A0A5A7SMA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G00540 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 7.2e-28 Identity = 90/202 (44.55%), Postives = 111/202 (54.95%), Query Frame = 0
BLAST of Tan0012291 vs. TAIR 10
Match: AT5G47580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 99.0 bits (245), Expect = 3.8e-21 Identity = 77/203 (37.93%), Postives = 101/203 (49.75%), Query Frame = 0
BLAST of Tan0012291 vs. TAIR 10
Match: AT4G17250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47580.1); Has 31 Blast hits to 31 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 96.3 bits (238), Expect = 2.4e-20 Identity = 66/201 (32.84%), Postives = 100/201 (49.75%), Query Frame = 0
BLAST of Tan0012291 vs. TAIR 10
Match: AT4G17250.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: heat acclimation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47580.1). ) HSP 1 Score: 96.3 bits (238), Expect = 2.4e-20 Identity = 66/201 (32.84%), Postives = 100/201 (49.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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