Tan0012186 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAACAAGTGTATTTTCATTAGGTTTGGCAGTGTATGGGAGGAGGATACATGTACTTATACCGGAGGTCATATGACTGGTATTGTTGTGCCATTAACGATAACATTCGAGAAATTTCGGTCGGAGGTTTATAATGTTACATCGATCGGCGAGTATGCTTATGACATTGAAATGAGGGTGAAACTCAATACAGACTATCAATCACCGCCAATGTACATAAGTAACAATCGAGATGTTATATTTTTTATGAATCATTCGGGCGTTGCAAGAGTCCAAGTCTGGATAACAACTGTACAGAAACAACTCATCGCAAACGGTGTAGAAGCTGATGAAGATAGAGATAAGGACCCGGAGTACAACCCTTTGCACGAAGAAGAAAGTGATGAGGTTGCAGAATACGAAGAAGATGAAGAGGAATACGACGATGAAGAGGAATATGAAGATATAGTATACAACGACGAGTACGAGTCAGTGGTATCAAACGAATCTGAAGTCGAAGAAGAAGGTAGAGACGATGGGTACGTTCCAAATGATGGGTTTCATTTTGATAACGTATAG ATGGACAACAAGTGTATTTTCATTAGGTTTGGCAGTGTATGGGAGGAGGATACATGTACTTATACCGGAGGTCATATGACTGGTATTGTTGTGCCATTAACGATAACATTCGAGAAATTTCGGTCGGAGGTTTATAATGTTACATCGATCGGCGAGTATGCTTATGACATTGAAATGAGGGTGAAACTCAATACAGACTATCAATCACCGCCAATGTACATAAGTAACAATCGAGATGTTATATTTTTTATGAATCATTCGGGCGTTGCAAGAGTCCAAGTCTGGATAACAACTGTACAGAAACAACTCATCGCAAACGGTGTAGAAGCTGATGAAGATAGAGATAAGGACCCGGAGTACAACCCTTTGCACGAAGAAGAAAGTGATGAGGTTGCAGAATACGAAGAAGATGAAGAGGAATACGACGATGAAGAGGAATATGAAGATATAGTATACAACGACGAGTACGAGTCAGTGGTATCAAACGAATCTGAAGTCGAAGAAGAAGGTAGAGACGATGGGTACGTTCCAAATGATGGGTTTCATTTTGATAACGTATAG ATGGACAACAAGTGTATTTTCATTAGGTTTGGCAGTGTATGGGAGGAGGATACATGTACTTATACCGGAGGTCATATGACTGGTATTGTTGTGCCATTAACGATAACATTCGAGAAATTTCGGTCGGAGGTTTATAATGTTACATCGATCGGCGAGTATGCTTATGACATTGAAATGAGGGTGAAACTCAATACAGACTATCAATCACCGCCAATGTACATAAGTAACAATCGAGATGTTATATTTTTTATGAATCATTCGGGCGTTGCAAGAGTCCAAGTCTGGATAACAACTGTACAGAAACAACTCATCGCAAACGGTGTAGAAGCTGATGAAGATAGAGATAAGGACCCGGAGTACAACCCTTTGCACGAAGAAGAAAGTGATGAGGTTGCAGAATACGAAGAAGATGAAGAGGAATACGACGATGAAGAGGAATATGAAGATATAGTATACAACGACGAGTACGAGTCAGTGGTATCAAACGAATCTGAAGTCGAAGAAGAAGGTAGAGACGATGGGTACGTTCCAAATGATGGGTTTCATTTTGATAACGTATAG MDNKCIFIRFGSVWEEDTCTYTGGHMTGIVVPLTITFEKFRSEVYNVTSIGEYAYDIEMRVKLNTDYQSPPMYISNNRDVIFFMNHSGVARVQVWITTVQKQLIANGVEADEDRDKDPEYNPLHEEESDEVAEYEEDEEEYDDEEEYEDIVYNDEYESVVSNESEVEEEGRDDGYVPNDGFHFDNV Homology
BLAST of Tan0012186 vs. NCBI nr
Match: XP_038888098.1 (uncharacterized protein LOC120078004 [Benincasa hispida]) HSP 1 Score: 99.0 bits (245), Expect = 4.6e-17 Identity = 47/134 (35.07%), Postives = 82/134 (61.19%), Query Frame = 0
BLAST of Tan0012186 vs. NCBI nr
Match: XP_022154925.1 (uncharacterized protein LOC111022071 [Momordica charantia]) HSP 1 Score: 75.5 bits (184), Expect = 5.5e-10 Identity = 47/168 (27.98%), Postives = 92/168 (54.76%), Query Frame = 0
BLAST of Tan0012186 vs. NCBI nr
Match: XP_038902319.1 (trichohyalin-like [Benincasa hispida]) HSP 1 Score: 73.2 bits (178), Expect = 2.7e-09 Identity = 28/74 (37.84%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of Tan0012186 vs. NCBI nr
Match: KAA0056639.1 (MuDRA-like transposase [Cucumis melo var. makuwa]) HSP 1 Score: 68.6 bits (166), Expect = 6.7e-08 Identity = 31/99 (31.31%), Postives = 57/99 (57.58%), Query Frame = 0
BLAST of Tan0012186 vs. NCBI nr
Match: TYK07864.1 (MuDRA-like transposase [Cucumis melo var. makuwa]) HSP 1 Score: 65.9 bits (159), Expect = 4.3e-07 Identity = 29/94 (30.85%), Postives = 56/94 (59.57%), Query Frame = 0
BLAST of Tan0012186 vs. ExPASy TrEMBL
Match: A0A6J1DL08 (uncharacterized protein LOC111022071 OS=Momordica charantia OX=3673 GN=LOC111022071 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 2.6e-10 Identity = 47/168 (27.98%), Postives = 92/168 (54.76%), Query Frame = 0
BLAST of Tan0012186 vs. ExPASy TrEMBL
Match: A0A5A7UT04 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001610 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.2e-08 Identity = 31/99 (31.31%), Postives = 57/99 (57.58%), Query Frame = 0
BLAST of Tan0012186 vs. ExPASy TrEMBL
Match: A0A5D3C9E9 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1933G00080 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.1e-07 Identity = 29/94 (30.85%), Postives = 56/94 (59.57%), Query Frame = 0
BLAST of Tan0012186 vs. ExPASy TrEMBL
Match: A0A5A7TQS3 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1770G00270 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.6e-07 Identity = 29/94 (30.85%), Postives = 56/94 (59.57%), Query Frame = 0
BLAST of Tan0012186 vs. ExPASy TrEMBL
Match: A0A5A7UB55 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001530 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 4.7e-07 Identity = 30/94 (31.91%), Postives = 55/94 (58.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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