Tan0011970 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTACTTGTGAAGCGCAGAACCCTAAAGCAGGGGCCCAAACCCTGTGTGTGTGTTTCGCTCTCTTGATCAAATCCGGCCGTGACCGGAGACTGCAGAAATGAAATCGGCGGCTTCACCTTCTTCAGTCGAAGCTTTGAGGAATGGAGGAGAAGGAATCGCCTCCGCCCTATCTTCTTCTGATCAGTCTCATCTGTTGCTTGCCACTAGACCTCCCAGGTACTTCCTTTTCTCTCTCTTCTCTTCCTTTATTGTCTTTGGATTCGCCTTCTCCTTCATACTGCTTCATCGGCTCCACCTTTTTGGGCCTTCAATCGCTCCCTTCTGCTCCTGCTGCTGTTTATTACCGATTTTTCCTTTGCCAGTGGGTTTTTTGTTTTTCCTTTTTTAATCGCTGCTGCCGGAATCACCAGTGGCTCAGTTTGTTGGCTGTTTTTGTTATTGATTTTGTACAATTGGAATATTGAGGGCACACTTCACATTTCTGACAACAGTGTGTCTTCTCTGAATTCTGTTCGATTACTCTTTTTCCCTTTTCTTTTTTAATGGCTCACTTCCATTTCCATTCTGATGATTCACTTTTTCTTAATTCTTTTGGATTGGAGCTAGCTTTCTTGTAGGTAGTTGATGCCTCCTTTTGTGGGCTTGTTTTTTATGCCCTTGTAATTCTTTCATTTTTTTTTTTGTTTCTTAAAACAAAATATTCACTTCCATTTTCATTGTATTGAGTATTATAAGGTGGTCGAGTCCTTTGTGCTATTATTTAGAACATGTTGTTAGAGAGGAATTTGAGAATCTCTATAGAAAGTTTGTGTTGAAGTACTGATATATGATTAAATTTACTCTAATCAATAACTTTAGCTTTTGAGTTATTGAGTTGAGTGGTGTTTTAGCATTGCATGGGAGAGTGTCATTTCCTCCAGAAAATATCATTTGATAATCTCTTGTTCGGTCTTGTGCCGATGTCCATGCCTAGTGAGGAGTTAAATATTGATATGTTTCATTTTGGATAAGCACAACTGAACATTAAAAAAAAAAAAGCTTCATTAAGGATCTTTCGCAGGGACTTTTGTTTTTTGGTAACCATCCTTTATTTTCAATTCTTTAACATCTATGATTGTTGTGTTTGTTTGTGGGCTATGGCTTTCATTTCTTTTAAGTTTTGGCTTTCAATTCTTCAACATCTATGATTGTTAAGATTAAAGATGTATTGAATTTCATTTCTTTTAAGTTTTGGGAACTTTTGTGATTGATAAAAAAGGAAGGATTGAGAGAATTTATATGCTAGATTGAATATCATTTCTTTTAAGTTTTGGGTGGGAACTTATGTGATTGTTTCTTTTCATCTGCACTGAATCTATAAAAATTCAGTCTTCCTCATTTGTTCTAATATGATTAATGTGACTGTTATTTAAGCAGGCAAGTAGTATCAATATTGACTTGTTCAAAGCTATGTGCTATTTGCTTTGTTGCCGGGGTGGTTGTTGGTTACTCGTTAAAGCGATGCGTCAATCGATGGGTTTCCAAGCTATTGAGGAGATTGAAAGATGATTGATATGTCCATCCCCTTGTTTTGGTATGCCAGTTTCATTGATTGTTATGGATAGAAATGAATTGCTTATTTGTTGCTCAATTAGGAAAGACGGCCCAATGTTTAGTTTGTATTTTTTTTCTTTTTTCTTTTGATATGAAAAAAGAAACATTGAGAGCCTTGGAAATATAAAGTTTGAAAACCAACCATTTTTTTCTTTATTTTTTTTCTAGCAGATTGATCAATTGCCATGAAAGTTGTCGCTTCAGCAGGAAAGTCACCAATGTCAAGCGCAATTTTGCATGTTATTTTTGTTTGTTTTAGGTTAAATTAATAGTTTAATCTTCAAAGTTCTAGGTTTATGTCTATCTGATCCTTGAACTTACAAAAATGTCTAATAGGCCCGTGAATTTTCAAATATTGGTTTCTGTTTGGTCCCTAGACTTAAAAAAGTGTGTAATATATCTTAAACTTTGAAATTTGTGTCCAATAAGTCTCTAAATTTTCATTTTTGTATCTAATAAGTCATTCATCCATTCAACATTCTAAAACATTCACGAAATTACTATACACAAAATTGAAAGTTCAGGGTTTTATTAGACATTTTATTCATTTATATATTTGATAGATCAATTAGTTTTTAAAAAATGTTGAAAATGTCAGAGACCTACTAGACACAAAATTGAAATTTCTTGGTCTATTAGATATTTAAAATTCAGGGACTTATTAGACACAAACCTAAAAGTTTAGGTACTAAAATTTTAATTTAACCTTTGTTTTATGATCTTTCTACTTTCTATCTTTTTTCCCCTCTTCTACAACGTAG CTTTACTTGTGAAGCGCAGAACCCTAAAGCAGGGGCCCAAACCCTGTGTGTGTGTTTCGCTCTCTTGATCAAATCCGGCCGTGACCGGAGACTGCAGAAATGAAATCGGCGGCTTCACCTTCTTCAGTCGAAGCTTTGAGGAATGGAGGAGAAGGAATCGCCTCCGCCCTATCTTCTTCTGATCAGTCTCATCTGTTGCTTGCCACTAGACCTCCCAGGCAAGTAGTATCAATATTGACTTGTTCAAAGCTATGTGCTATTTGCTTTGTTGCCGGGGTGGTTGTTGGTTACTCGTTAAAGCGATGCGTCAATCGATGGGTTTCCAAGCTATTGAGGAGATTGAAAGATGATTGATATGTCCATCCCCTTGTTTTGCAGATTGATCAATTGCCATGAAAGTTGTCGCTTCAGCAGGAAAGTCACCAATGTCAAGCGCAATTTTGCATGTTATTTTTGTTTGTTTTAGGTTAAATTAATAGTTTAATCTTCAAAGTTCTAGGTTTATGTCTATCTGATCCTTGAACTTACAAAAATGTCTAATAGGCCCGTGAATTTTCAAATATTGGTTTCTGTTTGGTCCCTAGACTTAAAAAAGTGTGTAATATATCTTAAACTTTGAAATTTGTGTCCAATAAGTCTCTAAATTTTCATTTTTGTATCTAATAAGTCATTCATCCATTCAACATTCTAAAACATTCACGAAATTACTATACACAAAATTGAAAGTTCAGGGTTTTATTAGACATTTTATTCATTTATATATTTGATAGATCAATTAGTTTTTAAAAAATGTTGAAAATGTCAGAGACCTACTAGACACAAAATTGAAATTTCTTGGTCTATTAGATATTTAAAATTCAGGGACTTATTAGACACAAACCTAAAAGTTTAGGTACTAAAATTTTAATTTAACCTTTGTTTTATGATCTTTCTACTTTCTATCTTTTTTCCCCTCTTCTACAACGTAG ATGAAATCGGCGGCTTCACCTTCTTCAGTCGAAGCTTTGAGGAATGGAGGAGAAGGAATCGCCTCCGCCCTATCTTCTTCTGATCAGTCTCATCTGTTGCTTGCCACTAGACCTCCCAGGCAAGTAGTATCAATATTGACTTGTTCAAAGCTATGTGCTATTTGCTTTGTTGCCGGGGTGGTTGTTGGTTACTCGTTAAAGCGATGCGTCAATCGATGGGTTTCCAAGCTATTGAGGAGATTGAAAGATGATTGA MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD Homology
BLAST of Tan0011970 vs. NCBI nr
Match: XP_038893067.1 (uncharacterized protein LOC120081950 [Benincasa hispida]) HSP 1 Score: 145.2 bits (365), Expect = 2.5e-31 Identity = 76/84 (90.48%), Postives = 77/84 (91.67%), Query Frame = 0
BLAST of Tan0011970 vs. NCBI nr
Match: XP_022974252.1 (uncharacterized protein LOC111472885 [Cucurbita maxima]) HSP 1 Score: 144.8 bits (364), Expect = 3.3e-31 Identity = 78/84 (92.86%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of Tan0011970 vs. NCBI nr
Match: XP_023540347.1 (uncharacterized protein LOC111800746 [Cucurbita pepo subsp. pepo] >KAG6597021.1 hypothetical protein SDJN03_10201, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028499.1 hypothetical protein SDJN02_09680 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 143.3 bits (360), Expect = 9.6e-31 Identity = 79/84 (94.05%), Postives = 79/84 (94.05%), Query Frame = 0
BLAST of Tan0011970 vs. NCBI nr
Match: XP_022956291.1 (uncharacterized protein LOC111458016 [Cucurbita moschata]) HSP 1 Score: 141.7 bits (356), Expect = 2.8e-30 Identity = 78/84 (92.86%), Postives = 79/84 (94.05%), Query Frame = 0
BLAST of Tan0011970 vs. NCBI nr
Match: KGN51411.1 (hypothetical protein Csa_007923 [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 3.4e-28 Identity = 70/83 (84.34%), Postives = 73/83 (87.95%), Query Frame = 0
BLAST of Tan0011970 vs. ExPASy TrEMBL
Match: A0A6J1I9S5 (uncharacterized protein LOC111472885 OS=Cucurbita maxima OX=3661 GN=LOC111472885 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.6e-31 Identity = 78/84 (92.86%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of Tan0011970 vs. ExPASy TrEMBL
Match: A0A6J1GW53 (uncharacterized protein LOC111458016 OS=Cucurbita moschata OX=3662 GN=LOC111458016 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.4e-30 Identity = 78/84 (92.86%), Postives = 79/84 (94.05%), Query Frame = 0
BLAST of Tan0011970 vs. ExPASy TrEMBL
Match: A0A0A0KUK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G529450 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.7e-28 Identity = 70/83 (84.34%), Postives = 73/83 (87.95%), Query Frame = 0
BLAST of Tan0011970 vs. ExPASy TrEMBL
Match: W9RT53 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_003318 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 9.1e-19 Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of Tan0011970 vs. ExPASy TrEMBL
Match: A0A5N5I158 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_036587 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.3e-17 Identity = 48/69 (69.57%), Postives = 59/69 (85.51%), Query Frame = 0
BLAST of Tan0011970 vs. TAIR 10
Match: AT1G19240.1 (unknown protein; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.6 bits (174), Expect = 3.3e-13 Identity = 48/90 (53.33%), Postives = 56/90 (62.22%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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