Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGACGTGCAGTGCAAATATGGGAGTCAGTATGACCAAAGGTAATAAATTTGTTGAAATTGAAATTACTTGTGCAAGACTTCTTACGGCTTGCTTTCTAAGACTTTGAAAGTGCTGAAGTAGAAATTTTGTGTGTAAGCTGTTGGGCAATCTGGTCTGATCGAAATGAAATATCCCAAGGCAAAATTACACCAAGTTTAATCAGACGTGTTGAATGGATTCAGGAGTACATTCAAGAAATTGGTAAAACTAGTGAGACAGGAAGATCGAAAGTAATAACAAAAACCTTAGCTGTTCAGAAGGAGAAATGGAAGAAGCCACCTGAAGGAATTCTGAAGTTGAATGTTGATGTTGTCTGCCATCCATCTCTACCGATCACGGGATTAGGAGCGATAATCAGGGATTCAAACGGACACATGCTGGTAGCTAGGTTGAAATTCTGTGAAGGACGTTTAGATCCTCTCTCAGCAGAGGCATTGGTAATGTTAAGTGGTATGAAAATGGCTGCTCAGAATGGTTTTACGAATCTATGGATTTCGTCAAACGCGCAGGTGCTGGTTAATGTTATTTACAAAAATGGCTTTCGATCGGCTACTTAA
mRNA sequence
ATGCAGACGTGCAGTGCAAATATGGGAGTCAGTATGACCAAAGACTTTGAAAGTGCTGAAGTAGAAATTTTGTGTGTAAGCTGTTGGGCAATCTGGTCTGATCGAAATGAAATATCCCAAGGCAAAATTACACCAAGTTTAATCAGACGTGTTGAATGGATTCAGGAGTACATTCAAGAAATTGGTAAAACTAGTGAGACAGGAAGATCGAAAGTAATAACAAAAACCTTAGCTGTTCAGAAGGAGAAATGGAAGAAGCCACCTGAAGGAATTCTGAAGTTGAATGTTGATGTTGTCTGCCATCCATCTCTACCGATCACGGGATTAGGAGCGATAATCAGGGATTCAAACGGACACATGCTGGTAGCTAGGTTGAAATTCTGTGAAGGACGTTTAGATCCTCTCTCAGCAGAGGCATTGGTAATGTTAAGTGGTATGAAAATGGCTGCTCAGAATGGTTTTACGAATCTATGGATTTCGTCAAACGCGCAGGTGCTGGTTAATGTTATTTACAAAAATGGCTTTCGATCGGCTACTTAA
Coding sequence (CDS)
ATGCAGACGTGCAGTGCAAATATGGGAGTCAGTATGACCAAAGACTTTGAAAGTGCTGAAGTAGAAATTTTGTGTGTAAGCTGTTGGGCAATCTGGTCTGATCGAAATGAAATATCCCAAGGCAAAATTACACCAAGTTTAATCAGACGTGTTGAATGGATTCAGGAGTACATTCAAGAAATTGGTAAAACTAGTGAGACAGGAAGATCGAAAGTAATAACAAAAACCTTAGCTGTTCAGAAGGAGAAATGGAAGAAGCCACCTGAAGGAATTCTGAAGTTGAATGTTGATGTTGTCTGCCATCCATCTCTACCGATCACGGGATTAGGAGCGATAATCAGGGATTCAAACGGACACATGCTGGTAGCTAGGTTGAAATTCTGTGAAGGACGTTTAGATCCTCTCTCAGCAGAGGCATTGGTAATGTTAAGTGGTATGAAAATGGCTGCTCAGAATGGTTTTACGAATCTATGGATTTCGTCAAACGCGCAGGTGCTGGTTAATGTTATTTACAAAAATGGCTTTCGATCGGCTACTTAA
Protein sequence
MQTCSANMGVSMTKDFESAEVEILCVSCWAIWSDRNEISQGKITPSLIRRVEWIQEYIQEIGKTSETGRSKVITKTLAVQKEKWKKPPEGILKLNVDVVCHPSLPITGLGAIIRDSNGHMLVARLKFCEGRLDPLSAEALVMLSGMKMAAQNGFTNLWISSNAQVLVNVIYKNGFRSAT
Homology
BLAST of Tan0011800 vs. NCBI nr
Match:
XP_022131661.1 (uncharacterized protein LOC111004786 [Momordica charantia])
HSP 1 Score: 88.2 bits (217), Expect = 7.8e-14
Identity = 47/149 (31.54%), Postives = 72/149 (48.32%), Query Frame = 0
Query: 22 EILCVSCWAIWSDRNEISQGKITPSLIRRVEWIQEYIQEIGKTSETGRSKVITKTLAVQK 81
++ + WAIW DRN + G + R WI Y Q + E R ++
Sbjct: 53 DLAAFTXWAIWCDRNSXAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPS 112
Query: 82 EKWKKPPEGILKLNVDVVCHPSLPITGLGAIIRDSNGHMLVARLKFCEGRLDPLSAEALV 141
+W P + +K+N D C + TGLG IIRD G +LVA+ F L+PL AE
Sbjct: 113 CRWLPPRDSAMKVNSDAACRST--STGLGLIIRDHFGVLLVAKSMFLPMPLNPLFAEIRG 172
Query: 142 MLSGMKMAAQNGFTNLWISSNAQVLVNVI 171
+L +K+AA +T L + S+ Q + ++
Sbjct: 173 ILEALKLAASRSYTRLVVESDCQEAIRLV 199
BLAST of Tan0011800 vs. NCBI nr
Match:
XP_024043083.1 (uncharacterized protein LOC112099827 [Citrus clementina])
HSP 1 Score: 87.8 bits (216), Expect = 1.0e-13
Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 0
Query: 19 AEVEILCVSCWAIWSDRNE-ISQGKITPS--LIRRVEWIQEYIQEIGKTSETGRSKVITK 78
AE E++ V CW IWS RN+ I +GK + S L + E + + Q + K +TK
Sbjct: 708 AEAELMVVYCWVIWSARNKFIFEGKKSNSRILAAKAESVLKAYQRVSKPGTIH----VTK 767
Query: 79 TLAVQKEKWKKPPEGILKLNVDVVCHPSLPITGLGAIIRDSNGHMLVARLKFCEGRLDPL 138
V ++KWK PP+ +LKLNVD + TGLGAIIRD+ G +L +K + R
Sbjct: 768 NRGVDQQKWKPPPKNVLKLNVDAAVNSKDQKTGLGAIIRDAEGKILAVGIKQAQFRERVS 827
Query: 139 SAEALVMLSGMKMAAQ 152
AEA +L G+++A Q
Sbjct: 828 LAEAEAILWGLQVAKQ 839
BLAST of Tan0011800 vs. NCBI nr
Match:
XP_023897447.1 (uncharacterized protein LOC112009345 [Quercus suber])
HSP 1 Score: 87.0 bits (214), Expect = 1.7e-13
Identity = 47/169 (27.81%), Postives = 81/169 (47.93%), Query Frame = 0
Query: 14 KDFESAEVEILCVSCWAIWSDRNEISQGKITPSLIRRVEWIQEYIQEIGKTSETGRSKVI 73
K F+ ++ ++ WA W +RNEI G S V+W+ Y+ E +E+
Sbjct: 915 KSFDEEKIILVVTVAWAFWCNRNEIRHGAEKKSPEAIVQWVNRYLLEYSAATES------ 974
Query: 74 TKTLAVQKE---KWKKPPEGILKLNVDVVCHPSLPITGLGAIIRDSNGHMLVARLKFCEG 133
AV++E W PP ILK+NVD +L G+GA++RD G ++ A +
Sbjct: 975 --VPAVREEVSVTWNPPPPSILKVNVDGATTKNLNFVGVGAVVRDEQGRVVAAMSRKIPA 1034
Query: 134 RLDPLSAEALVMLSGMKMAAQNGFTNLWISSNAQVLVNVIYKNGFRSAT 180
L PL E +G+++A G+ N+ + ++ ++V + S+T
Sbjct: 1035 PLGPLEVEVKAFEAGLQLAKDMGYQNIILEGDSLIIVRALCGISLSSST 1075
BLAST of Tan0011800 vs. NCBI nr
Match:
TXG66206.1 (hypothetical protein EZV62_007481 [Acer yangbiense])
HSP 1 Score: 85.5 bits (210), Expect = 5.1e-13
Identity = 46/154 (29.87%), Postives = 77/154 (50.00%), Query Frame = 0
Query: 17 ESAEVEILCVSCWAIWSDRNEISQGKITPSLIRRVEWIQEYIQEIGKTSETGRSKVITKT 76
+S E+LCV CW +W RN+ G + + + EW ++ + E RSK+ +T
Sbjct: 111 KSPYFELLCVLCWCVWHRRNQSIHGSLAFPVSKIFEWGLAFLHDF---CEASRSKLKGQT 170
Query: 77 LAVQKEKWKKPPEGILKLNVDVVCHPSLPITGLGAIIRDSNGHMLVARLKFCEGRLDPLS 136
+ W+ G K+N D H S ++G+G +I+D++ H+ + + P
Sbjct: 171 GSNVVPCWQALQLGAFKINTDAALHSSDKVSGIGVVIQDNDAHVRASLCQNLSAYFQPQI 230
Query: 137 AEALVMLSGMKMAAQNGFTNLWISSNAQVLVNVI 171
AEAL +L G+ +A NGF + S+A +VN I
Sbjct: 231 AEALAILKGLFLALNNGFVPAVLESDALTVVNSI 261
BLAST of Tan0011800 vs. NCBI nr
Match:
TXG69190.1 (hypothetical protein EZV62_004125 [Acer yangbiense])
HSP 1 Score: 84.0 bits (206), Expect = 1.5e-12
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 0
Query: 22 EILCVSCWAIWSDRNEISQGKITPSL--IRRVEWIQEYIQEI--GKTSETGRSKVITKTL 81
E LCV W +W RN++ K + ++ ++W +IQ+ KT +TG V+ + +
Sbjct: 641 EFLCVVWWRVWYRRNQLVYEKSSQTVHDFDVLDWAASFIQDFKAAKTVDTG--SVVKQRV 700
Query: 82 AVQKEKWKKPPEGILKLNVDVVCHPSLPITGLGAIIRDSNGHMLVARLKFCEGRLDPLSA 141
A KWK P G K+N D +TG+G +IRD GH++ + + G L P +
Sbjct: 701 A---PKWKPSPSGSYKINTDATLDCRAKVTGIGVVIRDCYGHVMASLCQSFPGLLQPQTV 760
Query: 142 EALVMLSGMKMAAQNGFTNLWISSNAQVLVNVI 171
EA+ +L G ++A + G I S++ +VN+I
Sbjct: 761 EAVAVLRGFRLALEAGLCPASIESDSLSVVNLI 788
BLAST of Tan0011800 vs. ExPASy TrEMBL
Match:
A0A6J1BQ49 (uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004786 PE=4 SV=1)
HSP 1 Score: 88.2 bits (217), Expect = 3.8e-14
Identity = 47/149 (31.54%), Postives = 72/149 (48.32%), Query Frame = 0
Query: 22 EILCVSCWAIWSDRNEISQGKITPSLIRRVEWIQEYIQEIGKTSETGRSKVITKTLAVQK 81
++ + WAIW DRN + G + R WI Y Q + E R ++
Sbjct: 53 DLAAFTXWAIWCDRNSXAHGSSVSTPALRCNWISSYFQNYSQAQENKRISPQQSSVPPPS 112
Query: 82 EKWKKPPEGILKLNVDVVCHPSLPITGLGAIIRDSNGHMLVARLKFCEGRLDPLSAEALV 141
+W P + +K+N D C + TGLG IIRD G +LVA+ F L+PL AE
Sbjct: 113 CRWLPPRDSAMKVNSDAACRST--STGLGLIIRDHFGVLLVAKSMFLPMPLNPLFAEIRG 172
Query: 142 MLSGMKMAAQNGFTNLWISSNAQVLVNVI 171
+L +K+AA +T L + S+ Q + ++
Sbjct: 173 ILEALKLAASRSYTRLVVESDCQEAIRLV 199
BLAST of Tan0011800 vs. ExPASy TrEMBL
Match:
A0A5C7ICQ3 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_007481 PE=4 SV=1)
HSP 1 Score: 85.5 bits (210), Expect = 2.5e-13
Identity = 46/154 (29.87%), Postives = 77/154 (50.00%), Query Frame = 0
Query: 17 ESAEVEILCVSCWAIWSDRNEISQGKITPSLIRRVEWIQEYIQEIGKTSETGRSKVITKT 76
+S E+LCV CW +W RN+ G + + + EW ++ + E RSK+ +T
Sbjct: 111 KSPYFELLCVLCWCVWHRRNQSIHGSLAFPVSKIFEWGLAFLHDF---CEASRSKLKGQT 170
Query: 77 LAVQKEKWKKPPEGILKLNVDVVCHPSLPITGLGAIIRDSNGHMLVARLKFCEGRLDPLS 136
+ W+ G K+N D H S ++G+G +I+D++ H+ + + P
Sbjct: 171 GSNVVPCWQALQLGAFKINTDAALHSSDKVSGIGVVIQDNDAHVRASLCQNLSAYFQPQI 230
Query: 137 AEALVMLSGMKMAAQNGFTNLWISSNAQVLVNVI 171
AEAL +L G+ +A NGF + S+A +VN I
Sbjct: 231 AEALAILKGLFLALNNGFVPAVLESDALTVVNSI 261
BLAST of Tan0011800 vs. ExPASy TrEMBL
Match:
A0A5C7IIT4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004125 PE=4 SV=1)
HSP 1 Score: 84.0 bits (206), Expect = 7.2e-13
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 0
Query: 22 EILCVSCWAIWSDRNEISQGKITPSL--IRRVEWIQEYIQEI--GKTSETGRSKVITKTL 81
E LCV W +W RN++ K + ++ ++W +IQ+ KT +TG V+ + +
Sbjct: 641 EFLCVVWWRVWYRRNQLVYEKSSQTVHDFDVLDWAASFIQDFKAAKTVDTG--SVVKQRV 700
Query: 82 AVQKEKWKKPPEGILKLNVDVVCHPSLPITGLGAIIRDSNGHMLVARLKFCEGRLDPLSA 141
A KWK P G K+N D +TG+G +IRD GH++ + + G L P +
Sbjct: 701 A---PKWKPSPSGSYKINTDATLDCRAKVTGIGVVIRDCYGHVMASLCQSFPGLLQPQTV 760
Query: 142 EALVMLSGMKMAAQNGFTNLWISSNAQVLVNVI 171
EA+ +L G ++A + G I S++ +VN+I
Sbjct: 761 EAVAVLRGFRLALEAGLCPASIESDSLSVVNLI 788
BLAST of Tan0011800 vs. ExPASy TrEMBL
Match:
A0A803QGD0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 81.3 bits (199), Expect = 4.6e-12
Identity = 45/155 (29.03%), Postives = 71/155 (45.81%), Query Frame = 0
Query: 16 FESAEVEILCVSCWAIWSDRNEISQGKITPSLIRRVEWIQEYIQEIGKTSETGRSKVITK 75
+ ++E + W IWSDRN GK+ + I+ + Y+Q+ + + ++
Sbjct: 114 YNKPDLESILCLMWFIWSDRNSYVHGKMVKTPIQMLTQSAAYLQQFQSVNSAAKPAASSR 173
Query: 76 TLAVQKEKWKKPPEGILKLNVDVVCHPSLPITGLGAIIRDSNGHMLVARLKFCEGRLDPL 135
T KW+ PPE KLNVD S G+GAIIR+S G ++ A K G
Sbjct: 174 TSPTPVTKWQPPPENKFKLNVDATLDSSRSKIGIGAIIRNSAGQVVGAMSKPAVGNFKSQ 233
Query: 136 SAEALVMLSGMKMAAQNGFTNLWISSNAQVLVNVI 171
EA M G+ A Q ++ ++ +LVN +
Sbjct: 234 EMEAKAMFVGLSWAKQYQIPIDYVETDCLILVNAL 268
BLAST of Tan0011800 vs. ExPASy TrEMBL
Match:
A0A2P5EX40 (Ribonuclease H-like domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_141250 PE=4 SV=1)
HSP 1 Score: 80.1 bits (196), Expect = 1.0e-11
Identity = 54/176 (30.68%), Postives = 85/176 (48.30%), Query Frame = 0
Query: 7 NMGVSMTKDFESAEVEILCVSCWAIWSDRNEISQG---KITPSLIRRV-EWIQEYIQEIG 66
N +S+ + E+ V W IW DRN I G ++ SL+ W++E+ + +G
Sbjct: 11 NFLMSLKLKLSKQDFELWSVISWLIWRDRNSIFHGGVARLAESLLEDAGYWLREFQRLVG 70
Query: 67 KTSETGRSKVITKTLAVQKEKWKKPPEGILKLNVDVVCHPSLPITGLGAIIRDSNGHML- 126
+ ++T+ +KWK P G LKLNVD S G+G I+RD NG +L
Sbjct: 71 -----SEKILASRTMINCDKKWKAPTMGQLKLNVDAAVKCSSGFIGIGVIVRDCNGMVLG 130
Query: 127 VARLKFCEGRLDPLSAEALVMLSGMKMAAQNGFTNLWISSNAQVLVNVIYKNGFRS 178
+ LKF G L P AE + + G+K +G I ++AQ +V + + F +
Sbjct: 131 ASSLKFA-GHLSPFLAECVAVREGIKFKINHGIFPGVIEADAQNIVLALQEKTFNA 180
BLAST of Tan0011800 vs. TAIR 10
Match:
AT4G09775.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 55.8 bits (133), Expect = 4.0e-08
Identity = 38/138 (27.54%), Postives = 59/138 (42.75%), Query Frame = 0
Query: 29 WAIWSDRNEISQGKIT--PSLIRR------VEWIQEYIQEIGKTSETGRSKVITKTLAVQ 88
W +W RNE +I P + + EW++ I + + T + + +
Sbjct: 2 WRLWKSRNEFLFQQIDRFPWKVAQKGEQEATEWVETTINDTANSHSTEQP---NDRPSGR 61
Query: 89 KEKWKKPPEGILKLNVDVVCHPSLPITGLGAIIRDSNGHMLVARLKFCEGRLDPLSAEAL 148
++W PPEG LK N D T IIRDSNGH++ + + L AEAL
Sbjct: 62 SKEWSPPPEGYLKCNFDSGYVQGRDYTSTCWIIRDSNGHVIHSGCAKLQQSYSALQAEAL 121
Query: 149 VMLSGMKMAAQNGFTNLW 159
L ++M G+ +W
Sbjct: 122 GFLHALQMVWIRGYRYVW 136
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_022131661.1 | 7.8e-14 | 31.54 | uncharacterized protein LOC111004786 [Momordica charantia] | [more] |
XP_024043083.1 | 1.0e-13 | 38.97 | uncharacterized protein LOC112099827 [Citrus clementina] | [more] |
XP_023897447.1 | 1.7e-13 | 27.81 | uncharacterized protein LOC112009345 [Quercus suber] | [more] |
TXG66206.1 | 5.1e-13 | 29.87 | hypothetical protein EZV62_007481 [Acer yangbiense] | [more] |
TXG69190.1 | 1.5e-12 | 31.37 | hypothetical protein EZV62_004125 [Acer yangbiense] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BQ49 | 3.8e-14 | 31.54 | uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004... | [more] |
A0A5C7ICQ3 | 2.5e-13 | 29.87 | RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_007481 ... | [more] |
A0A5C7IIT4 | 7.2e-13 | 31.37 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004125 PE=4 SV=1 | [more] |
A0A803QGD0 | 4.6e-12 | 29.03 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A2P5EX40 | 1.0e-11 | 30.68 | Ribonuclease H-like domain containing protein OS=Trema orientale OX=63057 GN=Tor... | [more] |
Match Name | E-value | Identity | Description | |
AT4G09775.1 | 4.0e-08 | 27.54 | BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily prot... | [more] |