Tan0011575 (gene) Snake gourd v1

Overview


Name	Tan0011575
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	double-stranded RNA-binding protein 1-like
Location	LG10: 26105921 .. 26120333 (-)
RNA-Seq Expression	Tan0011575
Synteny	Tan0011575

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTCTTCAAAGGAGGAAAGAAATTCGGGAGGGTTGGATAGAGAAAACAGCGTTAGAGACTACAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAAGAAGGATATTGAAGCGTTAGAGACTTTGTGGGGGAACTGAAGTGAACTGAAGAAAGAAGTGACCTTACTCTGAAGGTAACGCTGCACATTCGCAAGCATCTTCCCAATCTCTAGGTTTCTTCTGAGTTCATTTTCAGGCTGTCGTTCAATCTCTAGAACTAAACGAATCATGTTCAAAACAAAACTTCAAGAGCTTTGTCACCGCAAATTATACAAATTACCTGAATATTCCGTGGTTAAACAAGGTCAAGATCACGACCCGCGCTTTGAGGCCACGGTCACGGTCGACGGCAGGGAATTCCACTCTCAGGCCACCTGCAAGTCTTCGAAGCAAGCTCAAAATGATGCTGCTAAACTTGCTTTCGATTTCTTTTCTCTTCCCTCCTCACCGTCCTGTCCGCCACCGCAACCACAACCGCACCCGCCACCGCAGCCGGAGCAGCGCCTCCCCCAACCTTTTTTTCCGGTGCCATCTCTTCCGCCGACACAACTTCATTGCATTCCCCAATTTCCTCACCCTTCCCTGCATATTTCTTCTTTTCCACAGCCGTCCTTGCCTTCGCAATTGGGTATGAGTTAAGACTCTTTTTTCACTTTCCTTTTACTTATAGGCGCGTTTTGTTGTTGTATACTTGTTGATAGTTTCTATGAAGCCCTGTCTAGAAGTTGGACGGTGTCAGTTAGTTAAATGTTTGAGAAGCACTTTTTTTTATGTCCATGACTAGATGATTATAAGTGGTAAAGAGTAATCCTAGAAAGAATATTAAAGAGTTTTGGGATTACCATTGATTTTTCAGGATTTGAAAATAATGCAGATCATGTCTTATTGTTAAAAGCAGAGAGGAAGGTTTTATATGGAGACTGTGGTTTGAAAGGAACAGGAGGGGTTTTCGTGATCAAAGCTCAAACAGGGAGATTTTTTTGGGAACTTGTGAAAATTTTTGCTTCTACCTGGTGTATCTCTTCTAACTTAATTGTAATTATAGTCAGTTACTCACCAGCTGGGTGGCTTCTTTGTAACCCTTTGGTGTGTGGGGATATCTCGTCTCCCCCCTTTTTTGTGTAATCTCATTTGATAATGAAAGTAATGTTTCTTATAAAAAAAATCATGTCTCCCAACATTCAGTATTCAGATAATACCGTGATTTTCAGCTAATCGAGATGGCATCCGGGACAGTTGGTGGTAGCTTCTCAATCTTTTAGTAGGCTTCAGGTTTCTCTATCATCATGTTTTATATACTTTTTAATTGGCATTAATATTGAAGAAATTGGAGTTAGAAGACAAATCACTAGACTTGGCTGTAAGTTTGATGCTTTGCAGTTTTATTACCTTGGTCTCACGTTTGGTGGGAACCATAGATTTCTTCTCTTTTTGGATCTAGTCTTGGATAAGGTTAGTGGTAAACTTGCTTAATGGAAGAACACCCCTCATTTTGAATGGTGGTACCTTAGCTCAATCCATTGTGGCCAACTCCTAACTATTTCTCTTCCTTGTTTGATGTTCCTGTCAAGGTTGTGAAAGGATGGAAAAGATTATTAGAGATTCTCTTAGGAGATTTTATTTGGAAAGGAGCTAACTTTGATCATGGTTGTCATCGAATCAAGTGGAAATGAAATGCCCTCCCTATTTCTTTAGGTGGTTTGGAAGGGGAAAACTTGAGACACAAAAATGAAGTGTTTCATCATAGGTGGCTTTGGAGATTCACATAAGGAGGCTCTTATGAGAAAAGTTATTTTGAGGCAAATCAAACCTAGAGGAGTTTAAAACCTGCACATCATGGATGGAAGAAACCTATAGGATAGGACAAACAAGCTCAAAGGATTCAATAAAAAAAACTCCAAAACTATGACATTTTGGTACTATACCGTGAAAACTACAACATAAGATTTCAGCGAGGAAGGTGTGAGTTTGTCAGGGAGGAGATCATTGATAATCTACTGAGGTTGCAATTAGAGTGAGAATGTTGCAAGAAAGAGATTTCGGGAGAGAAGAAATATTGATAAAACTAAGCTTGGATCTCCTAGGAGGAATGTGTGGCAGCAGGAGGTGTGGCTGGAGATGAGAAAAGGAAGGAAATTGCTCTGCAAATGACTGAAGATTAACAAGATGAAAGTGGAAAGTTAATGTTGTGGAACTAAAACTTAGAAAATGTGTCTGGAGGGCTAAGATCCCTAAAAAAGTGAAGGTTTTCTTGTGACGGGTCTTCATTTAGGGAAAGCTAAACATAGGGGACGTGCTTTATAGACCGTAGCTATATAGCTCCTCATTCCCATCTTGGTGCGTGATGTGTAGAATGAATGGGAAAATCAGCAACATCTTTTCTTCCTTTGTCCTTGGGCAGCTTCTTTATGGTCAAAGTTATTTGGTTTGTTTGGGCTTAATTGGTGTTTTCCTATAAGGGATGATGAGGCTTTATTTGAGCTTATTTTTGGGTACTCCCTTCAAGGAGAATGGCTGAATTCTTTGGAATAATGCTATTATCATCGCAACTTTGTGGAAGCTTTGGCTAGAGAGGAACCAGAGGGTCCTCAAAGAGTAGTTGAACAACCTTGAGGAGACATGGAATTCTATCGAACTTTTTGCATCCATCTGGTGCTCTTTCTAAATCATTTTGTAATTATGAATTATGATCTTATGCATATTTTGGCTAATTGGGAGTCTTTTTGTAACTCTCCGGCCGCTATGGGGATACTCATCTCCCTTTTTAATGATATATTTTCAGTCAATAGGTTCTTTTGTCTTTGGTTAAAAAAAAAAAAAACTTAGAAAATGTGAGGCAAGTTGGTGTAGAAGTGATTTGGGTTGGATTGAAAGCTCCAACATAGGAAAAAAGAATGGCTGTAAATTAAATCCCAGCACCGAGAATCTCTGCTAGGAATACTTTGGAAGTGTGTTGAAATGACATCTATTCCATAAAATGAACTACAAGCCGAGGGAGAATTTAGGAGCTCCCCTCCCTCCAAATGACCTACGTAATCCTAACCAAAAAGATACTCACACCTGCCTATTTCCCTATAGGCACATATACCCCCTAATGACAACAGTCTGAACATTGGGATGGGACAGTAACGAAACGAGCAAAATGCCCCACTCCTCCACATTCATAACAGTTACCGGATCATCTCCTCTGCTGAGCCTTTTCTTATCCCTCCGCCCACATCGTAATTAACTAGGGCCCCACTCACACATTACTCACTTCATACATCATTTCTCTTTACCCTTACCTATTTCCTATGATAAACCTATGTGATTGGGCCCTATGCCTATGACGTGTGGACTTGGGACCATTGGAGAATTTACAGGTGATGTAGAAAGATCTGTCTATGGGACACTATGTACATGGAGGTGTCAGACGCAAGAAGGCGGTGAGTAGAAGAAGAGTTTACTCTGTTGGTCAAGTTTATCTTTAGGCTGGCCAGAAATTGGAGTTCGCACTAAGGCCTATTCTATATTATGAAGTTGGATCTTACATTAGGTATATCCCAACTAAAGCCAATACTACTGCTCTACCTTGCGTGCAAAGTTAGAACCCATAAGATTCTCAAAATTATGTTCAATTCATAGATTTAAAGGCTCACGGTATGTTTATTATTGCAGAGATTGAAGCATGGTGAGCAAGTTTACAAATGGCCATAGAGAGATAGCGGACACATTGTTAGATTATTGAAGATTACAGATAATCATGACTAGAAATAGTGGCACGAGAGCAAATGCACTACATGCATTGAGAGAGAGCGAATCTTGGGTTGTAGCATATTTGTTTCAAGATGATGGTATACACATCTTCAAAATGTTTCATGAAATGGGCCCTATTAGTAACTGTTTTCAGAAAACCATTTCTGTATTCATGCCTGCCAAATACTTACCTGTTATACTTATTAAGCCTTGCATTTTTAAAAACATAAAATTAAATATGATTCAATCAATTGCACCCAACATACAGTTTTTCATTCCTTTTGTAATCTTAATGACTTTGATATGGACTATACCAATTACTTTGACTTTGGCCTTCTGCAGTTATTTGTTATCCTGGACAACACAATGTCAAGAAGGTTTAATTTATGTGGAATTCAGACAGCATGTTTATTGTCCTAATATGCTAGAATACTTTAAATCTTGTTGTCACTCTCCTTTTCTTGCAGGGACTTTTGTTTCAATAACTAACCAGGACAACAAACTTTCTTCCCCACTGAGACCAGAAGTAAGGCTTGAAGTGGCAAATGAATCTTCTGAACTTGAGGAATCTAGTAAAGGTTTTAAAACATTCAATGTTTATCAAGCTTTCTATATTTCTTTTCCCATCCTTAAAAATAATTATTATTGTTTGTATTTTGAGCCATCAAATTATTTTCTGATTGATTATTTGTGCGCTAGGATACCCATTCTTTATTTTTTGTGAAGGTTGTGCTAGGATACTTATGGTTACAATTTTTAATGTGGTCTGATTCTTCCTGTAGATTCTTCCATCATGAGCAATATGGACGTCAAATTTGCAGCACAGTCAGTCCAACCAAAAATACAAAACACTGATAAGTCTCCTGTGGTTGAAGACATTGACAAAGAATGCACTAAGTTGACTGGTTAGAAAGCATTACGATCTCTATACTCCTCTACATTAACAAAGATATATTGCTTAATTTTATGGTAGCATTGTGGCACATATTGGTTTGTTTAGATATTGTTATGCATGTGTATGGTATGATTTACCTATGTCGTTGAACTCTTTAAAAGCAAATATGATCAGCAACTTTATGTTCGGTTGACATGAATATTAGATTTGCAATATGGAGGTAGATGCCAGCTTCTTATCTAAAAACATATGGAGGTAGAACGTCATGTTTACATTTGTTTCTTTTTTGTTTTTGTTTTTTGTTTTTTGGAAACACATGCTCAAATTTGTTATTGTATACTTTGTTGTAATGTATGCTTGGAGAATGGAATAGGAAAACTTTTTTTTAATGAGACTTTATGTATGGATGGACATAGATTTGTACGGTTTAATTAGCTTTTAATCATCTAACAGTGCTAGGAAGAGTAAATTTGTAGCTTTGCCTCTCTTTTGTCTAATTGGAGAAGTTTATTGTAACTCTTGGATTGGAGTCTTTCTTTTACCTCTGATTATTATTATTATTAAAAAAAAGTTCATACATCATTGAAACTGTTTCTTATAAAAAAAAGTAAATTGAAGAGATACAAAACTGCACATCCTTTTGCTCTGTATAGCTTATCTTCTTTAATCTCCAATTGGAGAGTTTTCTTGTAATTCGCCAATAGGTGCTTGGAATTTTTCTCCTTTATTTCTACCATCAATGAAATTGTTTCTTGTCCCAAAAAAAGAAGATATGTTACCTATCAAAAAAAAAAAAAAGAAAAAGAAAAATAAAAAAGAATTGGTGACTAGTGGGTTTCACATATGCAAGGAGAGGGAAGAATTAGTACGATTGGGAGCAAGTTACCCTTAACACTATTGAGGTGATTAGAGAGGCTAGGTTAGTTGGGTTTTTTGTTTGTTAGAGTGCGCAACTGCTACTAACATGGGGAGAGGACTACTGAAAGGAGGTTAGAATGGGAAAGTCCCACCACTCCAGTGCTTGGAAAGTCTAGTACCTAGAGTATCCACATGTTCGCACCTTAACTATATTTGGTTGCCAAGAAACTCGTAAGATCTTAAATCCTAAAGGGGCTATTTGGGGCACAGGTTATAATAACCTGTGGAATACTCTGCACCCTAAACACAGACTATTATAACCCCAAACTATATTACTCTGCATTTTAAATAATATTATATGATTCTACAGACTCTAATAACCCACAGACTATTATAACTCCTTATTATTATAATCCACTCAGTGCCCCAACCAACCCCAAATAGATAGCTACCATGGTATGAGCTCATTTCATTCAAAGGCCTTTAGGTTTTTCATTGGTCCGAGTGACTACTAGGCCAACCCATGGTTATTCTCATGGGTTGTTTTTGGGATGCCAATTATTGATATTCTCAAGTGCATTATCATTGGCAGCTAAACAAATTGTTTGGGAATGCTGGAAGGGTTGCATGGAAGGTCAAATTGGTTCTGTTGAGGAGAGAGGGATTGGAAGAAATGAGGAAGCGGTGAGAGGCAATCTGCAGAAAAATTGGATGATGGGAAAGAACATAGAAATGTTGCTTGAAGGCAGATTGTTAAATGGAAACATTCAATGTATAGGGTGCAGAACCAGCCATAATAATCAATCCTAAAGGAATGGCTATAAGCTTTTCTTCTATGGGCATGAAGATTCAAGCACTTCTCTAAGAGGAATGGATCGAAGCGAGAGGAGGAAAGTTGGGGTCACCTACATTTTCTTTTCCGGAAAGGTTTTGATGGTTCCATGTTTAGAGCCATTTTGGTAAATAGCTTGATTCAGGTAGAGATTGATTAATTTGGATTGGAGAAGTAATGTAATAAGTTCCTCCTGGTGGGAATTGTAAACCCCCAACCTTTTAGGTTACTTCCTTTTTGTTTATTTCAATATACACCTTTTTTTTATTTTTAAAAAAAAGAAATTAGACTAAGCTGTAGGTAACTTAGGGAATGAAGACTCACTTGCTTGGAGGGATGGAACTTGGAAGGAGACCAATTTAGGATTGGACAAGATTCAAACCACTTTATTATTGAAATTTTGACCATTTCAAGAGAAAAAGCTACACGGTTTTTGGCTCCATGCCAAGGACAATTTGGGTTCAAGCAACATTGTCCACAAAAAAGAAAGGGATGGATACTTAAACTTGATATTGAAAAAGTTTTCGATGGTGTAGATTGGAATCTTTTGGAAGCTCTATTGAAGTTAAAATGTTTTAGTGATAACTGGATTCAATGGATCATTGGGTGTGTCAAGAACCCATAATATTTGGTCTTCATCAATGGCTGTTGAAGAGGAAGAATTATTGCTAGAAGAGGTATTCGCCAAGGTGATCCTCTTTCACCTTTCATGTTTCTATTTTACAATTTGCTGATGATACTCTTATATTTTGCAAAGATGATGAATTCATGATGGGAAATTTGATTTAGACTATTGAATTGTTTGAAAAATGCTTTGGGCTAAAGGTTAATGGGTAAAAATCATCCATGGTATCAATGGGGAGGATTCTAAAATTGGAGGAGGTTGCGGAATCTCTTGGATGCAAGAAGTTATTTTACCCTTCACTTATTTGGGCTTACCTTTGGGTGGTCATCCCAAAGATATTTTTTTTTTTGCAGCCGGTGATTGTTCGTGTGAATAAGAAGCTAACAGGTGGAGAAGATTTAATTGTCCCGAAGGGGTAGATTGACCTTACGTAGTTCAGCTTTATCGAGTATTCCGCTATATTACATGTCTTTTTTTGAAATGCCGGCTCAAGTCTCCTTGCACATGGACAAACTTATCTGGACTTTCTTCTTGGAAGGCAAAGAGGAGGAAAAAGTTTCTCATCTAGTAAGTTGGAAATCAGTTTCCAAATCAACAATTTCTAGTGGATGGGGAATTGGTGTGTTAAAATTGCAAAATCAAGCTTTGTTAGCTTCTAAATGGGGCTGGAGATTTGTCGTTGACTATTCCTCTCTTTTTTGGAAAAGAGTTGTATCTAGCATTCATGGTGTATGTCCCGGATATTGACATACTTCAAAGTCCCAAAACTTAAGTTTGCGTAGCCCTTGGATGAATATATCGAAGATTTGGTCTCAAGTTTGCCATTTAGCTCATTTAAACTAGGAAATGGTCAATGATTCCGATTTTGGGAAAATAATTGGTCTGGAGATGTTCCTCTAGAATCTAGATTTCCTTGGTTGTTTTCAATCTCTTCCAATCGAGCTGGTTGAGTTTCGGATTTTTAGGATTCAAACTCTAATTCATGGAGTTTAGCTTTTAGAAGACTAATGAAGGATGATGAAATAGTGGAATATCAAAATATTTTGGGGATTCTAGCAAACTTGAAGGTTAATATGCAGTTTGATTCCAGATCTTGGTCCATTGATTTTTTCTCTGTTAAACTTTGACCAAATTCTTTGCTGCAAGGCCCTCTATGGATAAATCTCTTTTTAAAGCCCTATGGAAATCCAATTGTCCTAAAAGAGTTAGCGTATTTATTTGGATTCTTTTGAATTGGCATTTGAATATTTCTGATGTGTTGCAAAGGAAATTACTGTTGTTCAAACTTCAACCATCCATTTGTTTGCTCTCCCATCAGAAAGGGGAATCTCTATCTCATATATTCTTTGAATGTGATTTGTGTTGGATTGTTGGTCCAAACACACCACTACCCTTCAATGTAATAGGACAAAGATCTCCATTCTTCCCATAAGAATCTCCTTTCCCTATAATGATTAGGCCCATAAACATTGGTGATCCAAACACTGACTCCGCCTATCAACAAAAATTTGATTGAAATTGAGTATCCTCCCTTCAACACCTCCTGCACCTGAATCTTACTCTCATCCCACAAGACCAATATGCCACCCAATCTGCCGTAAGCTTCCACATTCCTTGAACTCCACAGCGACTTTATTATACTACTATCGGTTTGGCCTAGCTTTGTTTCCTGAATCAACACAACTTCTGCGAAAAGCTTTTGAATATAATTTTTGAAACTCACCCTCTTAGAGCTATCCCCCAAACCCCTCGTATTCCATGATAAGATCTTCATTTGCCCACCTTCGGAGAGGTGGATGATACAACTTCCTTGAATTGTAAGCCACTAGCCTTTATTATGGAGGCGAATTGTGACAAAACAGGGTGAGCCCTCAACTCCTCCTTTAGATTTCAATGACTTATCTTTAGTGATTGGTGGGGAAGAAACCTCCTGAAACAATTCCTCCAAATTGAGTCGCGGGGGATCGAGGGCAAAAGACCCTTTGCTTGATTAGGACTAATTGGATCCAATCTGAAGGGTGTGGAAGGAAATGGCTGCCTCATAGGATGTTAGGAACTCCCCTTCTATCTCAGATTCCGAAAGATCCAATCTGAAGGGTGTGGAAGGAAATGGCTGCCTCATAGGATGTTAGGAACTCCCCTTCTATCTCAGATTCCGAAACAAGGCTTCTGCCATCATATGGAGCTTATTCCTTCTTTGGGCAGCCATAAAGCGATGAAAGAAGCTTGAATTAACATCCCCTTCGTTCAGCCATTTCAACTTACAACTTTGCCTCCACATTGCTTCTCTTTTAACGGTCAAGGTCATCAACTGTGCTTTTATAGAATACCTTTGAGGAATTTGGGCAGCTTGAAGATCCTCTGATTCTTCCATTGAACCCAACACAGCGAGCTAGAATAAGCTACTCCTTCTGGTGCTTAATGCAACCAAAAGTCTCCTTGTTCCACGTTCTAACTATTGTCTTAAGGCCTTTTTGTCTTTGAATGAATCCATGTCCTGACCAGCCCCTTAAAGGATGTATTAAGCCATCAATATTCAGTGGCTAAGAATTTGTCGACTAGTGTGAGGGTGGTGGACTCTCAAGCGTACAATCTGTTGCACAGGGGGTTTTTCGGAAGCCTTGATTTTGAAATACAATTCCATGGGTTACAACAGTGTAACCCAATGGGTTTGTGCCATATTTTCCTCTTCCATTTGCCGTTTTCTATTTCCGACGACCACTTCGACAACAACTTCGATGACAACTCCGGCAACCACCCGACGACCATTGACAACGAAAACTCCGATGACCACACCGGTGACTCGACCACCACCGACGATTATCTCCGGCGATCACTGCGATCAGAACTCTATAGATCAGTTTGACGACCACCCTTGCGACTCAACCCACTCCAACAACTCGACACTCCAATGACCCAACCAACACGACCCGACTTGTCCGAATCACCGCCAAGGACCATCTGAAAACCACTTCGATGACCCAACCACCAAGCAACCGTAGTTGATGACCACTTCGACGACCCGATGACCATAGTTGACGACCACCCTTAAAATTTGACCACCTAACAACCACCGTAGATGACTACTTAGTGACTACTCCGATGACTCGACCACCCCAATGACTACCTTGGCAATCACCTTGATACCCTGACGACCCAATCACCGAAAACCACTATTGATGACCACCTGGTGACAACTCTAGTGACCACTCTGGTGACCTGACTACCTTGTTACCCGACCATCCTAATGACCACTCCGACAATGACTCCAGCGACCTGACCTAGCAACCCAACCACCCTAATGATCACTTCGACAACGACTCTAGCGACCCGACAACCACTGCCACAACCACTCAGCAACTACTCCAATGACATGACCACCCTGATGACCACTACAACGACCTGACTACAACTGTCGACAACCACCCAACAACCGAATCGTCGACTTGACCACTGTGCAATCACCACCAGTGACCACCTCGATAACCCAACCCCCCCAACCCGACCACTCCAACGATTCAACCACCTAGTCAATTTTTTAAAAGGTTAAAATAAAACTAAAAATGACCACTAAACAAACTTTTTTAACCCATTATATATTTGAAATAGGTTTCAAAATACTCTGTAGAATAGAGTTTCTAATATTTTAACTTTTAAAATAGAATTTGAATTTTATAACTCATTTTTTCTTGAAATGTTTTTCAAAATACAGTGTACAATTTTATTTAAATTCCATAATTTCTTAAATCACCCTCCAATATTTAAATTTTCAAAATAGAGTTCCAAAATTAGGTTTATAACTTTGTGAAATGGCATTTTAAATTCCCTAATTTCTTAGATAAACTTCTAATTATTTAATCTCTACAATAGAGTTCCAAAAATAGGTTTCTAAATGCTTTATGAAATAGAGTTTTAGATTATCTAATTTATTAAATAGACTTTCAATTTTTTTAAATTATATGGCCTTACTAATGTCATTTAATCTTACATCATAATGAATGGAGTGAATGAGATATTAAAATACTTGTACAAACTACACATTCATATTTAATTATTATTGAAACAATTGATCCACATAATTGGTTAAAATATTGATATGCAATTCAACAAACAATTATCGAGCTAAAAAATTTGTTTTGAAAAAAAAAAACTCTTAAAAAACATAAACAAACCCTACCCAACCTTGCACCCCAAACACAAGTTTCAGCAAACCAGACAATTCTAACCCTGCATACCAAACACAGTAATTAGGAACTCTAGGGTTTCTAATTCCAACAAGGATTCTTAGGGCTCCTAATTCCCAGGGTTTCTGATTCCAAACTAGTGTGCCAAGCTAGTTTCTTACCCTGATTCTTGGATGATGTTGGTCCGTCATAATTGATATGGAGGTCAAATTGGCTATCTTTTGGACTCCTTTATTCAACCTCCTCATAGTTTTTATCTGCTTGGTTGCCTTTGTTGGAAGGGGGAGAATGTGACTATGGCACTTAATCCTGTCTTTGTTGGGAAGAGTGCAAATGCGACAATAACTAAGCCTCCAAATTTTCAATCCAACAAAAAAGGGTAAAGTTACAGCGAAAGTGATTAATTGACATTTAAGGGAATTACAAATGCAGATATGCAAAGAGGAGAGAACATAGCTTATGTTTTCTTTCAACGTGAATTTGTTGATGTGAGAACAAGGACTTGCAAATATTGGTTCTACAAAGGGGTCAAATTGGATTTTGAAGTGTATTGGACTTTTTTCGGGGGGGTTGGCATTGCTAGAGAATTACAAATAAAAAAACAAGGCCTTATCAAAGCACCACAATCATTCAGGTCATATCACTATATCTTTTCATAATCTTATTTGTAGAAGGTGCAGAAAAATTTGGTGTTGTGGAAATGCTTATTTTGAAAAGGAAGAAAGTTGACTCTTATTTAGTTCGTGCTGGGTGGTATTCATCAATCTTTGATTGAATTGGAGATGCTGATTCATTGGCATGGTCATTCCAGTAAGGAATACTACTTGGTTTATTCTTTCTACAGTCCACACATGATTCCCTAAACTTTCATGTAGGATACTAGGCTTAGCTCTAGTTGTGAGTATTCATATGGATAGACATCTGATAAAATTGGAACGACACAGAGAAGATTAGCATGACCTTGTGCAAGGATGACAAACACAAATTGAGAAATGGTCCAAATTTTTACGAATAAAAAAAAAGAAAAAGGAAAAAAACTAATGAAAATCACACACGAAAGAGAGAGAAGAACTAGTAAAACTATGTGGTTAATTCTGCTAAACTTTAGATGACGTCCCTGTGGGAGTTGGGGAGGTTAGGTTAGGTTGCATTCTGTCTGATAGTTTTAGCGAGGAATTGGGACTAGCGAGGGGAAGACACTACTGATAAGAAGCTAGAGAGAGAGAATGGGGAATCCCAGCATCTCAAATGCCTGGGTAGTTGCGATTACTATCACCAATTTTTTTTAGTTCTTTCATGTTATTTTTTTCAATGCATCTAACATTTCTCAAAAATTGGACTTCATACTATCCCTCAATTATGAATGATCATTTATCACAACTTGAATATTTCTTTTAATGTTCATAGGTATGCAACATTTGTACAAGAACCAATTGCAAAACTTCGCTCAGAAGAGAAGCCTCACTTTGCCTGTATACACATGTGAGCGTGATGGCCCACCTCATGCTAGTCGTTTTAGGTGTAAAGTGGAAATTGATGGAAAGACATATGAAAGCCCAGAATTTCAGGTCACATTGAAAGATGCAGAAAATGCAGTTGCAAAAGTTGCTTTAATGTCGTTATGTCAAGATGGAGCTCAACAGGTTAGTACTCCAATTCAAACTAACTTTCATAAATGAAGCAAATAATTAATGACCATGCATGTGAGTGTGATTTTTTGCTTAAATGAAATAGCCACACTTACGTGTTTCTTCTACAAAATTTTTGGATATTTGTTTCTCTTACAAATTACAGGATTCTGGCCTTTACAAAAATCTCTTGCAAGAAATGGCTCAAAAAAGAGGTCTAGGTTTACCGACTTATTCAACATTGCAATCTGGTGAAGTTCATGTACCGATTTTTGTTTCAACGGTAAAAATAGGAGAAGAAACTTTTGAAGGAGAACGGTTGAGAACTAAGAAACAGGCTGAGATGAGTGCAGCGAAAGTTGCTTATATTACCTTAAAGGAGGGTAAGTGTTATTGGCAATAATATATTTGTTAATTTATTATTTTTGGTCAGTTTTGGTTCCAACATGACTTTTAATCTCTTTAAGTAGACACATTTGTTTATTTTATGAGATTTAGGTATGCAATGTGTATAAGGTTATGCCAAGATGCGTCATGAGAGTTAGTGGACTAAAGCAGAATATCTGTTTTCATGTTCAAACTATTGATCACTAGTTCTGGAAGGCTTCTTACCTGTCTTACTGTTGCCTTGCTTAATCAGAAAGCAAATTTGTAGCATTTACTATAATTTATGCAATTATAATCTAGGCAAGTCAAGTAAGAACCCTTTGATTGCATCGCAAGTCGTCTCATCTAGCTTGCAATCTGATGTCATCACTGACCTGGAACCGCAAGTGAGCTCCGACCTTGTAATTTCACATCCAAGCATGACAATTGAGAAACGACCCAACGATGGAGGTGATTTTTCTTCTTGGCTATTATATTTTCTGCTCTTTTCCTTGGCTATTACATATATTTCCAAACGTTAGTGATGCAGGACATATCATATGAACTGATGGCACGTAATCAAAACCTTTCGACTTGCATAAATCCATGCATAAACCCTTGCCCAAACTGGGCATAGAAAACTTATTCAAACATTGAAACATGTTGGATGCATTTCATCCTTTTATTCCATCCAAGTTTCTGACTATTGCCATCTTATATTCTTCATGGAAAGTTTTTGTGCTACATCAGTCATAGTCTTATATTCAATGTTTAGGATCTCAAAGCATTTCAACAAGAAAGAGAGCTCCATCTTCTTGTGACCTTGGTTATGAAGTTCCTCGTGAGACCAACGATTATGTTTTGAATTTAGTCTCAAAGCTAGAAGCTGGAAAGAGTTCATCTTCCAAAAGAGTCTTCGTTTGTCCCCGTCAACCGAATATGACATTTCCAAAGGACAGTACCGTATTGCCAATAAGTGATGACCAATGGGTTGCATTCTCACTTTCGACCGAAGGTAGTCAATAAACATCGCTGTGATTAACCCAGTTTGCTCAGGAGTGAAGTGTACCAACTCCTAAGGCTTAGGTAGTTACAGCCGTGTGTACAACTCTAACTCAGAATAGTTGATAATACTTGGATCAGCGCAGTTGATGTTGCAATGTAAACTTAGATGTAATGGGTTTCGTTTGATCTTCACTGTAGAAAAGATCTATTATATTATAGTTAATGTATTTTATCAGATGTTATATCA

mRNA sequence

ATTTTCTTCAAAGGAGGAAAGAAATTCGGGAGGGTTGGATAGAGAAAACAGCGTTAGAGACTACAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAAGAAGGATATTGAAGCGTTAGAGACTTTGTGGGGGAACTGAAGTGAACTGAAGAAAGAAGTGACCTTACTCTGAAGGTAACGCTGCACATTCGCAAGCATCTTCCCAATCTCTAGGTTTCTTCTGAGTTCATTTTCAGGCTGTCGTTCAATCTCTAGAACTAAACGAATCATGTTCAAAACAAAACTTCAAGAGCTTTGTCACCGCAAATTATACAAATTACCTGAATATTCCGTGGTTAAACAAGGTCAAGATCACGACCCGCGCTTTGAGGCCACGGTCACGGTCGACGGCAGGGAATTCCACTCTCAGGCCACCTGCAAGTCTTCGAAGCAAGCTCAAAATGATGCTGCTAAACTTGCTTTCGATTTCTTTTCTCTTCCCTCCTCACCGTCCTGTCCGCCACCGCAACCACAACCGCACCCGCCACCGCAGCCGGAGCAGCGCCTCCCCCAACCTTTTTTTCCGGTGCCATCTCTTCCGCCGACACAACTTCATTGCATTCCCCAATTTCCTCACCCTTCCCTGCATATTTCTTCTTTTCCACAGCCGTCCTTGCCTTCGCAATTGGGGACTTTTGTTTCAATAACTAACCAGGACAACAAACTTTCTTCCCCACTGAGACCAGAAGTAAGGCTTGAAGTGGCAAATGAATCTTCTGAACTTGAGGAATCTAGTAAAGATTCTTCCATCATGAGCAATATGGACGTCAAATTTGCAGCACAGTCAGTCCAACCAAAAATACAAAACACTGATAAGTCTCCTGTGGTTGAAGACATTGACAAAGAATGCACTAAGTTGACTGGTATGCAACATTTGTACAAGAACCAATTGCAAAACTTCGCTCAGAAGAGAAGCCTCACTTTGCCTGTATACACATGTGAGCGTGATGGCCCACCTCATGCTAGTCGTTTTAGGTGTAAAGTGGAAATTGATGGAAAGACATATGAAAGCCCAGAATTTCAGGTCACATTGAAAGATGCAGAAAATGCAGTTGCAAAAGTTGCTTTAATGTCGTTATGTCAAGATGGAGCTCAACAGGATTCTGGCCTTTACAAAAATCTCTTGCAAGAAATGGCTCAAAAAAGAGGTCTAGGTTTACCGACTTATTCAACATTGCAATCTGGTGAAGTTCATGTACCGATTTTTGTTTCAACGGTAAAAATAGGAGAAGAAACTTTTGAAGGAGAACGGTTGAGAACTAAGAAACAGGCTGAGATGAGTGCAGCGAAAGTTGCTTATATTACCTTAAAGGAGGGCAAGTCAAGTAAGAACCCTTTGATTGCATCGCAAGTCGTCTCATCTAGCTTGCAATCTGATGTCATCACTGACCTGGAACCGCAAGTGAGCTCCGACCTTGTAATTTCACATCCAAGCATGACAATTGAGAAACGACCCAACGATGGAGGATCTCAAAGCATTTCAACAAGAAAGAGAGCTCCATCTTCTTGTGACCTTGGTTATGAAGTTCCTCGTGAGACCAACGATTATGTTTTGAATTTAGTCTCAAAGCTAGAAGCTGGAAAGAGTTCATCTTCCAAAAGAGTCTTCGTTTGTCCCCGTCAACCGAATATGACATTTCCAAAGGACAGTACCGTATTGCCAATAAGTGATGACCAATGGGTTGCATTCTCACTTTCGACCGAAGGTAGTCAATAAACATCGCTGTGATTAACCCAGTTTGCTCAGGAGTGAAGTGTACCAACTCCTAAGGCTTAGGTAGTTACAGCCGTGTGTACAACTCTAACTCAGAATAGTTGATAATACTTGGATCAGCGCAGTTGATGTTGCAATGTAAACTTAGATGTAATGGGTTTCGTTTGATCTTCACTGTAGAAAAGATCTATTATATTATAGTTAATGTATTTTATCAGATGTTATATCA

Coding sequence (CDS)

ATGTTCAAAACAAAACTTCAAGAGCTTTGTCACCGCAAATTATACAAATTACCTGAATATTCCGTGGTTAAACAAGGTCAAGATCACGACCCGCGCTTTGAGGCCACGGTCACGGTCGACGGCAGGGAATTCCACTCTCAGGCCACCTGCAAGTCTTCGAAGCAAGCTCAAAATGATGCTGCTAAACTTGCTTTCGATTTCTTTTCTCTTCCCTCCTCACCGTCCTGTCCGCCACCGCAACCACAACCGCACCCGCCACCGCAGCCGGAGCAGCGCCTCCCCCAACCTTTTTTTCCGGTGCCATCTCTTCCGCCGACACAACTTCATTGCATTCCCCAATTTCCTCACCCTTCCCTGCATATTTCTTCTTTTCCACAGCCGTCCTTGCCTTCGCAATTGGGGACTTTTGTTTCAATAACTAACCAGGACAACAAACTTTCTTCCCCACTGAGACCAGAAGTAAGGCTTGAAGTGGCAAATGAATCTTCTGAACTTGAGGAATCTAGTAAAGATTCTTCCATCATGAGCAATATGGACGTCAAATTTGCAGCACAGTCAGTCCAACCAAAAATACAAAACACTGATAAGTCTCCTGTGGTTGAAGACATTGACAAAGAATGCACTAAGTTGACTGGTATGCAACATTTGTACAAGAACCAATTGCAAAACTTCGCTCAGAAGAGAAGCCTCACTTTGCCTGTATACACATGTGAGCGTGATGGCCCACCTCATGCTAGTCGTTTTAGGTGTAAAGTGGAAATTGATGGAAAGACATATGAAAGCCCAGAATTTCAGGTCACATTGAAAGATGCAGAAAATGCAGTTGCAAAAGTTGCTTTAATGTCGTTATGTCAAGATGGAGCTCAACAGGATTCTGGCCTTTACAAAAATCTCTTGCAAGAAATGGCTCAAAAAAGAGGTCTAGGTTTACCGACTTATTCAACATTGCAATCTGGTGAAGTTCATGTACCGATTTTTGTTTCAACGGTAAAAATAGGAGAAGAAACTTTTGAAGGAGAACGGTTGAGAACTAAGAAACAGGCTGAGATGAGTGCAGCGAAAGTTGCTTATATTACCTTAAAGGAGGGCAAGTCAAGTAAGAACCCTTTGATTGCATCGCAAGTCGTCTCATCTAGCTTGCAATCTGATGTCATCACTGACCTGGAACCGCAAGTGAGCTCCGACCTTGTAATTTCACATCCAAGCATGACAATTGAGAAACGACCCAACGATGGAGGATCTCAAAGCATTTCAACAAGAAAGAGAGCTCCATCTTCTTGTGACCTTGGTTATGAAGTTCCTCGTGAGACCAACGATTATGTTTTGAATTTAGTCTCAAAGCTAGAAGCTGGAAAGAGTTCATCTTCCAAAAGAGTCTTCGTTTGTCCCCGTCAACCGAATATGACATTTCCAAAGGACAGTACCGTATTGCCAATAAGTGATGACCAATGGGTTGCATTCTCACTTTCGACCGAAGGTAGTCAATAA

Protein sequence

MFKTKLQELCHRKLYKLPEYSVVKQGQDHDPRFEATVTVDGREFHSQATCKSSKQAQNDAAKLAFDFFSLPSSPSCPPPQPQPHPPPQPEQRLPQPFFPVPSLPPTQLHCIPQFPHPSLHISSFPQPSLPSQLGTFVSITNQDNKLSSPLRPEVRLEVANESSELEESSKDSSIMSNMDVKFAAQSVQPKIQNTDKSPVVEDIDKECTKLTGMQHLYKNQLQNFAQKRSLTLPVYTCERDGPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAVAKVALMSLCQDGAQQDSGLYKNLLQEMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKIGEETFEGERLRTKKQAEMSAAKVAYITLKEGKSSKNPLIASQVVSSSLQSDVITDLEPQVSSDLVISHPSMTIEKRPNDGGSQSISTRKRAPSSCDLGYEVPRETNDYVLNLVSKLEAGKSSSSKRVFVCPRQPNMTFPKDSTVLPISDDQWVAFSLSTEGSQ

Homology

[Close]

BLAST of Tan0011575 vs. ExPASy Swiss-Prot
Match: Q8H1D4 (Double-stranded RNA-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=DBR4 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.0e-37
Identity = 91/198 (45.96%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 213 MQHLYKNQLQNFAQKRSLTLPVYTCERDGPPHASRFRCKVEIDGKTYESPEFQVTLKDAE 272
           M H+YK QLQ +A + +L LPVY  ER+GPPHA RFRC V   G+T++S EF  TLK AE
Sbjct: 1   MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60

Query: 273 NAVAKVALMSLCQDGAQQDSGLYKNLLQEMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKI 332
           +A AK+A+ SL     +     YKNLLQE+AQK    LP Y+T  SG  H P F STV+ 
Sbjct: 61  HAAAKIAVASLTPQSPEGIDVAYKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTVEF 120

Query: 333 GEETFEGERLRTKKQAEMSAAKVAYITLKEGKSSKNPLIASQVVSSSLQSDVITDLEPQV 392
             + F GE  +TKK AEMSAAKVA++++K G S++     S  + S  Q DV ++++   
Sbjct: 121 AGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQT---GSPTLPSERQEDVNSNVKS-- 180

Query: 393 SSDLVISHPSMTIEKRPN 411
           S   + S PS  +   P+
Sbjct: 181 SPQEIHSQPSSKVVMTPD 193

[Close]

BLAST of Tan0011575 vs. ExPASy Swiss-Prot
Match: Q5N8Z0 (Double-stranded RNA-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB1 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 3.2e-36
Identity = 165/572 (28.85%), Postives = 223/572 (38.99%), Query Frame = 0


Query: 1   MFKTKLQELCHRKLYKLPEYSVVKQGQDHDPRFEATVTVDGREFHS-QATCKSSKQAQND 60
           M+K++LQELC ++ +  PEY+    G  H P F ATV+V+G EF + +   +S+K+A N 
Sbjct: 1   MYKSRLQELCQQRRWAPPEYTHRCAGPAHAPLFGATVSVNGVEFRTPEDAARSAKEAHNI 60

Query: 61  AAKLAFDFFSLPSSPSCPPPQPQPHPPPQPEQRLPQPFFPVPSLPPTQLHCIPQFPHPSL 120
           AAK AFD  S     S P P     PPP P +                            
Sbjct: 61  AAKAAFDHLS-----SLPLP-----PPPPPSE---------------------------- 120

Query: 121 HISSFPQPSLPSQLGTFVSITNQDNKLSSPLRPEVRLEVANESSELEESSKDSSIMSNMD 180
                                                   N+SS                
Sbjct: 121 ----------------------------------------NQSS---------------- 180

Query: 181 VKFAAQSVQPKIQNTDKSPVVEDIDKECTKLTGMQHLYKNQLQNFAQKRSLTLPVYTCER 240
                                                YK+QLQ +AQK+   LP Y   R
Sbjct: 181 -------------------------------------YKSQLQIYAQKKGKLLPSYQTIR 240

Query: 241 DGPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAVAKVALMSLCQDGAQQDSG-----L 300
           +GP HASRF+  V +DGK +ESPE+  T+K+AE+A AK+ALMSL Q+ +  +        
Sbjct: 241 EGPGHASRFKSVVTVDGKAFESPEYFHTVKEAESAAAKLALMSLPQEASSSEQVPVQPLS 300

Query: 301 YKNLLQEMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKIGEETFEGERLRTKKQAEMSAAK 360
           YKNLLQE+AQK G  LP YST   G V VP+F STV   + +F+GE   TKKQAEM+AA+
Sbjct: 301 YKNLLQELAQKHGFSLPVYSTTSDGSVQVPMFKSTVVFQDGSFQGEPANTKKQAEMNAAR 360

Query: 361 VAYITLKEGK---------------------SSKNPLIASQVVSSSLQSDV-------IT 420
           VA+   ++ +                     S+    IA  V S  L S          T
Sbjct: 361 VAFQHFEDRRKNALSSTVLRGPHLGQGTVHISAGQVKIAEPVFSVPLASTATSHSATGAT 420

Query: 421 DL-------------------------------------EPQVSSDLVISHPSMTIEKRP 480
           D                                      EP+   +++ S P +T     
Sbjct: 421 DRDYHSLGSTNPLPIAKSTNCADVHIQPCEFKDEKPAFPEPKTVLEVMDSSPELT---PL 438

Query: 481 NDGGSQSI-STRKRAPSSCDLGYEVPRETNDYV---------LNLVSKLEAGKSSSSKRV 492
            D  S  + ST   + S C         T +            + VS    G S  + RV
Sbjct: 481 EDAYSAPVASTSTVSSSGCGSDPLASASTVNSTGCGSVPLASASTVSSTGCGCSLLTNRV 438

[Close]

BLAST of Tan0011575 vs. ExPASy Swiss-Prot
Match: Q9AV50 (Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB6 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 8.2e-32
Identity = 75/167 (44.91%), Postives = 105/167 (62.87%), Query Frame = 0


Query: 216 LYKNQLQNFAQKRSLTLPVYTCERDGPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAV 275
           +YKNQLQ  AQ+    LP YTC R+GP HA RF+  V  +G+ +ESP F  TL+ AE+A 
Sbjct: 1   MYKNQLQELAQRSCFNLPAYTCLREGPDHAPRFKAAVNFNGEQFESPGFFTTLRQAEHAA 60

Query: 276 AKVALMSLCQDGAQ--------QDSGLYKNLLQEMAQKRGLGLPTYSTLQSGEVHVPIFV 335
           A+VAL +L + G           ++G+YKNLLQE+AQ+ G  LP+Y+T +SG  H+P+F 
Sbjct: 61  AEVALAALARRGPSYSLAARILDETGVYKNLLQEVAQRVGAPLPSYTTERSGLGHLPVFT 120

Query: 336 STVKIGEETFEGERLRTKKQAEMSAAKVAYITLK-----EGKSSKNP 370
            TV++   TF G+  + KKQAE +AA  A+ +L+     E  SS  P
Sbjct: 121 CTVELAGITFTGDPAKNKKQAEKNAASAAWSSLRQLVRQEASSSNEP 167

[Close]

BLAST of Tan0011575 vs. ExPASy Swiss-Prot
Match: Q9LJF5 (Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.4e-31
Identity = 69/155 (44.52%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 216 LYKNQLQNFAQKRSLTLPVYTCERDGPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAV 275
           +YKNQLQ  AQ+   +LP YTC R+GP HA RF+  V  +G+ +ESP +  TL+ AE++ 
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 276 AKVALMSLCQDGAQQ--------DSGLYKNLLQEMAQKRGLGLPTYSTLQSGEVHVPIFV 335
           A+VAL +L   G  +        ++G+YKNLLQE A + GL LP Y++++SG  H+P F 
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 336 STVKIGEETFEGERLRTKKQAEMSAAKVAYITLKE 363
            TV++   +F GE  +TKKQAE +AA  A+ +L++
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRK 155

[Close]

BLAST of Tan0011575 vs. ExPASy Swiss-Prot
Match: Q9SKN2 (Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.8e-31
Identity = 96/288 (33.33%), Postives = 152/288 (52.78%), Query Frame = 0


Query: 216 LYKNQLQNFAQKRSLTLPVYTCERDGPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAV 275
           +YKNQLQ  AQ+    LP YTC R+GP HA RF+  V  +G+ +ESP++  TL+ AE++ 
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 276 AKVALMSLCQDGAQ--------QDSGLYKNLLQEMAQKRGLGLPTYSTLQSGEVHVPIFV 335
           A+VAL +L   G           ++G+YKNLLQE+AQ+ G  LP Y+T +SG  H P+F 
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 336 STVKIGEETFEGERLRTKKQAEMSAAKVAYITLKEGKSSKNPLIASQVVSSSLQSDVITD 395
            TV++   TF G+  + KKQAE +AA  A+ +LK+        +A +  SS  + + I +
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQ--------LAKETSSSMPEPENIDE 180

Query: 396 LEPQVSSDLVISHPSMTIEKRPNDGGSQSISTRKRAPSSCDLGYEVPRETNDYVLNLVSK 455
           LE  + +  +I++    I++    G S S      AP      + +        L   S 
Sbjct: 181 LEQVIIARALINY---RIKENIGTGSSSS------APVPFAKKFFMQN------LRPTSP 240

Query: 456 LEAGKSSSSKRVFVCPRQPNMTFPKDSTVLPISDDQWVAFSLSTEGSQ 496
             +  ++S    F+CP+QP+ +  + S       D+ +A +L +   Q
Sbjct: 241 QPSPATTSRILPFICPKQPSRS-SRSSLAATSGIDRIMAAALESRSYQ 264

[Close]

BLAST of Tan0011575 vs. NCBI nr
Match: XP_038904852.1 (double-stranded RNA-binding protein 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 711.1 bits (1834), Expect = 6.8e-201
Identity = 383/509 (75.25%), Postives = 418/509 (82.12%), Query Frame = 0


Query: 1   MFKTKLQELCHRKLYKLPEYSVVKQGQDHDPRFEATVTVDGREFHSQATCKSSKQAQNDA 60
           MFKT+LQELCHRK Y+LPEYSVVKQGQDHDPRFEATVTVDG++F S   CKSSKQAQN+A
Sbjct: 1   MFKTQLQELCHRKSYQLPEYSVVKQGQDHDPRFEATVTVDGKQFSSLVPCKSSKQAQNEA 60

Query: 61  AKLAFDFFSLPSSPSCPPPQPQPHPPPQPEQRLPQPFFPVPSLPPTQLHCIPQFPHPSLH 120
           AK+AFDFFSLPSS         P PP QP+   PQP  P  S PP  + CIP F H SL 
Sbjct: 61  AKIAFDFFSLPSS---------PQPPLQPDHSCPQPLLPESSPPPKLIPCIPPFSHSSLD 120

Query: 121 ISSFPQPSLPSQLGTFVSITNQDNKLSSPLRPEVRLEVANESSELEESSKDSSIMSNMDV 180
           +SSFPQP+LPS LG+  +ITN DN ++SPLRPEV LEVANES ELE+S KDSSIMSNMDV
Sbjct: 121 VSSFPQPTLPSHLGSIGAITNLDNTVTSPLRPEVTLEVANESFELEKSPKDSSIMSNMDV 180

Query: 181 KFAAQSVQPKIQNTDKSPVVEDIDKECTKLTGMQHLYKNQLQNFAQKRSLTLPVYTCERD 240
           KFAAQ V+PKIQNTDKSPVVED DKEC KLTGMQHLYKN+LQN AQKR L+LP+YTCERD
Sbjct: 181 KFAAQLVEPKIQNTDKSPVVEDFDKECLKLTGMQHLYKNKLQNLAQKRGLSLPMYTCERD 240

Query: 241 GPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAVAKVALMSLCQDGAQQDSGLYKNLLQ 300
           GPPHASRFRCKVEIDGKTYESPEF  TLKDAENAVAKVAL+SLCQDGAQ+DSGLYKNLLQ
Sbjct: 241 GPPHASRFRCKVEIDGKTYESPEFHGTLKDAENAVAKVALLSLCQDGAQEDSGLYKNLLQ 300

Query: 301 EMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKIGEETFEGERLRTKKQAEMSAAKVAYITL 360
           EMAQKRGLGLP YST QSGEVHVP+FVSTVK+GEET EG+  RTKKQAEMSAAKVAY T+
Sbjct: 301 EMAQKRGLGLPIYSTSQSGEVHVPVFVSTVKVGEETSEGKPSRTKKQAEMSAAKVAYFTI 360

Query: 361 KEGKSSKNPLIASQVVSSSLQSDVITDLEPQVSSDLVISHPSMTIEKRPNDGGSQSISTR 420
           KEGK +      SQ +SSSLQS+V TD + QV S  VISHPSM+IEK+PNDGGSQSISTR
Sbjct: 361 KEGKIASPRERDSQAISSSLQSNVSTDQDLQVISSPVISHPSMSIEKQPNDGGSQSISTR 420

Query: 421 KRAPSSCDLGYEVPR-------------ETNDYVLN-LVSKLEAGKSSSSKRVFVCPRQP 480
           KRAP SCDLG E  R             E+NDYV N LVSKLEAGKSSSSKRV VCPRQP
Sbjct: 421 KRAP-SCDLGIEASRDIAISSHNVAHLGESNDYVSNLLVSKLEAGKSSSSKRVIVCPRQP 480

Query: 481 NMTFPKDSTVLPISDDQWVAFSLSTEGSQ 496
           NMTFPK +TVLPISDD+WV FS+ T  SQ
Sbjct: 481 NMTFPKGTTVLPISDDEWVTFSVETGTSQ 499

[Close]

BLAST of Tan0011575 vs. NCBI nr
Match: XP_023527472.1 (double-stranded RNA-binding protein 4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 704.1 bits (1816), Expect = 8.4e-199
Identity = 382/511 (74.76%), Postives = 414/511 (81.02%), Query Frame = 0


Query: 1   MFKTKLQELCHRKLYKLPEYSVVKQGQDHDPRFEATVTVDGREFHSQATCKSSKQAQNDA 60
           MFKTKLQELCHRK Y+LP YSVVKQGQDHDPRFEATVTV G +F SQ  CKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYELPVYSVVKQGQDHDPRFEATVTVAGNKFCSQTPCKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSSPSCPPPQPQPHPPPQPEQRLPQPFFPVPSLPPTQLHCIPQFPHPSLH 120
           AKLAFDFFSLPSSP   P  PQP              FP  S P  QL   PQF HPSLH
Sbjct: 61  AKLAFDFFSLPSSPKLQPYHPQPS-------------FPESSPPMEQLRYSPQFSHPSLH 120

Query: 121 ISSFPQPSLPSQLGTFVSITNQDNKLSSPLRPEVRLEVANESSELEESSKDSSIMSNMDV 180
           ISSFPQPSLPSQ  TF + TN DN +S PLRP ++LEVANE SEL ES+KDSSI SNMDV
Sbjct: 121 ISSFPQPSLPSQSDTFGATTNLDNTVSYPLRP-LKLEVANECSELVESTKDSSITSNMDV 180

Query: 181 KFAAQSVQPKIQNTDKSPVVEDIDKECTKLTGMQHLYKNQLQNFAQKRSLTLPVYTCERD 240
           KF+AQSV+PKIQNTDKSPVV+  DKEC+KLTGMQHLYKN+LQNFAQK++LTLPVYTCERD
Sbjct: 181 KFSAQSVEPKIQNTDKSPVVDYFDKECSKLTGMQHLYKNKLQNFAQKKNLTLPVYTCERD 240

Query: 241 GPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAVAKVALMSLCQDGAQQDSGLYKNLLQ 300
           GPPHASRFRCKVEIDGKTYESPEF  TLKDAENAVAKVAL+S CQDG Q+DSGLYKNLLQ
Sbjct: 241 GPPHASRFRCKVEIDGKTYESPEFHATLKDAENAVAKVALLSSCQDGVQEDSGLYKNLLQ 300

Query: 301 EMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKIGEETFEGERLRTKKQAEMSAAKVAYITL 360
           EMAQK+GLGLP YST QSGE+HVP+FVSTVKIGE  FEGE+ RTKKQAEMSAAK AYI++
Sbjct: 301 EMAQKKGLGLPAYSTSQSGEIHVPVFVSTVKIGEANFEGEQSRTKKQAEMSAAKAAYISI 360

Query: 361 KEGKSSKNP---LIASQVVSSSLQSDVITDLEPQVSSDLVISHPSMTIEKRPNDGGSQSI 420
           KEGKSS        + Q +S  LQS V TDLE QV S  VISHP+   EK+PNDGGSQSI
Sbjct: 361 KEGKSSSTSPRGRASPQGISCRLQSSVSTDLELQVRSSPVISHPA--FEKQPNDGGSQSI 420

Query: 421 STRKRAPSSCDLGYEVPRE-------------TNDYVLNLVSKLEAGKSSSSKRVFVCPR 480
           STRKRAPSSCD+ +EV R+             TNDYVLNLVSKLEAGKSSSSKRV VCPR
Sbjct: 421 STRKRAPSSCDIDHEVSRDIAISSRNVAQPGNTNDYVLNLVSKLEAGKSSSSKRVIVCPR 480

Query: 481 QPNMTFPKDSTVLPISDDQWVAFSLSTEGSQ 496
           QPNMTFPKD TVLP+SDDQWVAFSLST+ +Q
Sbjct: 481 QPNMTFPKDITVLPVSDDQWVAFSLSTKANQ 495

[Close]

BLAST of Tan0011575 vs. NCBI nr
Match: XP_022980601.1 (double-stranded RNA-binding protein 4-like isoform X1 [Cucurbita maxima] >XP_022980602.1 double-stranded RNA-binding protein 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 701.0 bits (1808), Expect = 7.1e-198
Identity = 384/516 (74.42%), Postives = 416/516 (80.62%), Query Frame = 0


Query: 1   MFKTKLQELCHRKLYKLPEYSVVKQGQDHDPRFEATVTVDGREFHSQATCKSSKQAQNDA 60
           MFKTKLQELCHRK Y+LP YSVVKQGQDHDPRFEATVTV G +F SQ  CKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYELPVYSVVKQGQDHDPRFEATVTVAGNKFCSQTPCKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSSPSCPPPQPQPHPPPQPEQRLPQPFFPVPSLPPTQLHCIPQFPHPSLH 120
           AKLAFDFFSLPSSP   P  PQP              FP  S P  QL   PQF HPSLH
Sbjct: 61  AKLAFDFFSLPSSPKLEPYHPQPS-------------FPESSPPLEQLRYSPQFSHPSLH 120

Query: 121 ISSFPQPSLPSQLGTFVSITNQDNKLSSPLRPEVRLEVANESSELEESSKDSSIMSNMDV 180
           ISSFPQPSLPSQ  TF + TN DN +S P RP V+LEVANESS L ES+KDSSI SNM V
Sbjct: 121 ISSFPQPSLPSQSDTFGATTNLDNTVSYPQRP-VKLEVANESSGLVESTKDSSITSNMGV 180

Query: 181 KFAAQSVQPKIQNTDKSPVVEDIDKECTKLTGMQHLYKNQLQNFAQKRSLTLPVYTCERD 240
           KF+AQSV+PKIQNTDKSPVV+  DKEC+KLTGM+HLYKN+LQNFAQK++LTLPVYTCERD
Sbjct: 181 KFSAQSVEPKIQNTDKSPVVDYFDKECSKLTGMEHLYKNKLQNFAQKKNLTLPVYTCERD 240

Query: 241 GPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAVAKVALMSLCQDGAQQDSGLYKNLLQ 300
           GPPHASRFRCKVEIDGKTYESPEF  TLKDAENAVAKVAL+S CQDG Q+DSGLYKNLLQ
Sbjct: 241 GPPHASRFRCKVEIDGKTYESPEFHATLKDAENAVAKVALLSSCQDGVQEDSGLYKNLLQ 300

Query: 301 EMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKIGEETFEGERLRTKKQAEMSAAKVAYITL 360
           EMAQK+GLGLP YST QSGE+HVP+FVSTVKIGE  FEGE+ RTKKQAEMSAAK AY+++
Sbjct: 301 EMAQKKGLGLPVYSTSQSGEIHVPVFVSTVKIGEANFEGEQSRTKKQAEMSAAKAAYMSI 360

Query: 361 KEGKSSK-NPLIAS-------QVVSSSLQSDVITDLEPQVSSDLVISHPSMTIEKRPNDG 420
           KEGKSS  NP IAS       Q +  SLQS V TDLE QV S  VISHP+   EK+PNDG
Sbjct: 361 KEGKSSSTNPSIASPRGRASPQGIPCSLQSSVSTDLELQVRSSPVISHPA--FEKQPNDG 420

Query: 421 GSQSISTRKRAPSSCDLGYEVPRE-------------TNDYVLNLVSKLEAGKSSSSKRV 480
           GSQSISTRKRAPSSCD+ +EV R+             TNDYVLNLVSKLEAGKSSSSKRV
Sbjct: 421 GSQSISTRKRAPSSCDIDHEVSRDIAISSRNVAQPGNTNDYVLNLVSKLEAGKSSSSKRV 480

Query: 481 FVCPRQPNMTFPKDSTVLPISDDQWVAFSLSTEGSQ 496
            VCPRQPNMTFPKD TVLP+SDDQWVAFSLST+ +Q
Sbjct: 481 IVCPRQPNMTFPKDITVLPVSDDQWVAFSLSTKANQ 500

[Close]

BLAST of Tan0011575 vs. NCBI nr
Match: KAG6581661.1 (Double-stranded RNA-binding protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 699.9 bits (1805), Expect = 1.6e-197
Identity = 380/511 (74.36%), Postives = 412/511 (80.63%), Query Frame = 0


Query: 1   MFKTKLQELCHRKLYKLPEYSVVKQGQDHDPRFEATVTVDGREFHSQATCKSSKQAQNDA 60
           MFKTKLQELCHRK Y+LP YSVVKQGQDHDPRFEATVTV G +F SQ  CKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYELPVYSVVKQGQDHDPRFEATVTVAGNKFCSQTPCKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSSPSCPPPQPQPHPPPQPEQRLPQPFFPVPSLPPTQLHCIPQFPHPSLH 120
           AKLAFDFFSLPSSP   P  PQP              FP  S P  QL   PQF HPSLH
Sbjct: 61  AKLAFDFFSLPSSPKLEPFHPQPS-------------FPESSPPLEQLRYSPQFSHPSLH 120

Query: 121 ISSFPQPSLPSQLGTFVSITNQDNKLSSPLRPEVRLEVANESSELEESSKDSSIMSNMDV 180
           IS+FPQPSLPSQ  TF + TN DN +S PLRPE +LEVANE SEL ES+KDSSI SNMDV
Sbjct: 121 ISAFPQPSLPSQSDTFGATTNLDNTVSYPLRPE-KLEVANECSELVESTKDSSITSNMDV 180

Query: 181 KFAAQSVQPKIQNTDKSPVVEDIDKECTKLTGMQHLYKNQLQNFAQKRSLTLPVYTCERD 240
           KF+AQSV+PKIQNTDKSPVV+  DKEC+KLTGMQHLYKN+LQNFAQK++LTLPVYTCERD
Sbjct: 181 KFSAQSVEPKIQNTDKSPVVDYFDKECSKLTGMQHLYKNKLQNFAQKKNLTLPVYTCERD 240

Query: 241 GPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAVAKVALMSLCQDGAQQDSGLYKNLLQ 300
           GPPHASRFRCKVEIDGKTYESPEF  TLKDAENAVAKVAL+S CQDG Q+DSGLYKNLLQ
Sbjct: 241 GPPHASRFRCKVEIDGKTYESPEFHATLKDAENAVAKVALLSSCQDGVQEDSGLYKNLLQ 300

Query: 301 EMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKIGEETFEGERLRTKKQAEMSAAKVAYITL 360
           EMAQK+GLGLP YST QSGE+HVP+FVSTVKIGE  FEGE+ RTKKQAEMSAAK AYI++
Sbjct: 301 EMAQKKGLGLPAYSTSQSGEIHVPVFVSTVKIGEANFEGEQSRTKKQAEMSAAKAAYISI 360

Query: 361 KEGKSSKNP---LIASQVVSSSLQSDVITDLEPQVSSDLVISHPSMTIEKRPNDGGSQSI 420
           KEGKSS        + Q +S  LQS V TDLE QV S  VISHP+   EK+PNDGGSQSI
Sbjct: 361 KEGKSSSTSPRGRASPQGISCRLQSSVSTDLELQVRSSPVISHPA--FEKQPNDGGSQSI 420

Query: 421 STRKRAPSSCDLGYEV-------------PRETNDYVLNLVSKLEAGKSSSSKRVFVCPR 480
           STRKRAPSSCD+ + +             P  TNDYVLNLVSKLEAGKSSSSKRV VCPR
Sbjct: 421 STRKRAPSSCDIDHGICRDIAISSRNVAQPGNTNDYVLNLVSKLEAGKSSSSKRVIVCPR 480

Query: 481 QPNMTFPKDSTVLPISDDQWVAFSLSTEGSQ 496
           QPNMTFPKD TVLP+SDDQWVAFSLST+ +Q
Sbjct: 481 QPNMTFPKDITVLPVSDDQWVAFSLSTKANQ 495

[Close]

BLAST of Tan0011575 vs. NCBI nr
Match: XP_022930583.1 (double-stranded RNA-binding protein 1-like [Cucurbita moschata] >XP_022930584.1 double-stranded RNA-binding protein 1-like [Cucurbita moschata])

HSP 1 Score: 698.7 bits (1802), Expect = 3.5e-197
Identity = 381/511 (74.56%), Postives = 412/511 (80.63%), Query Frame = 0


Query: 1   MFKTKLQELCHRKLYKLPEYSVVKQGQDHDPRFEATVTVDGREFHSQATCKSSKQAQNDA 60
           MFKTKLQELCHRK Y+LP YSVVKQGQDHDPRFEATVTV G +F SQ  CKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYELPVYSVVKQGQDHDPRFEATVTVAGNKFCSQTPCKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSSPSCPPPQPQPHPPPQPEQRLPQPFFPVPSLPPTQLHCIPQFPHPSLH 120
           AKLAFDFFSLPSSP   P  PQP              FP  S P  QL   PQF HPSLH
Sbjct: 61  AKLAFDFFSLPSSPKLEPFHPQPS-------------FPESSPPLEQLRYSPQFSHPSLH 120

Query: 121 ISSFPQPSLPSQLGTFVSITNQDNKLSSPLRPEVRLEVANESSELEESSKDSSIMSNMDV 180
           ISSFPQPSLPSQ  TF + +N DN +S PLRPE +LEVANE SEL ES+KDSSI SNMDV
Sbjct: 121 ISSFPQPSLPSQSDTFGATSNLDNPVSYPLRPE-KLEVANECSELVESTKDSSITSNMDV 180

Query: 181 KFAAQSVQPKIQNTDKSPVVEDIDKECTKLTGMQHLYKNQLQNFAQKRSLTLPVYTCERD 240
           KF+AQSV+PKIQNTDKSPVV+  DKEC+KLTGMQHLYKN+LQNFAQK++LTLPVYTCERD
Sbjct: 181 KFSAQSVEPKIQNTDKSPVVDYFDKECSKLTGMQHLYKNKLQNFAQKKNLTLPVYTCERD 240

Query: 241 GPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAVAKVALMSLCQDGAQQDSGLYKNLLQ 300
           GPPHASRFR KVEIDGKTYESPEF  TLKDAENAVAKVAL+S CQDG Q+DSGLYKNLLQ
Sbjct: 241 GPPHASRFRSKVEIDGKTYESPEFHATLKDAENAVAKVALLSSCQDGVQEDSGLYKNLLQ 300

Query: 301 EMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKIGEETFEGERLRTKKQAEMSAAKVAYITL 360
           EMAQK+GLGLP YST QSGE+HVP+FVSTVKIGE  FEGE+ RTKKQAEMSAAK AYI++
Sbjct: 301 EMAQKKGLGLPAYSTSQSGEIHVPVFVSTVKIGEANFEGEQSRTKKQAEMSAAKAAYISI 360

Query: 361 KEGKSSKNP---LIASQVVSSSLQSDVITDLEPQVSSDLVISHPSMTIEKRPNDGGSQSI 420
           KEGKSS        + Q +S  LQS V TDLE QV S  VISHP+   EK+PNDGGSQSI
Sbjct: 361 KEGKSSSTSPRGRASPQGISCRLQSSVSTDLELQVRSSPVISHPA--FEKQPNDGGSQSI 420

Query: 421 STRKRAPSSCDLGYEV-------------PRETNDYVLNLVSKLEAGKSSSSKRVFVCPR 480
           STRKRAPSSCD+ +EV             P  TNDYVLNLVSKLEAGKSSSSKRV VCPR
Sbjct: 421 STRKRAPSSCDIDHEVCRDIAISSRNVAQPGNTNDYVLNLVSKLEAGKSSSSKRVIVCPR 480

Query: 481 QPNMTFPKDSTVLPISDDQWVAFSLSTEGSQ 496
           QPNMTFPKD TVLP+SDDQWVAFSLST+ +Q
Sbjct: 481 QPNMTFPKDITVLPVSDDQWVAFSLSTKANQ 495

[Close]

BLAST of Tan0011575 vs. ExPASy TrEMBL
Match: A0A6J1IRS0 (double-stranded RNA-binding protein 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479924 PE=4 SV=1)

HSP 1 Score: 701.0 bits (1808), Expect = 3.4e-198
Identity = 384/516 (74.42%), Postives = 416/516 (80.62%), Query Frame = 0


Query: 1   MFKTKLQELCHRKLYKLPEYSVVKQGQDHDPRFEATVTVDGREFHSQATCKSSKQAQNDA 60
           MFKTKLQELCHRK Y+LP YSVVKQGQDHDPRFEATVTV G +F SQ  CKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYELPVYSVVKQGQDHDPRFEATVTVAGNKFCSQTPCKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSSPSCPPPQPQPHPPPQPEQRLPQPFFPVPSLPPTQLHCIPQFPHPSLH 120
           AKLAFDFFSLPSSP   P  PQP              FP  S P  QL   PQF HPSLH
Sbjct: 61  AKLAFDFFSLPSSPKLEPYHPQPS-------------FPESSPPLEQLRYSPQFSHPSLH 120

Query: 121 ISSFPQPSLPSQLGTFVSITNQDNKLSSPLRPEVRLEVANESSELEESSKDSSIMSNMDV 180
           ISSFPQPSLPSQ  TF + TN DN +S P RP V+LEVANESS L ES+KDSSI SNM V
Sbjct: 121 ISSFPQPSLPSQSDTFGATTNLDNTVSYPQRP-VKLEVANESSGLVESTKDSSITSNMGV 180

Query: 181 KFAAQSVQPKIQNTDKSPVVEDIDKECTKLTGMQHLYKNQLQNFAQKRSLTLPVYTCERD 240
           KF+AQSV+PKIQNTDKSPVV+  DKEC+KLTGM+HLYKN+LQNFAQK++LTLPVYTCERD
Sbjct: 181 KFSAQSVEPKIQNTDKSPVVDYFDKECSKLTGMEHLYKNKLQNFAQKKNLTLPVYTCERD 240

Query: 241 GPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAVAKVALMSLCQDGAQQDSGLYKNLLQ 300
           GPPHASRFRCKVEIDGKTYESPEF  TLKDAENAVAKVAL+S CQDG Q+DSGLYKNLLQ
Sbjct: 241 GPPHASRFRCKVEIDGKTYESPEFHATLKDAENAVAKVALLSSCQDGVQEDSGLYKNLLQ 300

Query: 301 EMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKIGEETFEGERLRTKKQAEMSAAKVAYITL 360
           EMAQK+GLGLP YST QSGE+HVP+FVSTVKIGE  FEGE+ RTKKQAEMSAAK AY+++
Sbjct: 301 EMAQKKGLGLPVYSTSQSGEIHVPVFVSTVKIGEANFEGEQSRTKKQAEMSAAKAAYMSI 360

Query: 361 KEGKSSK-NPLIAS-------QVVSSSLQSDVITDLEPQVSSDLVISHPSMTIEKRPNDG 420
           KEGKSS  NP IAS       Q +  SLQS V TDLE QV S  VISHP+   EK+PNDG
Sbjct: 361 KEGKSSSTNPSIASPRGRASPQGIPCSLQSSVSTDLELQVRSSPVISHPA--FEKQPNDG 420

Query: 421 GSQSISTRKRAPSSCDLGYEVPRE-------------TNDYVLNLVSKLEAGKSSSSKRV 480
           GSQSISTRKRAPSSCD+ +EV R+             TNDYVLNLVSKLEAGKSSSSKRV
Sbjct: 421 GSQSISTRKRAPSSCDIDHEVSRDIAISSRNVAQPGNTNDYVLNLVSKLEAGKSSSSKRV 480

Query: 481 FVCPRQPNMTFPKDSTVLPISDDQWVAFSLSTEGSQ 496
            VCPRQPNMTFPKD TVLP+SDDQWVAFSLST+ +Q
Sbjct: 481 IVCPRQPNMTFPKDITVLPVSDDQWVAFSLSTKANQ 500

[Close]

BLAST of Tan0011575 vs. ExPASy TrEMBL
Match: A0A6J1EVN0 (double-stranded RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436989 PE=4 SV=1)

HSP 1 Score: 698.7 bits (1802), Expect = 1.7e-197
Identity = 381/511 (74.56%), Postives = 412/511 (80.63%), Query Frame = 0


Query: 1   MFKTKLQELCHRKLYKLPEYSVVKQGQDHDPRFEATVTVDGREFHSQATCKSSKQAQNDA 60
           MFKTKLQELCHRK Y+LP YSVVKQGQDHDPRFEATVTV G +F SQ  CKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYELPVYSVVKQGQDHDPRFEATVTVAGNKFCSQTPCKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSSPSCPPPQPQPHPPPQPEQRLPQPFFPVPSLPPTQLHCIPQFPHPSLH 120
           AKLAFDFFSLPSSP   P  PQP              FP  S P  QL   PQF HPSLH
Sbjct: 61  AKLAFDFFSLPSSPKLEPFHPQPS-------------FPESSPPLEQLRYSPQFSHPSLH 120

Query: 121 ISSFPQPSLPSQLGTFVSITNQDNKLSSPLRPEVRLEVANESSELEESSKDSSIMSNMDV 180
           ISSFPQPSLPSQ  TF + +N DN +S PLRPE +LEVANE SEL ES+KDSSI SNMDV
Sbjct: 121 ISSFPQPSLPSQSDTFGATSNLDNPVSYPLRPE-KLEVANECSELVESTKDSSITSNMDV 180

Query: 181 KFAAQSVQPKIQNTDKSPVVEDIDKECTKLTGMQHLYKNQLQNFAQKRSLTLPVYTCERD 240
           KF+AQSV+PKIQNTDKSPVV+  DKEC+KLTGMQHLYKN+LQNFAQK++LTLPVYTCERD
Sbjct: 181 KFSAQSVEPKIQNTDKSPVVDYFDKECSKLTGMQHLYKNKLQNFAQKKNLTLPVYTCERD 240

Query: 241 GPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAVAKVALMSLCQDGAQQDSGLYKNLLQ 300
           GPPHASRFR KVEIDGKTYESPEF  TLKDAENAVAKVAL+S CQDG Q+DSGLYKNLLQ
Sbjct: 241 GPPHASRFRSKVEIDGKTYESPEFHATLKDAENAVAKVALLSSCQDGVQEDSGLYKNLLQ 300

Query: 301 EMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKIGEETFEGERLRTKKQAEMSAAKVAYITL 360
           EMAQK+GLGLP YST QSGE+HVP+FVSTVKIGE  FEGE+ RTKKQAEMSAAK AYI++
Sbjct: 301 EMAQKKGLGLPAYSTSQSGEIHVPVFVSTVKIGEANFEGEQSRTKKQAEMSAAKAAYISI 360

Query: 361 KEGKSSKNP---LIASQVVSSSLQSDVITDLEPQVSSDLVISHPSMTIEKRPNDGGSQSI 420
           KEGKSS        + Q +S  LQS V TDLE QV S  VISHP+   EK+PNDGGSQSI
Sbjct: 361 KEGKSSSTSPRGRASPQGISCRLQSSVSTDLELQVRSSPVISHPA--FEKQPNDGGSQSI 420

Query: 421 STRKRAPSSCDLGYEV-------------PRETNDYVLNLVSKLEAGKSSSSKRVFVCPR 480
           STRKRAPSSCD+ +EV             P  TNDYVLNLVSKLEAGKSSSSKRV VCPR
Sbjct: 421 STRKRAPSSCDIDHEVCRDIAISSRNVAQPGNTNDYVLNLVSKLEAGKSSSSKRVIVCPR 480

Query: 481 QPNMTFPKDSTVLPISDDQWVAFSLSTEGSQ 496
           QPNMTFPKD TVLP+SDDQWVAFSLST+ +Q
Sbjct: 481 QPNMTFPKDITVLPVSDDQWVAFSLSTKANQ 495

[Close]

BLAST of Tan0011575 vs. ExPASy TrEMBL
Match: A0A6J1D6X0 (double-stranded RNA-binding protein 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017818 PE=4 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 2.4e-191
Identity = 375/519 (72.25%), Postives = 424/519 (81.70%), Query Frame = 0


Query: 1   MFKTKLQELCHRKLYKLPEYSVVKQGQDHDPRFEATVTVDGREFHSQATCKSSKQAQNDA 60
           M+K+KLQELCHRK  KLPEYSV KQGQDHDPRFEA VTV+ +EF SQ  CKSSKQAQN+A
Sbjct: 1   MYKSKLQELCHRKSCKLPEYSVFKQGQDHDPRFEAIVTVNDKEFRSQTPCKSSKQAQNEA 60

Query: 61  AKLAFDFFSLPSSPSCPPPQP------QPHPPPQPEQRLPQPFFPVPSLPPTQLHCIPQF 120
           AKLAFDFFSLPSSPSCP PQP      QP PP QP+Q  PQP FP+ S PP QLHCI QF
Sbjct: 61  AKLAFDFFSLPSSPSCPQPQPQPQPQLQPQPPLQPKQHRPQPLFPMSSPPPEQLHCISQF 120

Query: 121 PHPSLHISSFPQPSLPSQLGTFVSITNQDNKLSSPLRPEVRLEVANESSELEESSKDSSI 180
           P PSL ISSFPQPSLPS LGTF + T  D+KLSSP RPE +LEVANE+SE+EES+KDSS+
Sbjct: 121 PQPSLSISSFPQPSLPSHLGTFDARTKLDDKLSSPWRPEAKLEVANETSEIEESTKDSSV 180

Query: 181 MS-NMDVKFAA-QSVQPKIQNTDKSPVVEDIDKECTKLTGMQHLYKNQLQNFAQKRSLTL 240
           M+ N D+K    +SVQP +Q+T++SPV +DIDK  TKLTGMQHL+KNQLQNFAQKR+LTL
Sbjct: 181 MNYNTDIKCTTEESVQPNVQDTNQSPVDDDIDKGFTKLTGMQHLHKNQLQNFAQKRNLTL 240

Query: 241 PVYTCERDGPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAVAKVALMSLCQDGAQQDS 300
           P+YTCERDGPPHASRFRCKVEI G+TYES E   TLKDAENAVAKVAL+S CQDGAQ++ 
Sbjct: 241 PIYTCERDGPPHASRFRCKVEIGGRTYESSELFATLKDAENAVAKVALLS-CQDGAQENP 300

Query: 301 GLYKNLLQEMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKIGEETFEGERLRTKKQAEMSA 360
           GLYKN LQEMAQKRGLGLP YSTLQSGEVH PIFVS VK+GEETFEG++ RTKKQAEMSA
Sbjct: 301 GLYKNFLQEMAQKRGLGLPAYSTLQSGEVHAPIFVSIVKVGEETFEGQQSRTKKQAEMSA 360

Query: 361 AKVAYITLKEGKSSKNPLIAS--------QVVSSSLQSDVITDLEPQVSSDLVISHPSMT 420
           AKVAYI+LKEG   KN LIAS        +VVSSS QS+V T++E      LV S PS  
Sbjct: 361 AKVAYISLKEG---KNHLIASPGGQASQVEVVSSSSQSNVSTNME------LVRSSPS-- 420

Query: 421 IEKRPNDGGSQSISTRKRAPSSCDLG--------YEVPRETNDYVLNLVSKLEAGKSSSS 480
           IEK+PNDGG  SISTRKRAP SCDLG        ++VP E+N+YVLNL+SKLEAGKSSSS
Sbjct: 421 IEKQPNDGGPCSISTRKRAP-SCDLGSEVQNVAQHDVPSESNNYVLNLISKLEAGKSSSS 480

Query: 481 KRVFVCPRQPNMTFPKDSTVLPISDDQWVAFSLSTEGSQ 496
           KR+FVCPR+PNM FP+DST+L +SDD+WVAFSLS E SQ
Sbjct: 481 KRIFVCPREPNMKFPQDSTILSMSDDKWVAFSLSNEASQ 506

[Close]

BLAST of Tan0011575 vs. ExPASy TrEMBL
Match: A0A6J1D5K6 (double-stranded RNA-binding protein 1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017818 PE=4 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 4.5e-190
Identity = 369/511 (72.21%), Postives = 419/511 (82.00%), Query Frame = 0


Query: 1   MFKTKLQELCHRKLYKLPEYSVVKQGQDHDPRFEATVTVDGREFHSQATCKSSKQAQNDA 60
           M+K+KLQELCHRK  KLPEYSV KQGQDHDPRFEA VTV+ +EF SQ  CKSSKQAQN+A
Sbjct: 1   MYKSKLQELCHRKSCKLPEYSVFKQGQDHDPRFEAIVTVNDKEFRSQTPCKSSKQAQNEA 60

Query: 61  AKLAFDFFSLPSSPSCPPPQP------QPHPPPQPEQRLPQPFFPVPSLPPTQLHCIPQF 120
           AKLAFDFFSLPSSPSCP PQP      QP PP QP+Q  PQP FP+ S PP QLHCI QF
Sbjct: 61  AKLAFDFFSLPSSPSCPQPQPQPQPQLQPQPPLQPKQHRPQPLFPMSSPPPEQLHCISQF 120

Query: 121 PHPSLHISSFPQPSLPSQLGTFVSITNQDNKLSSPLRPEVRLEVANESSELEESSKDSSI 180
           P PSL ISSFPQPSLPS LGTF + T  D+KLSSP RPE +LEVANE+SE+EES+KDSS+
Sbjct: 121 PQPSLSISSFPQPSLPSHLGTFDARTKLDDKLSSPWRPEAKLEVANETSEIEESTKDSSV 180

Query: 181 MS-NMDVKFAA-QSVQPKIQNTDKSPVVEDIDKECTKLTGMQHLYKNQLQNFAQKRSLTL 240
           M+ N D+K    +SVQP +Q+T++SPV +DIDK  TKLTGMQHL+KNQLQNFAQKR+LTL
Sbjct: 181 MNYNTDIKCTTEESVQPNVQDTNQSPVDDDIDKGFTKLTGMQHLHKNQLQNFAQKRNLTL 240

Query: 241 PVYTCERDGPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAVAKVALMSLCQDGAQQDS 300
           P+YTCERDGPPHASRFRCKVEI G+TYES E   TLKDAENAVAKVAL+S CQDGAQ++ 
Sbjct: 241 PIYTCERDGPPHASRFRCKVEIGGRTYESSELFATLKDAENAVAKVALLS-CQDGAQENP 300

Query: 301 GLYKNLLQEMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKIGEETFEGERLRTKKQAEMSA 360
           GLYKN LQEMAQKRGLGLP YSTLQSGEVH PIFVS VK+GEETFEG++ RTKKQAEMSA
Sbjct: 301 GLYKNFLQEMAQKRGLGLPAYSTLQSGEVHAPIFVSIVKVGEETFEGQQSRTKKQAEMSA 360

Query: 361 AKVAYITLKEGKSSKNPLIASQVVSSSLQSDVITDLEPQVSSDLVISHPSMTIEKRPNDG 420
           AKVAYI+LKEG  +       +VVSSS QS+V T++E      LV S PS  IEK+PNDG
Sbjct: 361 AKVAYISLKEGGQASQ----VEVVSSSSQSNVSTNME------LVRSSPS--IEKQPNDG 420

Query: 421 GSQSISTRKRAPSSCDLG--------YEVPRETNDYVLNLVSKLEAGKSSSSKRVFVCPR 480
           G  SISTRKRAP SCDLG        ++VP E+N+YVLNL+SKLEAGKSSSSKR+FVCPR
Sbjct: 421 GPCSISTRKRAP-SCDLGSEVQNVAQHDVPSESNNYVLNLISKLEAGKSSSSKRIFVCPR 480

Query: 481 QPNMTFPKDSTVLPISDDQWVAFSLSTEGSQ 496
           +PNM FP+DST+L +SDD+WVAFSLS E SQ
Sbjct: 481 EPNMKFPQDSTILSMSDDKWVAFSLSNEASQ 497

[Close]

BLAST of Tan0011575 vs. ExPASy TrEMBL
Match: A0A6J1IZS6 (double-stranded RNA-binding protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479924 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 2.1e-179
Identity = 351/508 (69.09%), Postives = 380/508 (74.80%), Query Frame = 0


Query: 1   MFKTKLQELCHRKLYKLPEYSVVKQGQDHDPRFEATVTVDGREFHSQATCKSSKQAQNDA 60
           MFKTKLQELCHRK Y+LP YSVVKQGQDHDPRFEATVTV G +F SQ  CKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYELPVYSVVKQGQDHDPRFEATVTVAGNKFCSQTPCKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSSPSCPPPQPQPHPPPQPEQRLPQPFFPVPSLPPTQLHCIPQFPHPSLH 120
           AKLAFDFFSLPSSP   P  PQP              FP  S P  QL   PQF HPSLH
Sbjct: 61  AKLAFDFFSLPSSPKLEPYHPQPS-------------FPESSPPLEQLRYSPQFSHPSLH 120

Query: 121 ISSFPQPSLPSQLGTFVSITNQDNKLSSPLRPEVRLEVANESSELEESSKDSSIMSNMDV 180
           ISSFPQPSLPSQ  TF + TN DN +S P RP V+LEVANESS L ES+KDSSI SNM V
Sbjct: 121 ISSFPQPSLPSQSDTFGATTNLDNTVSYPQRP-VKLEVANESSGLVESTKDSSITSNMGV 180

Query: 181 KFAAQSVQPKIQNTDKSPVVEDIDKECTKLTGMQHLYKNQLQNFAQKRSLTLPVYTCERD 240
           KF+AQSV+PKIQNTDKSPVV+  DKEC+KLTGM+HLYKN+LQNFAQK++LTLPVYTCERD
Sbjct: 181 KFSAQSVEPKIQNTDKSPVVDYFDKECSKLTGMEHLYKNKLQNFAQKKNLTLPVYTCERD 240

Query: 241 GPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAVAKVALMSLCQDGAQQDSGLYKNLLQ 300
           GPPHASRFRCKVEIDGKTYESPEF  TLKDAENAVAKVAL+S CQDG Q+DSGLYKNLLQ
Sbjct: 241 GPPHASRFRCKVEIDGKTYESPEFHATLKDAENAVAKVALLSSCQDGVQEDSGLYKNLLQ 300

Query: 301 EMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKIGEETFEGERLRTKKQAEMSAAKVAYITL 360
           EMAQK+GLGLP YST QSGE+HVP+FVSTVKIGE  FEGE+ RTKKQAEMSAAK AY+++
Sbjct: 301 EMAQKKGLGLPVYSTSQSGEIHVPVFVSTVKIGEANFEGEQSRTKKQAEMSAAKAAYMSI 360

Query: 361 KEGKSSKNPLIASQVVSSSLQSDVITDLEPQVSSDLVISHPSMTIEKRPNDGGSQSISTR 420
           KE                                                  GSQSISTR
Sbjct: 361 KE--------------------------------------------------GSQSISTR 420

Query: 421 KRAPSSCDLGYEVPRE-------------TNDYVLNLVSKLEAGKSSSSKRVFVCPRQPN 480
           KRAPSSCD+ +EV R+             TNDYVLNLVSKLEAGKSSSSKRV VCPRQPN
Sbjct: 421 KRAPSSCDIDHEVSRDIAISSRNVAQPGNTNDYVLNLVSKLEAGKSSSSKRVIVCPRQPN 444

Query: 481 MTFPKDSTVLPISDDQWVAFSLSTEGSQ 496
           MTFPKD TVLP+SDDQWVAFSLST+ +Q
Sbjct: 481 MTFPKDITVLPVSDDQWVAFSLSTKANQ 444

[Close]

BLAST of Tan0011575 vs. TAIR 10
Match: AT3G62800.1 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 159.5 bits (402), Expect = 7.1e-39
Identity = 91/198 (45.96%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 213 MQHLYKNQLQNFAQKRSLTLPVYTCERDGPPHASRFRCKVEIDGKTYESPEFQVTLKDAE 272
           M H+YK QLQ +A + +L LPVY  ER+GPPHA RFRC V   G+T++S EF  TLK AE
Sbjct: 1   MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60

Query: 273 NAVAKVALMSLCQDGAQQDSGLYKNLLQEMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKI 332
           +A AK+A+ SL     +     YKNLLQE+AQK    LP Y+T  SG  H P F STV+ 
Sbjct: 61  HAAAKIAVASLTPQSPEGIDVAYKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTVEF 120

Query: 333 GEETFEGERLRTKKQAEMSAAKVAYITLKEGKSSKNPLIASQVVSSSLQSDVITDLEPQV 392
             + F GE  +TKK AEMSAAKVA++++K G S++     S  + S  Q DV ++++   
Sbjct: 121 AGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQT---GSPTLPSERQEDVNSNVKS-- 180

Query: 393 SSDLVISHPSMTIEKRPN 411
           S   + S PS  +   P+
Sbjct: 181 SPQEIHSQPSSKVVMTPD 193

[Close]

BLAST of Tan0011575 vs. TAIR 10
Match: AT3G62800.2 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 159.5 bits (402), Expect = 7.1e-39
Identity = 91/198 (45.96%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 213 MQHLYKNQLQNFAQKRSLTLPVYTCERDGPPHASRFRCKVEIDGKTYESPEFQVTLKDAE 272
           M H+YK QLQ +A + +L LPVY  ER+GPPHA RFRC V   G+T++S EF  TLK AE
Sbjct: 1   MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60

Query: 273 NAVAKVALMSLCQDGAQQDSGLYKNLLQEMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKI 332
           +A AK+A+ SL     +     YKNLLQE+AQK    LP Y+T  SG  H P F STV+ 
Sbjct: 61  HAAAKIAVASLTPQSPEGIDVAYKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTVEF 120

Query: 333 GEETFEGERLRTKKQAEMSAAKVAYITLKEGKSSKNPLIASQVVSSSLQSDVITDLEPQV 392
             + F GE  +TKK AEMSAAKVA++++K G S++     S  + S  Q DV ++++   
Sbjct: 121 AGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQT---GSPTLPSERQEDVNSNVKS-- 180

Query: 393 SSDLVISHPSMTIEKRPN 411
           S   + S PS  +   P+
Sbjct: 181 SPQEIHSQPSSKVVMTPD 193

[Close]

BLAST of Tan0011575 vs. TAIR 10
Match: AT3G62800.3 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 159.5 bits (402), Expect = 7.1e-39
Identity = 91/198 (45.96%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 213 MQHLYKNQLQNFAQKRSLTLPVYTCERDGPPHASRFRCKVEIDGKTYESPEFQVTLKDAE 272
           M H+YK QLQ +A + +L LPVY  ER+GPPHA RFRC V   G+T++S EF  TLK AE
Sbjct: 1   MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60

Query: 273 NAVAKVALMSLCQDGAQQDSGLYKNLLQEMAQKRGLGLPTYSTLQSGEVHVPIFVSTVKI 332
           +A AK+A+ SL     +     YKNLLQE+AQK    LP Y+T  SG  H P F STV+ 
Sbjct: 61  HAAAKIAVASLTPQSPEGIDVAYKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTVEF 120

Query: 333 GEETFEGERLRTKKQAEMSAAKVAYITLKEGKSSKNPLIASQVVSSSLQSDVITDLEPQV 392
             + F GE  +TKK AEMSAAKVA++++K G S++     S  + S  Q DV ++++   
Sbjct: 121 AGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQT---GSPTLPSERQEDVNSNVKS-- 180

Query: 393 SSDLVISHPSMTIEKRPN 411
           S   + S PS  +   P+
Sbjct: 181 SPQEIHSQPSSKVVMTPD 193

[Close]

BLAST of Tan0011575 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 139.0 bits (349), Expect = 1.0e-32
Identity = 69/155 (44.52%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 216 LYKNQLQNFAQKRSLTLPVYTCERDGPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAV 275
           +YKNQLQ  AQ+   +LP YTC R+GP HA RF+  V  +G+ +ESP +  TL+ AE++ 
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 276 AKVALMSLCQDGAQQ--------DSGLYKNLLQEMAQKRGLGLPTYSTLQSGEVHVPIFV 335
           A+VAL +L   G  +        ++G+YKNLLQE A + GL LP Y++++SG  H+P F 
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 336 STVKIGEETFEGERLRTKKQAEMSAAKVAYITLKE 363
            TV++   +F GE  +TKKQAE +AA  A+ +L++
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRK 155

[Close]

BLAST of Tan0011575 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 139.0 bits (349), Expect = 1.0e-32
Identity = 69/155 (44.52%), Postives = 102/155 (65.81%), Query Frame = 0


Query: 216 LYKNQLQNFAQKRSLTLPVYTCERDGPPHASRFRCKVEIDGKTYESPEFQVTLKDAENAV 275
           +YKNQLQ  AQ+   +LP YTC R+GP HA RF+  V  +G+ +ESP +  TL+ AE++ 
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 276 AKVALMSLCQDGAQQ--------DSGLYKNLLQEMAQKRGLGLPTYSTLQSGEVHVPIFV 335
           A+VAL +L   G  +        ++G+YKNLLQE A + GL LP Y++++SG  H+P F 
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 336 STVKIGEETFEGERLRTKKQAEMSAAKVAYITLKE 363
            TV++   +F GE  +TKKQAE +AA  A+ +L++
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRK 155

The following BLAST results are available for this feature:

BLAST of Tan0011575 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H1D4	1.0e-37	45.96	Double-stranded RNA-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=DBR4 PE...	[more]
Q5N8Z0	3.2e-36	28.85	Double-stranded RNA-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q9AV50	8.2e-32	44.91	Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q9LJF5	1.4e-31	44.52	Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE...	[more]
Q9SKN2	1.8e-31	33.33	Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE...	[more]

BLAST of Tan0011575 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904852.1	6.8e-201	75.25	double-stranded RNA-binding protein 1-like isoform X1 [Benincasa hispida]	[more]
XP_023527472.1	8.4e-199	74.76	double-stranded RNA-binding protein 4-like isoform X1 [Cucurbita pepo subsp. pep...	[more]
XP_022980601.1	7.1e-198	74.42	double-stranded RNA-binding protein 4-like isoform X1 [Cucurbita maxima] >XP_022...	[more]
KAG6581661.1	1.6e-197	74.36	Double-stranded RNA-binding protein 4, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022930583.1	3.5e-197	74.56	double-stranded RNA-binding protein 1-like [Cucurbita moschata] >XP_022930584.1 ...	[more]

BLAST of Tan0011575 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IRS0	3.4e-198	74.42	double-stranded RNA-binding protein 4-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1EVN0	1.7e-197	74.56	double-stranded RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1D6X0	2.4e-191	72.25	double-stranded RNA-binding protein 1-like isoform X1 OS=Momordica charantia OX=...	[more]
A0A6J1D5K6	4.5e-190	72.21	double-stranded RNA-binding protein 1-like isoform X2 OS=Momordica charantia OX=...	[more]
A0A6J1IZS6	2.1e-179	69.09	double-stranded RNA-binding protein 1-like isoform X2 OS=Cucurbita maxima OX=366...	[more]

BLAST of Tan0011575 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62800.1	7.1e-39	45.96	double-stranded-RNA-binding protein 4	[more]
AT3G62800.2	7.1e-39	45.96	double-stranded-RNA-binding protein 4	[more]
AT3G62800.3	7.1e-39	45.96	double-stranded-RNA-binding protein 4	[more]
AT3G26932.1	1.0e-32	44.52	dsRNA-binding protein 3	[more]
AT3G26932.2	1.0e-32	44.52	dsRNA-binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 2..69 e-value: 3.3E-15 score: 66.5 coord: 295..361 e-value: 4.5E-18 score: 76.0 coord: 217..284 e-value: 7.7E-16 score: 68.6
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 3..65 e-value: 8.3E-15 score: 55.3 coord: 217..280 e-value: 1.5E-12 score: 48.0 coord: 295..357 e-value: 1.0E-11 score: 45.4
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 1..70 score: 14.514391
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 294..362 score: 11.698341
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 216..285 score: 11.892551
None	No IPR available	GENE3D	3.30.160.20		coord: 213..283 e-value: 2.6E-23 score: 84.1
None	No IPR available	GENE3D	3.30.160.20		coord: 1..69 e-value: 1.5E-21 score: 78.4
None	No IPR available	GENE3D	3.30.160.20		coord: 287..361 e-value: 8.6E-22 score: 79.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 408..423
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 404..429
None	No IPR available	PANTHER	PTHR46031	FAMILY NOT NAMED	coord: 1..400 coord: 446..490
None	No IPR available	PANTHER	PTHR46031:SF16	DOUBLE-STRANDED RNA-BINDING PROTEIN 4	coord: 1..400 coord: 446..490
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 211..283
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 2..75
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 294..361
IPR044450	AtDRB-like, first double-stranded RNA binding domain, plant	CDD	cd19907	DSRM_AtDRB-like_rpt1	coord: 216..283 e-value: 7.17902E-30 score: 109.488

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0011575.1	Tan0011575.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003725	double-stranded RNA binding