Tan0011558 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCATCCAAGTCAAGATCATGATGTAGTTGTTGTGTTAGAAGAGGAGAATGCTTTGGAGGTTAAACGTTCGACAGCGCAACATCGTACACGAGCTTCAGGTAATACTTAGAGCATATTAACGTATACTTATAAATGTTTCTCTATTGTTTAATTAGTTGATCCATCCTTATTTCAGGATCTAGATCACGTTCTAGAGTAGCCTCTAGATCGTGAGGCAGGAGGGCTAGAGGGCATAGCCGAAGGATTGAGTTAGAGCGCTATGTCAATGCACATGGTAGAATACCCATCGAGATCGATGAGAAGGTCGACAAACCAGTGTGTACTAAGGCCACTACGTTCAGTGGAGCCATTGGTACCATCACCCGAGATACAATTCCACTGCATTATAAAACGTGGAGCGACGTCCCAAAGCAAGTTCGAGACAGCATAAAAGATCGACTCTCTGTAAGTTTACTTAGGTTAATATGCATTTTCAATATCGTGAATTTAATCATTAATGGATGCTTACTAAGTTATTACTTAATTTACAGACATACTTTATCGTGGATTTGACCAAACATCATATAAATAGATACGTAGAGCGACTGATATCATCCACATTCAAGGAATATAGGGTAGAATTGTATCAATACTACCTTGAGTTTGACGACCCCAAAGAGGCTCCTGAATGTCCTCTAGAAAGAATCGATAATCAAGCTGATTGGAATATGTTATGTGATCGATGGGAGACCGCTGAATGGAAGGTATACTTTCTTGTTTTACTTTATTATATGTATAACTCATTCACTTTATTCAATATACTGACCATAAATTGTTGAAGGAAATAACGGAGAAAAATAAGAAAAGTCGAGCCAATCTTCCTCACAACCATCGAACTGGGTACAAGTCATTTGTTCAAGTGCAGAACGAATTGGTTAGACACAAACTCATGTTTTTTCTTATTTATATTATTTTCTTATCATGACTAATAGTGTGCCTTTGAATTTCAGAAGATACAAAAGGGTCATGAAGTAGGCCAAGTTGATTTGTTCCATGAAAGTCACTTCAGCATAAAGGACGGATGGGTGAACTACCATGCGAGGGATGCATATGTAAGTTATATTTAATCATATTGCATTAGTTTATGTGTTTATCATCCATTTTAACCCCATTGTATTATGAATGTAGTTGAAAATGCAACAACTTCTTGAAGCATCATCACAAGAAGGATCTGAGCCAATCTCACAGTCAGAAGTTTGTAAAATGGTTTTGGGTACTCGATCAGGCCACATAAAAGGTCTTGGTTGGGACCCAAATTCTAGTTCGTCGTCTAGCGTCACATCTTCTTCCCAACATGAAAAAGAGCTTGAAAAGAAGGTGGAGCATATGCAAGCTGAGATTGGTAACTTAACGACGAAGTTGTCCTCATGGGAAGAAAGATGGACTGAATTCACAAAGTACATGGATGAAAGGCAGGGTGAAGGTTCTTCAAACCCCTAG ATGGTGCATCCAAGTCAAGATCATGATGTAGTTGTTGTGTTAGAAGAGGAGAATGCTTTGGAGGTTAAACGTTCGACAGCGCAACATCGTACACGAGCTTCAGGCAGGAGGGCTAGAGGGCATAGCCGAAGGATTGAGTTAGAGCGCTATGTCAATGCACATGGTAGAATACCCATCGAGATCGATGAGAAGGTCGACAAACCAGTGTGTACTAAGGCCACTACGTTCAGTGGAGCCATTGGTACCATCACCCGAGATACAATTCCACTGCATTATAAAACGTGGAGCGACGTCCCAAAGCAAGTTCGAGACAGCATAAAAGATCGACTCTCTTTGAAAATGCAACAACTTCTTGAAGCATCATCACAAGAAGGATCTGAGCCAATCTCACAGTCAGAAGTTTGTAAAATGGTTTTGGGTACTCGATCAGGCCACATAAAAGGTCTTGGTTGGGACCCAAATTCTAGTTCGTCGTCTAGCGTCACATCTTCTTCCCAACATGAAAAAGAGCTTGAAAAGAAGGTGGAGCATATGCAAGCTGAGATTGGTAACTTAACGACGAAGTTGTCCTCATGGGAAGAAAGATGGACTGAATTCACAAAGTACATGGATGAAAGGCAGGGTGAAGGTTCTTCAAACCCCTAG ATGGTGCATCCAAGTCAAGATCATGATGTAGTTGTTGTGTTAGAAGAGGAGAATGCTTTGGAGGTTAAACGTTCGACAGCGCAACATCGTACACGAGCTTCAGGCAGGAGGGCTAGAGGGCATAGCCGAAGGATTGAGTTAGAGCGCTATGTCAATGCACATGGTAGAATACCCATCGAGATCGATGAGAAGGTCGACAAACCAGTGTGTACTAAGGCCACTACGTTCAGTGGAGCCATTGGTACCATCACCCGAGATACAATTCCACTGCATTATAAAACGTGGAGCGACGTCCCAAAGCAAGTTCGAGACAGCATAAAAGATCGACTCTCTTTGAAAATGCAACAACTTCTTGAAGCATCATCACAAGAAGGATCTGAGCCAATCTCACAGTCAGAAGTTTGTAAAATGGTTTTGGGTACTCGATCAGGCCACATAAAAGGTCTTGGTTGGGACCCAAATTCTAGTTCGTCGTCTAGCGTCACATCTTCTTCCCAACATGAAAAAGAGCTTGAAAAGAAGGTGGAGCATATGCAAGCTGAGATTGGTAACTTAACGACGAAGTTGTCCTCATGGGAAGAAAGATGGACTGAATTCACAAAGTACATGGATGAAAGGCAGGGTGAAGGTTCTTCAAACCCCTAG MVHPSQDHDVVVVLEEENALEVKRSTAQHRTRASGRRARGHSRRIELERYVNAHGRIPIEIDEKVDKPVCTKATTFSGAIGTITRDTIPLHYKTWSDVPKQVRDSIKDRLSLKMQQLLEASSQEGSEPISQSEVCKMVLGTRSGHIKGLGWDPNSSSSSSVTSSSQHEKELEKKVEHMQAEIGNLTTKLSSWEERWTEFTKYMDERQGEGSSNP Homology
BLAST of Tan0011558 vs. NCBI nr
Match: XP_038887409.1 (poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 142.1 bits (357), Expect = 5.5e-30 Identity = 119/377 (31.56%), Postives = 151/377 (40.05%), Query Frame = 0
BLAST of Tan0011558 vs. NCBI nr
Match: XP_038887413.1 (uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]) HSP 1 Score: 131.7 bits (330), Expect = 7.4e-27 Identity = 119/404 (29.46%), Postives = 151/404 (37.38%), Query Frame = 0
BLAST of Tan0011558 vs. NCBI nr
Match: XP_038887408.1 (poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 131.7 bits (330), Expect = 7.4e-27 Identity = 119/404 (29.46%), Postives = 151/404 (37.38%), Query Frame = 0
BLAST of Tan0011558 vs. NCBI nr
Match: XP_038887411.1 (poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida] >XP_038887412.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida]) HSP 1 Score: 110.9 bits (276), Expect = 1.4e-20 Identity = 60/128 (46.88%), Postives = 81/128 (63.28%), Query Frame = 0
BLAST of Tan0011558 vs. NCBI nr
Match: XP_038887410.1 (poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida]) HSP 1 Score: 110.9 bits (276), Expect = 1.4e-20 Identity = 60/128 (46.88%), Postives = 81/128 (63.28%), Query Frame = 0
BLAST of Tan0011558 vs. ExPASy TrEMBL
Match: A0A6J1DUH3 (uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023212 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 2.3e-18 Identity = 57/124 (45.97%), Postives = 82/124 (66.13%), Query Frame = 0
BLAST of Tan0011558 vs. ExPASy TrEMBL
Match: A0A5A7T4Q4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold119G00100 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 6.6e-13 Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 0
BLAST of Tan0011558 vs. ExPASy TrEMBL
Match: A0A5A7TT86 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold427G00010 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 2.5e-12 Identity = 67/197 (34.01%), Postives = 94/197 (47.72%), Query Frame = 0
BLAST of Tan0011558 vs. ExPASy TrEMBL
Match: A0A5A7TEQ7 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001060 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 3.3e-12 Identity = 53/144 (36.81%), Postives = 74/144 (51.39%), Query Frame = 0
BLAST of Tan0011558 vs. ExPASy TrEMBL
Match: A0A5D3BKN7 (DUF4218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00810 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 3.3e-12 Identity = 63/199 (31.66%), Postives = 97/199 (48.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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