Tan0011146 (gene) Snake gourd v1

Overview


Name	Tan0011146
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	nuclear factor Y, subunit B13
Location	LG09: 70490188 .. 70493603 (-)
RNA-Seq Expression	Tan0011146
Synteny	Tan0011146

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAACCTCTGATAAAAATGCATATATCAACAATGCCCTTCCTCCACCACTCCATCGCCTTCTTCGATTCCGATCTTCTGCAATCGGTGGGATCGCCGTCGTTATTTTCCGGTTGCGCGTACTTAATTTGTCCGTTGGCTTCTGGGACGCCGTGAGTTCCGATCTCCTCCTCTCTCCTCTGCATCGTCTGTTTTAATTTTTCCAGAATTTTTTTTCTGTTCTTGATTTCTGCCTTTGGGGTTCTTTTTCCTCTGATTTCTTTTTTATATGTTGTATGTTTTGCAGTCTCGAAGGTTCGGTATGGAGCCGATGGACATAGTTGGAAAGTCTAAAGAGGACGCCTCGCTTCCAAAGGGTACTTGTAATTTCTGCGGTGGTTTTTGGTGTTTTTGTGTGAATTTTCTGGGGGGTATTTTCCCCCTTAGCGTAGTGAATTTGATGTATGATTCATGGACTAGTTTGGTGTTTTCTCCTCTATTTTAAAACAATAATCTGACTTTGGGGATCCTTTTTAGAAGAAGTACCGAATCGCGGGTCGAAGTCGATGTCTGGAAAATTTAGATTTCGTTACATGAACGATTAATGGTACCTTTAGTTATCGTTTTCACTGGAGAGGATGAACCTGGTGCTTGTTTATCTTTTCTTGATACGGCTGCAGGGCGCGGCACTTTTTGGTGGGAAATTGAAACTAGATAATAGACTAGAGTTCATGGACGGAAACCCTTTGCTTGATTTTCCTTGTGGTTCTCAGTCTTTTTTCTGTGGGGTTAAAGCGAGTGACTAGTATGCTGCATGCCATACCTAAATCTGGATGCCTGAGTTTCAGTTCATCAGTCCTCACTGTATCGCGTTCACGTTCTGTAAGCATAGATAGATTTCAATTCGACCTCAGAAAGAGTAGCTTTGGTGGACGTTTCTGTTCCCCAAATGTCAGAGTTCCTCTATTTTCGTCTTCCATTCATGTTTTTGCTTGCATCCCACTTCTGCTTCACTAATTAAACAGTCACCGAGTCTCCAAACAACAGTCGTCTTATTTTTAGTATTTATGTACATAGTAGAATTTTCAAAAAAACAGTCGGCTTGTCTTCTGTTATGCAATTTCATCTTACTTCGAGTCTTCCCCTTTATTCCTTGTCTTCTGCTTCCTTTGAGTTGGTTTGGTCGCGTGGTTCTTGTTCAGCTTTCAAGCTCGACGTATGTGTTAAGAAAGAGTTGCTTTTGTGGACGTTTTGTTTCCCAAATGTTGGAGTTCCTCTACTCCCGTGTCCTTTTTCTTTCAGTTCTTTTAGCTAACATGAATTGGTTCAAACTTTCATGTGATGTATTTTGGTGACAATAATATGACTCCCTTGTACAAACGAAGTAATTGGAGACCATTTAATTGCTTAACAATTGCTCCTCCTTTTTTTTTTTTTAATAATAAATTCTTTTGAACATGGGAGATTCAAACTTTTAACCTTTGGTAGTGGTTATAAGGCTTTCACCCATTGAGTTATGCGCAGAGCGACAAGTGCTTTTGTTTTATACACCATAATTTCTGATTTCCCTGTAGTTTGTTTTAGTTGTTAAATTTTTGTTTTGTTCAATTTTTCTTGGTCAGCGACTATGACTAAAATTATTAAAGAGATGTTGCCCCCTGATGTGCGTGTTGCAAGAGATGCCCAAGATCTTCTGATTGAGTGTTGTGTAGGTGAGAATATCTTGCTCTGCCATTTTCTTTGTACATTTTAACATTTAATGTGTTAGTACTTGGTGTTGGTTTCCTGCACTACTGTTAATGGCCATTTGTGGTTCTATTATTTTTCCAACAATAATGACCAGTAGTTGTCTTTGGACACTGCTTTAAGTTGTACTATTTATATTTAGTTGATTTTTTCTGTACTCTTTTTTACTATTGTTCCCCCGCCCCTCCTTAAGCTGGTGGCAGTTTTTATGACAGTGACCAATTATTACTTCTCACTTGAGCATTGCACTCTTTATTTTTGGTGTTCTTGCAGAGTTTATAAACCTTGTATCATCCGAATCTAATGAAGTTTGTAGCAAAGAAGAAAAAAGAACAATTGCACCTGAGCATGTGCTCAAGGCTCTCGAGGTCTATGGACTATCCAAGTTTCCTTTATATTCTTAATAATACAGACTTATATGTGTTACTATTACTTCTTTTTTTTGGATAATGCATGCTGACATTGTCTTGTTTTTACCATTCAGCCCCATGAAATTCAGATCTTCCATTCTGTAGGAGTTGATTTCACAATTGCCTGATAAAGTATAAAATCTTAAAATGAATGAATGGTCGTCAGTGGAATATGGATTTTGATGCCCTAACTATACCTTACCGAAATAATATTATCCTATCATATGCTCCTTGTCTGTTTTTTTGATGCTGCCCATACCATTCTGATCATGTAATCATTTTAACGTTCTTTTCTTTTCTTTTTTTTTTTTTAAAAAAAAAATTTAAGCACTGATCATATCGTTCTATATAAATCTATAAATCTTAAATATTTATAGCACATAATTTATATTGAATCTACTCTGTTCTCTTGTATAATCGACCTCAGATTGGGTCAAGCTTAAGCAGTTCTAATCTTTAAATCACAATATAAGTTAACAATGTCATGTGGAGTTTGATTGCACGTAAGAACACTAGTGGTGAAGTCCCTCTTTTTGGATTGTATTCTAACTTTTTCATTCTTGTGTTTGAAGAAGAGTCATTTGCAGCATTTGCTAGGTTACTTTTATTTTATGTCTGCTTTTGGACTTACACTTATGATTATATGTATGATCAGGTGCTTGGTTTTAGTGAATACATTGAGGAAGTTTATGCTGCATATGAACAACACAGGCTGGAAACTATGGTAATGCTTCAGTATAGAAATTTGCTGGGAGGTCTAGACAATCAGTATCTATTTTAATTTGTATTTAAAGAGAATTCGTTTCCATCATTCTCATAACTAGGATTTATTATCACAAAATGTAGTTATGACTTCAATACAAGTTGTCCCAAGGCATCTAGAAGCACTAACATTTTTCTTTTCTCTCCATCGAGAAAACTCTCCAGCAAGACTCGTTGAAAGGTGGAAAGTGGAGTAATGGAGCCGAGATGACCGAAGAAGAAGCTTTGGCTGAGCAGCAAAGAATGTTTGCAGAGGCACGTGCAAGAATGAATGGCAGTAACACTGCTCCGAAGCAACCGGAGCCAGAGCAAAGTTTAGAGAGCTAATTTTAGGATCTTTATTTTCTTCAACCATAGGCAAGATTCCTTGACCCTTCCATTTGTGCCTCAAATATGCCTTGTGCATATGTACAAAAAAGAAATGATTAACCTAGCTACTGGGCTCTGTGAAGATGCATTGTAATATATATCCATATCTGCGGATCCATGTCTAGTTAATACAAGTAGTGACTGTGTTTAAA

mRNA sequence

ATAACCTCTGATAAAAATGCATATATCAACAATGCCCTTCCTCCACCACTCCATCGCCTTCTTCGATTCCGATCTTCTGCAATCGGTGGGATCGCCGTCGTTATTTTCCGGTTGCGCGTACTTAATTTGTCCGTTGGCTTCTGGGACGCCTCTCGAAGGTTCGGTATGGAGCCGATGGACATAGTTGGAAAGTCTAAAGAGGACGCCTCGCTTCCAAAGGCGACTATGACTAAAATTATTAAAGAGATGTTGCCCCCTGATGTGCGTGTTGCAAGAGATGCCCAAGATCTTCTGATTGAGTGTTGTGTAGAGTTTATAAACCTTGTATCATCCGAATCTAATGAAGTTTGTAGCAAAGAAGAAAAAAGAACAATTGCACCTGAGCATGTGCTCAAGGCTCTCGAGGTGCTTGGTTTTAGTGAATACATTGAGGAAGTTTATGCTGCATATGAACAACACAGGCTGGAAACTATGAAAACTCTCCAGCAAGACTCGTTGAAAGGTGGAAAGTGGAGTAATGGAGCCGAGATGACCGAAGAAGAAGCTTTGGCTGAGCAGCAAAGAATGTTTGCAGAGGCACGTGCAAGAATGAATGGCAGTAACACTGCTCCGAAGCAACCGGAGCCAGAGCAAAGTTTAGAGAGCTAATTTTAGGATCTTTATTTTCTTCAACCATAGGCAAGATTCCTTGACCCTTCCATTTGTGCCTCAAATATGCCTTGTGCATATGTACAAAAAAGAAATGATTAACCTAGCTACTGGGCTCTGTGAAGATGCATTGTAATATATATCCATATCTGCGGATCCATGTCTAGTTAATACAAGTAGTGACTGTGTTTAAA

Coding sequence (CDS)

ATGGAGCCGATGGACATAGTTGGAAAGTCTAAAGAGGACGCCTCGCTTCCAAAGGCGACTATGACTAAAATTATTAAAGAGATGTTGCCCCCTGATGTGCGTGTTGCAAGAGATGCCCAAGATCTTCTGATTGAGTGTTGTGTAGAGTTTATAAACCTTGTATCATCCGAATCTAATGAAGTTTGTAGCAAAGAAGAAAAAAGAACAATTGCACCTGAGCATGTGCTCAAGGCTCTCGAGGTGCTTGGTTTTAGTGAATACATTGAGGAAGTTTATGCTGCATATGAACAACACAGGCTGGAAACTATGAAAACTCTCCAGCAAGACTCGTTGAAAGGTGGAAAGTGGAGTAATGGAGCCGAGATGACCGAAGAAGAAGCTTTGGCTGAGCAGCAAAGAATGTTTGCAGAGGCACGTGCAAGAATGAATGGCAGTAACACTGCTCCGAAGCAACCGGAGCCAGAGCAAAGTTTAGAGAGCTAA

Protein sequence

MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES

Homology

[Close]

BLAST of Tan0011146 vs. ExPASy Swiss-Prot
Match: P49592 (Protein Dr1 homolog OS=Arabidopsis thaliana OX=3702 GN=DR1 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 6.5e-63
Identity = 127/160 (79.38%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           M+PMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESN+
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VC+KE+KRTIAPEHVLKAL+VLGF EYIEEVYAAYEQH+ ETM    QD+ +  KW+ GA
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETM----QDTQRSVKWNPGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 161
           +MTEEEA AEQQRMFAEARARMNG  + P+   PE    S
Sbjct: 121 QMTEEEAAAEQQRMFAEARARMNGGVSVPQPEHPETDQRS 156

[Close]

BLAST of Tan0011146 vs. ExPASy Swiss-Prot
Match: Q55DJ5 (Protein Dr1 homolog OS=Dictyostelium discoideum OX=44689 GN=dr1 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.0e-28
Identity = 67/146 (45.89%), Postives = 104/146 (71.23%), Query Frame = 0


Query: 11  KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTI 70
           +++ SLPKAT++K+IKEMLP DV+ + + +DL++ECCVEFI+L+SSE+N++C +E+KRTI
Sbjct: 8   EDNLSLPKATVSKLIKEMLPQDVKCSNETRDLILECCVEFIHLISSEANDICGREQKRTI 67

Query: 71  APEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGAEMTEEEALAE 130
           A EHV+KAL  LGFS+Y ++V   Y++H+LE    +   S    K+ N  + T E+ + E
Sbjct: 68  AAEHVIKALTELGFSDYTQKVSDVYDKHKLE----VSTKSKSSKKFENLGKPT-EQLIRE 127

Query: 131 QQRMFAEARARMNGSNTAPKQPEPEQ 157
           QQ +FA+AR+    S  A +  + +Q
Sbjct: 128 QQLLFAKARSAFQASPEAQQLQQLQQ 148

[Close]

BLAST of Tan0011146 vs. ExPASy Swiss-Prot
Match: Q5ZMV3 (Protein Dr1 OS=Gallus gallus OX=9031 GN=DR1 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.2e-25
Identity = 61/128 (47.66%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 12  EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTIA 71
           +D ++P+A + K+IKE L P+VRVA DA++L++ CC EFI+L+SSE+NE+C+K EK+TI+
Sbjct: 9   DDLTIPRAAINKMIKETL-PNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 68

Query: 72  PEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGAEMTEEEALAEQ 131
           PEHV++ALE LGF  YI EV     +  L+  KT+     K         + EEE L +Q
Sbjct: 69  PEHVIQALESLGFGSYISEV-----KEVLQECKTVALKRRKASSRLENLGIPEEELLRQQ 128

Query: 132 QRMFAEAR 140
           Q +FA+AR
Sbjct: 129 QELFAKAR 130

[Close]

BLAST of Tan0011146 vs. ExPASy Swiss-Prot
Match: Q01658 (Protein Dr1 OS=Homo sapiens OX=9606 GN=DR1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.2e-25
Identity = 61/128 (47.66%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 12  EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTIA 71
           +D ++P+A + K+IKE L P+VRVA DA++L++ CC EFI+L+SSE+NE+C+K EK+TI+
Sbjct: 9   DDLTIPRAAINKMIKETL-PNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 68

Query: 72  PEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGAEMTEEEALAEQ 131
           PEHV++ALE LGF  YI EV     +  L+  KT+     K         + EEE L +Q
Sbjct: 69  PEHVIQALESLGFGSYISEV-----KEVLQECKTVALKRRKASSRLENLGIPEEELLRQQ 128

Query: 132 QRMFAEAR 140
           Q +FA+AR
Sbjct: 129 QELFAKAR 130

[Close]

BLAST of Tan0011146 vs. ExPASy Swiss-Prot
Match: Q91WV0 (Protein Dr1 OS=Mus musculus OX=10090 GN=Dr1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.2e-25
Identity = 61/128 (47.66%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 12  EDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTIA 71
           +D ++P+A + K+IKE L P+VRVA DA++L++ CC EFI+L+SSE+NE+C+K EK+TI+
Sbjct: 9   DDLTIPRAAINKMIKETL-PNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 68

Query: 72  PEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGAEMTEEEALAEQ 131
           PEHV++ALE LGF  YI EV     +  L+  KT+     K         + EEE L +Q
Sbjct: 69  PEHVIQALESLGFGSYISEV-----KEVLQECKTVALKRRKASSRLENLGIPEEELLRQQ 128

Query: 132 QRMFAEAR 140
           Q +FA+AR
Sbjct: 129 QELFAKAR 130

[Close]

BLAST of Tan0011146 vs. NCBI nr
Match: XP_038879126.1 (protein Dr1 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 305.4 bits (781), Expect = 2.8e-79
Identity = 159/160 (99.38%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMK LQQDSLKGGKWSNGA
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKLLQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 161
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 160

[Close]

BLAST of Tan0011146 vs. NCBI nr
Match: XP_022134978.1 (protein Dr1 homolog isoform X1 [Momordica charantia])

HSP 1 Score: 305.1 bits (780), Expect = 3.7e-79
Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMK+LQQDSLKGGKWSNGA
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKSLQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 161
           EMTEEEALAEQQRMFAEARARMNG+NTAPKQPEPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGNNTAPKQPEPEQSLES 160

[Close]

BLAST of Tan0011146 vs. NCBI nr
Match: XP_022929360.1 (protein Dr1 homolog isoform X1 [Cucurbita moschata] >XP_023000849.1 protein Dr1 homolog isoform X1 [Cucurbita maxima] >XP_023530792.1 protein Dr1 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VCSKE+KRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA
Sbjct: 61  VCSKEDKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 161
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQ EPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQLEPEQSLES 160

[Close]

BLAST of Tan0011146 vs. NCBI nr
Match: XP_022921863.1 (protein Dr1 homolog isoform X1 [Cucurbita moschata] >XP_022987314.1 protein Dr1 homolog isoform X1 [Cucurbita maxima] >XP_023516546.1 protein Dr1 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299.7 bits (766), Expect = 1.5e-77
Identity = 157/160 (98.12%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHR ETMK  QQDSLKGGKWSNGA
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRHETMKFPQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 161
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 160

[Close]

BLAST of Tan0011146 vs. NCBI nr
Match: XP_011648700.1 (protein Dr1 homolog isoform X1 [Cucumis sativus] >KGN63793.2 hypothetical protein Csa_013109 [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 2.0e-77
Identity = 156/160 (97.50%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VCSKEEKRTIAPEHVLKALEVLGFSEYI EVYAAYEQHR+ETMK LQQDSLKGGKWSNGA
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIAEVYAAYEQHRIETMKLLQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 161
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQ EPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQSEPEQSLES 160

[Close]

BLAST of Tan0011146 vs. ExPASy TrEMBL
Match: A0A6J1C3I2 (protein Dr1 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007097 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79
Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMK+LQQDSLKGGKWSNGA
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKSLQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 161
           EMTEEEALAEQQRMFAEARARMNG+NTAPKQPEPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGNNTAPKQPEPEQSLES 160

[Close]

BLAST of Tan0011146 vs. ExPASy TrEMBL
Match: A0A6J1KL43 (protein Dr1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495169 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 8.8e-79
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VCSKE+KRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA
Sbjct: 61  VCSKEDKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 161
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQ EPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQLEPEQSLES 160

[Close]

BLAST of Tan0011146 vs. ExPASy TrEMBL
Match: A0A6J1EU70 (protein Dr1 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435956 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 8.8e-79
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VCSKE+KRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA
Sbjct: 61  VCSKEDKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 161
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQ EPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQLEPEQSLES 160

[Close]

BLAST of Tan0011146 vs. ExPASy TrEMBL
Match: A0A6J1JII3 (protein Dr1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484903 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.4e-78
Identity = 157/160 (98.12%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHR ETMK  QQDSLKGGKWSNGA
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRHETMKFPQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 161
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 160

[Close]

BLAST of Tan0011146 vs. ExPASy TrEMBL
Match: A0A6J1E503 (protein Dr1 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430003 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.4e-78
Identity = 157/160 (98.12%), Postives = 157/160 (98.12%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE
Sbjct: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHR ETMK  QQDSLKGGKWSNGA
Sbjct: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRHETMKFPQQDSLKGGKWSNGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 161
           EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES
Sbjct: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 160

[Close]

BLAST of Tan0011146 vs. TAIR 10
Match: AT5G23090.2 (nuclear factor Y, subunit B13 )

HSP 1 Score: 241.5 bits (615), Expect = 4.6e-64
Identity = 127/160 (79.38%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           M+PMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESN+
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VC+KE+KRTIAPEHVLKAL+VLGF EYIEEVYAAYEQH+ ETM    QD+ +  KW+ GA
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETM----QDTQRSVKWNPGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 161
           +MTEEEA AEQQRMFAEARARMNG  + P+   PE    S
Sbjct: 121 QMTEEEAAAEQQRMFAEARARMNGGVSVPQPEHPETDQRS 156

[Close]

BLAST of Tan0011146 vs. TAIR 10
Match: AT5G23090.1 (nuclear factor Y, subunit B13 )

HSP 1 Score: 241.5 bits (615), Expect = 4.6e-64
Identity = 127/160 (79.38%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           M+PMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESN+
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VC+KE+KRTIAPEHVLKAL+VLGF EYIEEVYAAYEQH+ ETM    QD+ +  KW+ GA
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETM----QDTQRSVKWNPGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 161
           +MTEEEA AEQQRMFAEARARMNG  + P+   PE    S
Sbjct: 121 QMTEEEAAAEQQRMFAEARARMNGGVSVPQPEHPETDQRS 156

[Close]

BLAST of Tan0011146 vs. TAIR 10
Match: AT5G23090.4 (nuclear factor Y, subunit B13 )

HSP 1 Score: 239.6 bits (610), Expect = 1.8e-63
Identity = 126/160 (78.75%), Postives = 138/160 (86.25%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           M+PMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESN+
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESND 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VC+KE+KRTIAPEHVLKAL+VLGF EYIEEVYAAYEQH+ ETM     D+ +  KW+ GA
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYIEEVYAAYEQHKYETM-----DTQRSVKWNPGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES 161
           +MTEEEA AEQQRMFAEARARMNG  + P+   PE    S
Sbjct: 121 QMTEEEAAAEQQRMFAEARARMNGGVSVPQPEHPETDQRS 155

[Close]

BLAST of Tan0011146 vs. TAIR 10
Match: AT5G08190.1 (nuclear factor Y, subunit B12 )

HSP 1 Score: 238.0 bits (606), Expect = 5.1e-63
Identity = 127/153 (83.01%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           M+PMDIVGKSKEDASLPKATMTKIIKEMLP DVRVARDAQDLLIECCVEFINL+SSESNE
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VC+KE+KRTIAPEHVLKAL+VLGF EY+EEVYAAYEQH+ ETM    QDS +  K ++GA
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYVEEVYAAYEQHKYETM----QDSQRSVKMNSGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPE 154
           EMTEEEA AEQQRMFAEARARMNG  T P QPE
Sbjct: 121 EMTEEEAAAEQQRMFAEARARMNGGVTVP-QPE 148

[Close]

BLAST of Tan0011146 vs. TAIR 10
Match: AT5G08190.2 (nuclear factor Y, subunit B12 )

HSP 1 Score: 235.7 bits (600), Expect = 2.5e-62
Identity = 126/153 (82.35%), Postives = 136/153 (88.89%), Query Frame = 0


Query: 1   MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNE 60
           M+PMDIVGKSKEDASLPKATMTKIIKEMLP DVRVARDAQDLLIECCVEFINL+SSESNE
Sbjct: 1   MDPMDIVGKSKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNE 60

Query: 61  VCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMKTLQQDSLKGGKWSNGA 120
           VC+KE+KRTIAPEHVLKAL+VLGF EY+EEVYAAYEQH+ ETM     DS +  K ++GA
Sbjct: 61  VCNKEDKRTIAPEHVLKALQVLGFGEYVEEVYAAYEQHKYETM-----DSQRSVKMNSGA 120

Query: 121 EMTEEEALAEQQRMFAEARARMNGSNTAPKQPE 154
           EMTEEEA AEQQRMFAEARARMNG  T P QPE
Sbjct: 121 EMTEEEAAAEQQRMFAEARARMNGGVTVP-QPE 147

The following BLAST results are available for this feature:

BLAST of Tan0011146 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49592	6.5e-63	79.38	Protein Dr1 homolog OS=Arabidopsis thaliana OX=3702 GN=DR1 PE=1 SV=1	[more]
Q55DJ5	3.0e-28	45.89	Protein Dr1 homolog OS=Dictyostelium discoideum OX=44689 GN=dr1 PE=3 SV=1	[more]
Q5ZMV3	9.2e-25	47.66	Protein Dr1 OS=Gallus gallus OX=9031 GN=DR1 PE=2 SV=1	[more]
Q01658	9.2e-25	47.66	Protein Dr1 OS=Homo sapiens OX=9606 GN=DR1 PE=1 SV=1	[more]
Q91WV0	9.2e-25	47.66	Protein Dr1 OS=Mus musculus OX=10090 GN=Dr1 PE=1 SV=1	[more]

BLAST of Tan0011146 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879126.1	2.8e-79	99.38	protein Dr1 homolog isoform X1 [Benincasa hispida]	[more]
XP_022134978.1	3.7e-79	98.75	protein Dr1 homolog isoform X1 [Momordica charantia]	[more]
XP_022929360.1	1.8e-78	98.75	protein Dr1 homolog isoform X1 [Cucurbita moschata] >XP_023000849.1 protein Dr1 ...	[more]
XP_022921863.1	1.5e-77	98.13	protein Dr1 homolog isoform X1 [Cucurbita moschata] >XP_022987314.1 protein Dr1 ...	[more]
XP_011648700.1	2.0e-77	97.50	protein Dr1 homolog isoform X1 [Cucumis sativus] >KGN63793.2 hypothetical protei...	[more]

BLAST of Tan0011146 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C3I2	1.8e-79	98.75	protein Dr1 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007097 PE...	[more]
A0A6J1KL43	8.8e-79	98.75	protein Dr1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495169 PE=4 ...	[more]
A0A6J1EU70	8.8e-79	98.75	protein Dr1 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435956 PE=...	[more]
A0A6J1JII3	7.4e-78	98.13	protein Dr1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484903 PE=4 ...	[more]
A0A6J1E503	7.4e-78	98.13	protein Dr1 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430003 PE=...	[more]

BLAST of Tan0011146 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23090.2	4.6e-64	79.38	nuclear factor Y, subunit B13	[more]
AT5G23090.1	4.6e-64	79.38	nuclear factor Y, subunit B13	[more]
AT5G23090.4	1.8e-63	78.75	nuclear factor Y, subunit B13	[more]
AT5G08190.1	5.1e-63	83.01	nuclear factor Y, subunit B12	[more]
AT5G08190.2	2.5e-62	82.35	nuclear factor Y, subunit B12	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 4..145 e-value: 1.1E-41 score: 143.9
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 12..142
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 14..79 e-value: 2.6E-22 score: 78.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..156
IPR044255	Protein Dr1 homolog	PANTHER	PTHR47173	PROTEIN DR1 HOMOLOG	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0011146.1	Tan0011146.1	mRNA
Tan0011146.2	Tan0011146.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046982	protein heterodimerization activity