Tan0010473 (gene) Snake gourd v1

Overview


Name	Tan0010473
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	sigma factor binding protein 2, chloroplastic-like
Location	LG08: 40349974 .. 40350594 (-)
RNA-Seq Expression	Tan0010473
Synteny	Tan0010473

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTACATTCACTATTTTCAGATATCTATATATGTATTATATATTTCCTGGAAATCTCGTAGCTTATATATTTTGCAGGCACTGAATAACTTTCCCCCCGCCGAAACCCCCAAATCCCAAACCGATCTAAAAAATGGATCAAAATTTAGTTGTGAATGACGTGCAAGCGATGATGAAAAAAGAAACAAGAAAAAGAATTAAAACGTCGGATCAGAAGAACCAACCCCTGAAAGTTGTGTACATAGCGAACCCCATGAGGGTTCAAACCAGCGCAGCTGAATTTAGAGCCTTGGTCCAAGAACTCACGGGCCGAGATGCCGAATTCCCGGACCCGACTTCGACTAAGTTTCATTCAGGCTCGGTCAATGCTCCGGAGACGAATCTTAAGAAGAAACAAGAAGAGGATGATGAAGAAGAACTATTGCTTGATTTGGCTGCAATGGAGGATTCTAGTGATGATTTTCTTGGGGGTTCGTATAAGAGTTTGGAGGATGTTTTTATGAGGGATATAATGGAGAAATTGGCGGCATGACTCATAAACCTTCATATCAGGTAATTCGGAAGGCTGTTTATTTATCAACTTTATTTGCAAATAAAACATTATTGTATCTCTTTCCACT

mRNA sequence

TAATTACATTCACTATTTTCAGATATCTATATATGTATTATATATTTCCTGGAAATCTCGTAGCTTATATATTTTGCAGGCACTGAATAACTTTCCCCCCGCCGAAACCCCCAAATCCCAAACCGATCTAAAAAATGGATCAAAATTTAGTTGTGAATGACGTGCAAGCGATGATGAAAAAAGAAACAAGAAAAAGAATTAAAACGTCGGATCAGAAGAACCAACCCCTGAAAGTTGTGTACATAGCGAACCCCATGAGGGTTCAAACCAGCGCAGCTGAATTTAGAGCCTTGGTCCAAGAACTCACGGGCCGAGATGCCGAATTCCCGGACCCGACTTCGACTAAGTTTCATTCAGGCTCGGTCAATGCTCCGGAGACGAATCTTAAGAAGAAACAAGAAGAGGATGATGAAGAAGAACTATTGCTTGATTTGGCTGCAATGGAGGATTCTAGTGATGATTTTCTTGGGGGTTCGTATAAGAGTTTGGAGGATGTTTTTATGAGGGATATAATGGAGAAATTGGCGGCATGACTCATAAACCTTCATATCAGGTAATTCGGAAGGCTGTTTATTTATCAACTTTATTTGCAAATAAAACATTATTGTATCTCTTTCCACT

Coding sequence (CDS)

ATGGATCAAAATTTAGTTGTGAATGACGTGCAAGCGATGATGAAAAAAGAAACAAGAAAAAGAATTAAAACGTCGGATCAGAAGAACCAACCCCTGAAAGTTGTGTACATAGCGAACCCCATGAGGGTTCAAACCAGCGCAGCTGAATTTAGAGCCTTGGTCCAAGAACTCACGGGCCGAGATGCCGAATTCCCGGACCCGACTTCGACTAAGTTTCATTCAGGCTCGGTCAATGCTCCGGAGACGAATCTTAAGAAGAAACAAGAAGAGGATGATGAAGAAGAACTATTGCTTGATTTGGCTGCAATGGAGGATTCTAGTGATGATTTTCTTGGGGGTTCGTATAAGAGTTTGGAGGATGTTTTTATGAGGGATATAATGGAGAAATTGGCGGCATGA

Protein sequence

MDQNLVVNDVQAMMKKETRKRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELTGRDAEFPDPTSTKFHSGSVNAPETNLKKKQEEDDEEELLLDLAAMEDSSDDFLGGSYKSLEDVFMRDIMEKLAA

Homology

[Close]

BLAST of Tan0010473 vs. ExPASy Swiss-Prot
Match: Q9LDH1 (Sigma factor binding protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIB1 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.2e-07
Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 14 MKKETRKRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELTGRDA 63
          + +++ K+ K +   N+P+KV YI+NPMRVQT A++FR LVQELTG+DA
Sbjct: 22 VSRKSPKQKKKTTSTNKPIKVRYISNPMRVQTCASKFRELVQELTGQDA 70

[Close]

BLAST of Tan0010473 vs. ExPASy Swiss-Prot
Match: O80669 (Sigma factor binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIB2 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.1e-07
Identity = 31/69 (44.93%), Postives = 46/69 (66.67%), Query Frame = 0


Query: 20 KRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELTGRDAEFPDPTSTKFHSGSVNA 79
          K+ + S   ++P+KV YI+NPMRV+T  ++FR LVQELTG+DA    P+ T F +  ++ 
Sbjct: 25 KQKRKSTTTHKPIKVRYISNPMRVETCPSKFRELVQELTGQDAADLPPSPTTFTAVDLHR 84

Query: 80 P---ETNLK 86
          P   E NL+
Sbjct: 85 PCESEMNLE 93

[Close]

BLAST of Tan0010473 vs. NCBI nr
Match: XP_022147780.1 (sigma factor binding protein 2, chloroplastic-like [Momordica charantia])

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-31
Identity = 85/133 (63.91%), Postives = 105/133 (78.95%), Query Frame = 0


Query: 1   MDQNLVVNDVQAMMKKETRKRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELTGR 60
           MD+NL+V++++  MKKETRKR K S QKNQPLKVVYI+NPMRV TSA+EFRALVQELTGR
Sbjct: 1   MDRNLIVSEMEP-MKKETRKR-KLSVQKNQPLKVVYISNPMRVHTSASEFRALVQELTGR 60

Query: 61  DAEFPDPTSTKFHSGSVNAPETNLKKKQEEDDEEELLLDLA-AMEDSSDDFLGGSYKSLE 120
           DAEFPDP   KFH  S++  E NL+K +E DD+EE  LD+A  MEDS+DDFL   Y+S E
Sbjct: 61  DAEFPDP--AKFHQASIDVGEMNLEKNREGDDDEEASLDVATTMEDSNDDFLESPYESFE 120

Query: 121 DVFMRD-IMEKLA 132
           ++ MR+ +ME  A
Sbjct: 121 EMLMREMLMENFA 129

[Close]

BLAST of Tan0010473 vs. NCBI nr
Match: XP_022941301.1 (uncharacterized protein LOC111446639 [Cucurbita moschata])

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 83/133 (62.41%), Postives = 103/133 (77.44%), Query Frame = 0


Query: 1   MDQNLVVNDVQAMMKKETRKRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELTGR 60
           M+ +LV  DV+   +KE R+  K  D+KNQPLKVVYI+NPMRVQ SAAEFR LVQELTG+
Sbjct: 1   MESSLVGRDVEE-GRKERRRNRKPCDRKNQPLKVVYISNPMRVQASAAEFRGLVQELTGQ 60

Query: 61  DA-EFPDPTSTKFHSGSVNAPETNLKKKQEEDDEEELLLDLAAMEDSSDDFLGGSYKSLE 120
           DA +FP   S    S SV  PETN++K Q++DD+E+LLL  AAMEDSSD FLGGSY+S E
Sbjct: 61  DAPKFPPSAS----SASVQTPETNVRKIQDDDDDEQLLLHWAAMEDSSDGFLGGSYESSE 120

Query: 121 DVFMRDIMEKLAA 133
            +FMRD+++KLAA
Sbjct: 121 GIFMRDMVDKLAA 128

[Close]

BLAST of Tan0010473 vs. NCBI nr
Match: XP_023539403.1 (uncharacterized protein LOC111800056 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134.4 bits (337), Expect = 7.0e-28
Identity = 82/137 (59.85%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 1   MDQNLVVNDVQAMMKKETRKRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELTGR 60
           M+ +LV  DV+   K+  RKR K  D+KNQPLKVVYI+NPMRVQ SAAEFR LVQ+LTG+
Sbjct: 1   MESSLVGRDVEEGRKERRRKR-KPCDRKNQPLKVVYISNPMRVQASAAEFRGLVQQLTGQ 60

Query: 61  DA-EFPDPTSTKFHSGSVNAPETNLKKKQ--EEDDEEELLLDLAA--MEDSSDDFLGGSY 120
           DA +FP        S SV  PETN++K Q  ++DD+++LLL  AA  MEDSSDDFLGGSY
Sbjct: 61  DAPKFPP-------SASVETPETNVRKIQDDDDDDDQQLLLHWAAAIMEDSSDDFLGGSY 120

Query: 121 KSLEDVFMRDIMEKLAA 133
           +SLE +FMRD++++LAA
Sbjct: 121 ESLEGIFMRDMVDRLAA 129

[Close]

BLAST of Tan0010473 vs. NCBI nr
Match: XP_011652185.1 (uncharacterized protein LOC105434994 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 2.3e-23
Identity = 70/138 (50.72%), Postives = 95/138 (68.84%), Query Frame = 0


Query: 1   MDQNLVVNDVQAMMKKETR--KRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELT 60
           MD++L+V+++   MKK T+  ++ K+ ++  QPLKVVYI+NPMRV TSA+EFRALVQELT
Sbjct: 1   MDRSLLVSELTTTMKKNTKTTRKRKSCEENKQPLKVVYISNPMRVHTSASEFRALVQELT 60

Query: 61  GRDAEFPDPTSTKFHSGSVNAPETNLKKK----QEEDDEEELLLDLAAMEDSSDDFLGGS 120
           GRDAEFPDPT     S      + +++KK    + E+DE+ELL+D        DDFL  S
Sbjct: 61  GRDAEFPDPTKFYPASSCEIMNDDDVEKKVVAAEGEEDEQELLID----SSCDDDFLRSS 120

Query: 121 YKSLEDVFMRDIMEKLAA 133
           Y+SLED+  RD+ME   A
Sbjct: 121 YESLEDILRRDVMENFGA 134

[Close]

BLAST of Tan0010473 vs. NCBI nr
Match: XP_008443611.1 (PREDICTED: uncharacterized protein LOC103487167 [Cucumis melo] >KAA0053883.1 sigma factor binding protein 2 [Cucumis melo var. makuwa] >TYK25522.1 sigma factor binding protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 118.6 bits (296), Expect = 4.0e-23
Identity = 71/138 (51.45%), Postives = 94/138 (68.12%), Query Frame = 0


Query: 1   MDQNLVVNDV--QAMMKKETRKRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELT 60
           MD+ L+V+++      KK+T ++ K+ ++  QPLKVVYI+NPMRV TSA+EFRALVQELT
Sbjct: 1   MDRTLLVSELTTTTTKKKKTTRKRKSCEENKQPLKVVYISNPMRVHTSASEFRALVQELT 60

Query: 61  GRDAEFPDPTSTKFHSGSVNAPETNLKKK----QEEDDEEELLLDLAAMEDSSDDFLGGS 120
           GRDAEFPDP  +KF+  S      +L+KK    Q EDDE+ELL+D        DDF   S
Sbjct: 61  GRDAEFPDP--SKFYPASCEIVMNDLEKKVVADQGEDDEQELLID----SSCDDDFWRSS 120

Query: 121 YKSLEDVFMRDIMEKLAA 133
           ++SLED+  RD+ME   A
Sbjct: 121 FESLEDILRRDVMENFGA 132

[Close]

BLAST of Tan0010473 vs. ExPASy TrEMBL
Match: A0A6J1D137 (sigma factor binding protein 2, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111016633 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 8.7e-32
Identity = 85/133 (63.91%), Postives = 105/133 (78.95%), Query Frame = 0


Query: 1   MDQNLVVNDVQAMMKKETRKRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELTGR 60
           MD+NL+V++++  MKKETRKR K S QKNQPLKVVYI+NPMRV TSA+EFRALVQELTGR
Sbjct: 1   MDRNLIVSEMEP-MKKETRKR-KLSVQKNQPLKVVYISNPMRVHTSASEFRALVQELTGR 60

Query: 61  DAEFPDPTSTKFHSGSVNAPETNLKKKQEEDDEEELLLDLA-AMEDSSDDFLGGSYKSLE 120
           DAEFPDP   KFH  S++  E NL+K +E DD+EE  LD+A  MEDS+DDFL   Y+S E
Sbjct: 61  DAEFPDP--AKFHQASIDVGEMNLEKNREGDDDEEASLDVATTMEDSNDDFLESPYESFE 120

Query: 121 DVFMRD-IMEKLA 132
           ++ MR+ +ME  A
Sbjct: 121 EMLMREMLMENFA 129

[Close]

BLAST of Tan0010473 vs. ExPASy TrEMBL
Match: A0A6J1FKR4 (uncharacterized protein LOC111446639 OS=Cucurbita moschata OX=3662 GN=LOC111446639 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 5.6e-31
Identity = 83/133 (62.41%), Postives = 103/133 (77.44%), Query Frame = 0


Query: 1   MDQNLVVNDVQAMMKKETRKRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELTGR 60
           M+ +LV  DV+   +KE R+  K  D+KNQPLKVVYI+NPMRVQ SAAEFR LVQELTG+
Sbjct: 1   MESSLVGRDVEE-GRKERRRNRKPCDRKNQPLKVVYISNPMRVQASAAEFRGLVQELTGQ 60

Query: 61  DA-EFPDPTSTKFHSGSVNAPETNLKKKQEEDDEEELLLDLAAMEDSSDDFLGGSYKSLE 120
           DA +FP   S    S SV  PETN++K Q++DD+E+LLL  AAMEDSSD FLGGSY+S E
Sbjct: 61  DAPKFPPSAS----SASVQTPETNVRKIQDDDDDEQLLLHWAAMEDSSDGFLGGSYESSE 120

Query: 121 DVFMRDIMEKLAA 133
            +FMRD+++KLAA
Sbjct: 121 GIFMRDMVDKLAA 128

[Close]

BLAST of Tan0010473 vs. ExPASy TrEMBL
Match: A0A0A0LFH5 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G820480 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-23
Identity = 70/138 (50.72%), Postives = 95/138 (68.84%), Query Frame = 0


Query: 1   MDQNLVVNDVQAMMKKETR--KRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELT 60
           MD++L+V+++   MKK T+  ++ K+ ++  QPLKVVYI+NPMRV TSA+EFRALVQELT
Sbjct: 1   MDRSLLVSELTTTMKKNTKTTRKRKSCEENKQPLKVVYISNPMRVHTSASEFRALVQELT 60

Query: 61  GRDAEFPDPTSTKFHSGSVNAPETNLKKK----QEEDDEEELLLDLAAMEDSSDDFLGGS 120
           GRDAEFPDPT     S      + +++KK    + E+DE+ELL+D        DDFL  S
Sbjct: 61  GRDAEFPDPTKFYPASSCEIMNDDDVEKKVVAAEGEEDEQELLID----SSCDDDFLRSS 120

Query: 121 YKSLEDVFMRDIMEKLAA 133
           Y+SLED+  RD+ME   A
Sbjct: 121 YESLEDILRRDVMENFGA 134

[Close]

BLAST of Tan0010473 vs. ExPASy TrEMBL
Match: A0A5D3DPQ4 (Sigma factor binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006730 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.9e-23
Identity = 71/138 (51.45%), Postives = 94/138 (68.12%), Query Frame = 0


Query: 1   MDQNLVVNDV--QAMMKKETRKRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELT 60
           MD+ L+V+++      KK+T ++ K+ ++  QPLKVVYI+NPMRV TSA+EFRALVQELT
Sbjct: 1   MDRTLLVSELTTTTTKKKKTTRKRKSCEENKQPLKVVYISNPMRVHTSASEFRALVQELT 60

Query: 61  GRDAEFPDPTSTKFHSGSVNAPETNLKKK----QEEDDEEELLLDLAAMEDSSDDFLGGS 120
           GRDAEFPDP  +KF+  S      +L+KK    Q EDDE+ELL+D        DDF   S
Sbjct: 61  GRDAEFPDP--SKFYPASCEIVMNDLEKKVVADQGEDDEQELLID----SSCDDDFWRSS 120

Query: 121 YKSLEDVFMRDIMEKLAA 133
           ++SLED+  RD+ME   A
Sbjct: 121 FESLEDILRRDVMENFGA 132

[Close]

BLAST of Tan0010473 vs. ExPASy TrEMBL
Match: A0A1S3B8H6 (uncharacterized protein LOC103487167 OS=Cucumis melo OX=3656 GN=LOC103487167 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.9e-23
Identity = 71/138 (51.45%), Postives = 94/138 (68.12%), Query Frame = 0


Query: 1   MDQNLVVNDV--QAMMKKETRKRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELT 60
           MD+ L+V+++      KK+T ++ K+ ++  QPLKVVYI+NPMRV TSA+EFRALVQELT
Sbjct: 1   MDRTLLVSELTTTTTKKKKTTRKRKSCEENKQPLKVVYISNPMRVHTSASEFRALVQELT 60

Query: 61  GRDAEFPDPTSTKFHSGSVNAPETNLKKK----QEEDDEEELLLDLAAMEDSSDDFLGGS 120
           GRDAEFPDP  +KF+  S      +L+KK    Q EDDE+ELL+D        DDF   S
Sbjct: 61  GRDAEFPDP--SKFYPASCEIVMNDLEKKVVADQGEDDEQELLID----SSCDDDFWRSS 120

Query: 121 YKSLEDVFMRDIMEKLAA 133
           ++SLED+  RD+ME   A
Sbjct: 121 FESLEDILRRDVMENFGA 132

[Close]

BLAST of Tan0010473 vs. TAIR 10
Match: AT3G56710.1 (sigma factor binding protein 1 )

HSP 1 Score: 55.8 bits (133), Expect = 3.0e-08
Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 14 MKKETRKRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELTGRDA 63
          + +++ K+ K +   N+P+KV YI+NPMRVQT A++FR LVQELTG+DA
Sbjct: 22 VSRKSPKQKKKTTSTNKPIKVRYISNPMRVQTCASKFRELVQELTGQDA 70

[Close]

BLAST of Tan0010473 vs. TAIR 10
Match: AT2G41180.1 (VQ motif-containing protein )

HSP 1 Score: 55.1 bits (131), Expect = 5.1e-08
Identity = 31/69 (44.93%), Postives = 46/69 (66.67%), Query Frame = 0


Query: 20 KRIKTSDQKNQPLKVVYIANPMRVQTSAAEFRALVQELTGRDAEFPDPTSTKFHSGSVNA 79
          K+ + S   ++P+KV YI+NPMRV+T  ++FR LVQELTG+DA    P+ T F +  ++ 
Sbjct: 25 KQKRKSTTTHKPIKVRYISNPMRVETCPSKFRELVQELTGQDAADLPPSPTTFTAVDLHR 84

Query: 80 P---ETNLK 86
          P   E NL+
Sbjct: 85 PCESEMNLE 93

The following BLAST results are available for this feature:

BLAST of Tan0010473 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDH1	4.2e-07	55.10	Sigma factor binding protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
O80669	7.1e-07	44.93	Sigma factor binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Tan0010473 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147780.1	1.8e-31	63.91	sigma factor binding protein 2, chloroplastic-like [Momordica charantia]	[more]
XP_022941301.1	1.2e-30	62.41	uncharacterized protein LOC111446639 [Cucurbita moschata]	[more]
XP_023539403.1	7.0e-28	59.85	uncharacterized protein LOC111800056 [Cucurbita pepo subsp. pepo]	[more]
XP_011652185.1	2.3e-23	50.72	uncharacterized protein LOC105434994 [Cucumis sativus]	[more]
XP_008443611.1	4.0e-23	51.45	PREDICTED: uncharacterized protein LOC103487167 [Cucumis melo] >KAA0053883.1 sig...	[more]

BLAST of Tan0010473 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D137	8.7e-32	63.91	sigma factor binding protein 2, chloroplastic-like OS=Momordica charantia OX=367...	[more]
A0A6J1FKR4	5.6e-31	62.41	uncharacterized protein LOC111446639 OS=Cucurbita moschata OX=3662 GN=LOC1114466...	[more]
A0A0A0LFH5	1.1e-23	50.72	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G820480 PE=4 SV=...	[more]
A0A5D3DPQ4	1.9e-23	51.45	Sigma factor binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B8H6	1.9e-23	51.45	uncharacterized protein LOC103487167 OS=Cucumis melo OX=3656 GN=LOC103487167 PE=...	[more]

BLAST of Tan0010473 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56710.1	3.0e-08	55.10	sigma factor binding protein 1	[more]
AT2G41180.1	5.1e-08	44.93	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..90
None	No IPR available	PANTHER	PTHR33624:SF2	SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC	coord: 14..129
IPR008889	VQ	PFAM	PF05678	VQ	coord: 37..62 e-value: 4.2E-12 score: 45.3
IPR039335	Sigma factor binding protein 1/2	PANTHER	PTHR33624	SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC	coord: 14..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010473.1	Tan0010473.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051091	positive regulation of DNA-binding transcription factor activity