Tan0008458 (gene) Snake gourd v1

Overview


Name	Tan0008458
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	DNA/RNA polymerases superfamily protein
Location	LG11: 60071722 .. 60074285 (+)
RNA-Seq Expression	Tan0008458
Synteny	Tan0008458

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGTTATGGCTGTTTGAAAACAGGGCAGAAAATCTGAAAATGCTTGAAATTGGAAAGTGTGTTTTCTGTAGTTTTAAGGTTAAAAATCATGAGCTCGAGGTTCTTATGGTTGAGTTGGTTTGTTTGCCAGGCCAAGAGCAAATAGGTCAAGTTTACAAACCAAGGTTCTAATTCTAATACTGTGAGTGACTCTATTTTAGAATTATGACCTATGTTTTTCATCAAAAACATAATTGTTGATCATTGAATCTTGTTTGAACTAATTATGCATAGCTTCATGGAGTTTCTAACATAAAGTTCGTGATGGAACCTAAGCATGCTTTGAATTAGTTGTAACTATAAATCCAAGTATGGAAACTAAATTATGAAAGTATGCTTTCCTTTAGAGAATGTTTTGTGTAAATCCACTTGGGAACATGTTTAGATGATAATGTGAAAATGTCAAGAAATTGTTGTATGTGTTATAAAGACATGATTTCCATGGTACATAAATTATTCCCTTGTTTGTGGTTAACCCCTAATATTGAAGGACATTAGAGAGGTACTTAGGGGGGAATGAATAATGATATCCCGATACTGAAGGACAATGAGAAGGTATCCGGGTAGTAAATGGTTTTACTTTAATACTGAAGGACAATGAGAAGGTATTTGGGTAGTAAATGGTTTTACCTTAATACTGAAGGACATAGAGAAGGTATTAGGGAAAACCAAACGACCAAAGGTATTCCACGTGCACGTGAGAGAGAGGTATGAACCTTATTGGTATAAATGTAACTCTACCACCTCTATGGTTTGATGTGGTATCATATCATGTGTTTTATTGTTATGAGCTTCTATATTATTGATCTATCTACCCTCGATATGATAGTACATTTCGAGTTGTGTGCTATGCATAAGTGGTGACTTAAACCTGCAAATTGGAAGCATGGTTTGTTTATGTTTACAAACAAATGTTAAGGTATTTTCTACTTATAATCTGCCATTATTATGAATCACCTGTGAGCTTATAATGTTTTAAAGATAGACACTCACTGATCTTTTTAGCTCATTTTTTCAATGTTTTCAAACTTTTTCAGGTAGAGATCGAGCTCCTGGTACCTGACATCCTGCCATAGTCTGCTGGAAGTTTCATAAGTTGATAGTTTGTACGTGGCTGGTGTTGTATAGCAAGTCGTTATGTAGTTATAGTTGTTTGTACATAAAAGGTTGTATAAACAGTGGGTTAGCATTTTCTGAGTTGTGATGCTATTGCTCGTTTAAGTTTTCAAATGAGAGACTTAAGAAATGTTTCTTTCTATGTATGTTTAGTAGTTATCAAGTTTCCGCTGTGTTATGTTAAAGTTTACCACATACGAGCATAGTATCTTTATCAGGTAGAACAGGATTATCAGGTATTGATAAGAAGTGAGCAATGTCTGTTGGTTTCATGCCTCTTTCCGGGCTAAGTTAGCAGGTAGTTTGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAGCTCCATGGGAATGAGACAGGGCAAGTTAGCTCTGAGAATAAAGTAAAAAGTCATAACAAGTTATTGAGTTAGTTCAGATCAAACTAGTAGAGTATGGTCCAAGATAGGATAAGAGTAAGTCCAGTTAGGGCTAAAATGTGAATAGTAGTCTAGTGTTGTGTTATTGAGTTAAGTATTCATAGCATGTCTAATGTGTTGATATGTTATAGAAGTCATGCCACCACGTACTAGCAAACGACGCAGGCAGGATCAGGGCAGGACACAGGATCCTACCCAAGGTCAATCTGAGAGGGGATCTAGTGCCCCGAGAGTCCAAACTGAGGCTAGAGATGAGCAACATGTTAGTTCTACACAGGAGGCAGGTAGGCCAGAGAGAGTAAGGCCAAGTTATCCAAAAAAAAAAAAGGCATATAGAATAGAACGTCTGAAGAAATTAGGAGTCACAGTGTTTGATGGTTCCATAGATCCAACTGATGCTGAGATTTGGTTGAATATGTTAGAAAAATGATTTGATGTAATGAGTTGCCCTGAGGAGCAAAGTCAAGCTAGCCACATTCCTACTAGAGAAAGAAGCAGAGGGATGGTGGAAGTCAATACGAGCTAGGCACAGTGATGCACGCACTTTAGATTGGCAAACTTTCAGAGGCATATTTGAAGATAAGTATTACCCTGGCACATACCGCGAGGCGACGAGGAATGAATTTTTTGAATTGAAGCAAGGGTCACTATCAGTGGCTGAGTACGAGAGAAGGTATACTGAGCTATCACGGTATGCTGATGTTATAGTGGCATCTGAGAGTGACAGGTGTCGACGATTTGAAAGGGGATTACGTCCTGAGATACGAACCCCAGTCACAGGCATTGCAAAGTGGGCTGACTTTTCCCTGCTTGTAGAGAGTGGTCTACGTGTTGAGCAGAGTATAATAGAGGCACAAACAGTGGTGAAGCCTACTCGAGGGCCTTCAACGACGAGCAGTTTCCATGGTCGTGAGCAACGACGATTCACACATGGAGTGAATGTTTTGAGTCGTCAGGACTTTAAAAGTCGAGCTGGCGGCTAG

mRNA sequence

ATGAAGAAGTTATGGCTGTTTGAAAACAGGGCAGAAAATCTGAAAATGCTTGAAATTGGAAAGTGTGTTTTCTGTAGTTTTAAGGTTAAAAATCATGAGCTCGAGGTTCTTATGGTTGAGTTGGTTTGTTTGCCAGGCCAAGAGCAAATAGGTCAAGTTTACAAACCAAGCAATGTCTGTTGGTTTCATGCCTCTTTCCGGGCTAAGTTAGCAGAAGTCATGCCACCACGTACTAGCAAACGACGCAGGCAGGATCAGGGCAGGACACAGGATCCTACCCAAGGTCAATCTGAGAGGGGATCTAGTGCCCCGAGAGTCCAAACTGAGGCTAGAGATGAGCAACATGTTAGTTCTACACAGGAGTGGGCTGACTTTTCCCTGCTTGTAGAGAGTGGTCTACGTGTTGAGCAGAGTATAATAGAGGCACAAACAGTGGTGAAGCCTACTCGAGGGCCTTCAACGACGAGCAGTTTCCATGGTCGTGAGCAACGACGATTCACACATGGAGTGAATGTTTTGAGTCGTCAGGACTTTAAAAGTCGAGCTGGCGGCTAG

Coding sequence (CDS)

ATGAAGAAGTTATGGCTGTTTGAAAACAGGGCAGAAAATCTGAAAATGCTTGAAATTGGAAAGTGTGTTTTCTGTAGTTTTAAGGTTAAAAATCATGAGCTCGAGGTTCTTATGGTTGAGTTGGTTTGTTTGCCAGGCCAAGAGCAAATAGGTCAAGTTTACAAACCAAGCAATGTCTGTTGGTTTCATGCCTCTTTCCGGGCTAAGTTAGCAGAAGTCATGCCACCACGTACTAGCAAACGACGCAGGCAGGATCAGGGCAGGACACAGGATCCTACCCAAGGTCAATCTGAGAGGGGATCTAGTGCCCCGAGAGTCCAAACTGAGGCTAGAGATGAGCAACATGTTAGTTCTACACAGGAGTGGGCTGACTTTTCCCTGCTTGTAGAGAGTGGTCTACGTGTTGAGCAGAGTATAATAGAGGCACAAACAGTGGTGAAGCCTACTCGAGGGCCTTCAACGACGAGCAGTTTCCATGGTCGTGAGCAACGACGATTCACACATGGAGTGAATGTTTTGAGTCGTCAGGACTTTAAAAGTCGAGCTGGCGGCTAG

Protein sequence

MKKLWLFENRAENLKMLEIGKCVFCSFKVKNHELEVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLAEVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQEWADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG

Homology

[Close]

BLAST of Tan0008458 vs. NCBI nr
Match: KAA0056353.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 4.6e-17
Identity = 84/264 (31.82%), Postives = 97/264 (36.74%), Query Frame = 0


Query: 53  VYKPSNVCWFHASFRAKLAE---------VMPPRTSKRRRQDQGRTQDPTQGQSERGSSA 112
           + +  +VCW H  FRAK            VMPPRTSKR RQ+Q  TQDPTQGQSERGSS 
Sbjct: 35  IVRGDDVCWLHTVFRAKTTGVVREGVGQLVMPPRTSKRHRQNQDGTQDPTQGQSERGSST 94

Query: 113 PRVQTEARDEQHVSSTQE------------------------------------------ 172
           PR Q EA  E+   S QE                                          
Sbjct: 95  PRGQNEAGSERFSRSAQEIGRPEKAGPSDPEKMYGIERLKKLEATVFDGSTDLADAEVWR 154

Query: 173 ------------------------------------------------------------ 185
                                                                       
Sbjct: 155 NDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQESLSVVEYERKYAEMIVAFESDR 214

[Close]

BLAST of Tan0008458 vs. NCBI nr
Match: KAA0051980.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 98.2 bits (243), Expect = 7.8e-17
Identity = 83/267 (31.09%), Postives = 98/267 (36.70%), Query Frame = 0


Query: 52  QVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRV 111
           ++ +  NVCW HA F AK A      VMPPRTS+RRRQ+Q R QDPTQGQSERGSS PR 
Sbjct: 124 RIVRGDNVCWLHAVFWAKTAGGPGGGVMPPRTSRRRRQNQDRMQDPTQGQSERGSSTPRG 183

Query: 112 QTEARDEQHVSSTQE--------------------------------------------- 171
           Q EA  E+ V S QE                                             
Sbjct: 184 QNEAGSERFVRSAQEIGRSERARPSDPEKMYGIERLKELGATVFVGSTDLADAEVWHNDA 243

Query: 172 ------------------------------------------------------------ 185
                                                                       
Sbjct: 244 RTLDWQTFRGIFEEKYYPTTCCEAKRDEFLELKQGSLSVAKYKRKYTELSWYAEVIMASE 303

[Close]

BLAST of Tan0008458 vs. NCBI nr
Match: TYK27372.1 (uncharacterized protein E5676_scaffold325G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 6.6e-16
Identity = 85/272 (31.25%), Postives = 102/272 (37.50%), Query Frame = 0


Query: 35  EVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRT 94
           +V     VC  G      + +  +VC  HA F+AK A      VMPPRTS+RRRQ+Q  T
Sbjct: 194 DVRAASYVCWEGS---AGIVRGDDVCSIHAVFQAKTAGAPGGGVMPPRTSRRRRQNQDGT 253

Query: 95  QDPTQGQSERGSSAPRVQTEARDEQHVSSTQE---------------------------- 154
           QDPTQGQSE GSS PR Q EA  EQ   S QE                            
Sbjct: 254 QDPTQGQSESGSSTPRGQNEAGREQFARSAQEIGRPKKAEPSDREKMYEIERLKKLEATV 313

Query: 155 ------------------------------------------------------------ 185
                                                                       
Sbjct: 314 FDGSTDPADAETFIGIFEEKYYPTTYCEAKRDEFLELKQGLLSVAEYERKYTELLQYAEM 373

[Close]

BLAST of Tan0008458 vs. NCBI nr
Match: KAA0045180.1 (uncharacterized protein E6C27_scaffold30G001810 [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 6.6e-16
Identity = 85/272 (31.25%), Postives = 102/272 (37.50%), Query Frame = 0


Query: 35  EVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRT 94
           +V     VC  G      + +  +VC  HA F+AK A      VMPPRTS+RRRQ+Q  T
Sbjct: 220 DVRAASYVCWEGS---AGIVRGDDVCSIHAVFQAKTAGAPGGGVMPPRTSRRRRQNQDGT 279

Query: 95  QDPTQGQSERGSSAPRVQTEARDEQHVSSTQE---------------------------- 154
           QDPTQGQSE GSS PR Q EA  EQ   S QE                            
Sbjct: 280 QDPTQGQSESGSSTPRGQNEAGREQFARSAQEIGRPKKAEPSDREKMYEIERLKKLEATV 339

Query: 155 ------------------------------------------------------------ 185
                                                                       
Sbjct: 340 FDGSTDPADAETFIGIFEEKYYPTTYCEAKRDEFLELKQGLLSVAEYERKYTELLQYAEM 399

[Close]

BLAST of Tan0008458 vs. NCBI nr
Match: TYK00845.1 (zf-CCHC domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 3.3e-15
Identity = 67/177 (37.85%), Postives = 86/177 (48.59%), Query Frame = 0


Query: 53  VYKPSNVCWFHASFRAKL-------AEVMPPRTSKRR--RQDQGRTQDPTQGQSERGSSA 112
           + +  +VCW HA FRAK+              T+ ++  + + G       GQSERGSS 
Sbjct: 91  IVRGDDVCWLHAIFRAKIVGGPGGGVTTWSHATTYQQTTQAESGWDAGSYPGQSERGSST 150

Query: 113 PRVQTEARDEQHVSSTQE------------------------------------WADFSL 172
           PR Q EA  E+   S QE                                    W DFS 
Sbjct: 151 PRDQNEAGSERFARSAQEIGRQEKAWPSDPEKMCCRFERGLRFEIRTLVTVIAKWMDFSQ 210

Query: 173 LVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG 185
           LVE+ LRVEQSI+E ++ ++ +RG STTS   GREQRRFT GV+V   QDFK R+GG
Sbjct: 211 LVETALRVEQSIVEEKSAMELSRGVSTTSGIRGREQRRFTPGVSVSGCQDFKRRSGG 267

[Close]

BLAST of Tan0008458 vs. ExPASy TrEMBL
Match: A0A5A7UKD3 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G00860 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.2e-17
Identity = 84/264 (31.82%), Postives = 97/264 (36.74%), Query Frame = 0


Query: 53  VYKPSNVCWFHASFRAKLAE---------VMPPRTSKRRRQDQGRTQDPTQGQSERGSSA 112
           + +  +VCW H  FRAK            VMPPRTSKR RQ+Q  TQDPTQGQSERGSS 
Sbjct: 35  IVRGDDVCWLHTVFRAKTTGVVREGVGQLVMPPRTSKRHRQNQDGTQDPTQGQSERGSST 94

Query: 113 PRVQTEARDEQHVSSTQE------------------------------------------ 172
           PR Q EA  E+   S QE                                          
Sbjct: 95  PRGQNEAGSERFSRSAQEIGRPEKAGPSDPEKMYGIERLKKLEATVFDGSTDLADAEVWR 154

Query: 173 ------------------------------------------------------------ 185
                                                                       
Sbjct: 155 NDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQESLSVVEYERKYAEMIVAFESDR 214

[Close]

BLAST of Tan0008458 vs. ExPASy TrEMBL
Match: A0A5A7U9X4 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002130 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.8e-17
Identity = 83/267 (31.09%), Postives = 98/267 (36.70%), Query Frame = 0


Query: 52  QVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRV 111
           ++ +  NVCW HA F AK A      VMPPRTS+RRRQ+Q R QDPTQGQSERGSS PR 
Sbjct: 124 RIVRGDNVCWLHAVFWAKTAGGPGGGVMPPRTSRRRRQNQDRMQDPTQGQSERGSSTPRG 183

Query: 112 QTEARDEQHVSSTQE--------------------------------------------- 171
           Q EA  E+ V S QE                                             
Sbjct: 184 QNEAGSERFVRSAQEIGRSERARPSDPEKMYGIERLKELGATVFVGSTDLADAEVWHNDA 243

Query: 172 ------------------------------------------------------------ 185
                                                                       
Sbjct: 244 RTLDWQTFRGIFEEKYYPTTCCEAKRDEFLELKQGSLSVAKYKRKYTELSWYAEVIMASE 303

[Close]

BLAST of Tan0008458 vs. ExPASy TrEMBL
Match: A0A5D3DV36 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00500 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.2e-16
Identity = 85/272 (31.25%), Postives = 102/272 (37.50%), Query Frame = 0


Query: 35  EVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRT 94
           +V     VC  G      + +  +VC  HA F+AK A      VMPPRTS+RRRQ+Q  T
Sbjct: 194 DVRAASYVCWEGS---AGIVRGDDVCSIHAVFQAKTAGAPGGGVMPPRTSRRRRQNQDGT 253

Query: 95  QDPTQGQSERGSSAPRVQTEARDEQHVSSTQE---------------------------- 154
           QDPTQGQSE GSS PR Q EA  EQ   S QE                            
Sbjct: 254 QDPTQGQSESGSSTPRGQNEAGREQFARSAQEIGRPKKAEPSDREKMYEIERLKKLEATV 313

Query: 155 ------------------------------------------------------------ 185
                                                                       
Sbjct: 314 FDGSTDPADAETFIGIFEEKYYPTTYCEAKRDEFLELKQGLLSVAEYERKYTELLQYAEM 373

[Close]

BLAST of Tan0008458 vs. ExPASy TrEMBL
Match: A0A5A7TPS6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G001810 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.2e-16
Identity = 85/272 (31.25%), Postives = 102/272 (37.50%), Query Frame = 0


Query: 35  EVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLA-----EVMPPRTSKRRRQDQGRT 94
           +V     VC  G      + +  +VC  HA F+AK A      VMPPRTS+RRRQ+Q  T
Sbjct: 220 DVRAASYVCWEGS---AGIVRGDDVCSIHAVFQAKTAGAPGGGVMPPRTSRRRRQNQDGT 279

Query: 95  QDPTQGQSERGSSAPRVQTEARDEQHVSSTQE---------------------------- 154
           QDPTQGQSE GSS PR Q EA  EQ   S QE                            
Sbjct: 280 QDPTQGQSESGSSTPRGQNEAGREQFARSAQEIGRPKKAEPSDREKMYEIERLKKLEATV 339

Query: 155 ------------------------------------------------------------ 185
                                                                       
Sbjct: 340 FDGSTDPADAETFIGIFEEKYYPTTYCEAKRDEFLELKQGLLSVAEYERKYTELLQYAEM 399

[Close]

BLAST of Tan0008458 vs. ExPASy TrEMBL
Match: A0A5D3BNX1 (Zf-CCHC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00060 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.6e-15
Identity = 67/177 (37.85%), Postives = 86/177 (48.59%), Query Frame = 0


Query: 53  VYKPSNVCWFHASFRAKL-------AEVMPPRTSKRR--RQDQGRTQDPTQGQSERGSSA 112
           + +  +VCW HA FRAK+              T+ ++  + + G       GQSERGSS 
Sbjct: 91  IVRGDDVCWLHAIFRAKIVGGPGGGVTTWSHATTYQQTTQAESGWDAGSYPGQSERGSST 150

Query: 113 PRVQTEARDEQHVSSTQE------------------------------------WADFSL 172
           PR Q EA  E+   S QE                                    W DFS 
Sbjct: 151 PRDQNEAGSERFARSAQEIGRQEKAWPSDPEKMCCRFERGLRFEIRTLVTVIAKWMDFSQ 210

Query: 173 LVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG 185
           LVE+ LRVEQSI+E ++ ++ +RG STTS   GREQRRFT GV+V   QDFK R+GG
Sbjct: 211 LVETALRVEQSIVEEKSAMELSRGVSTTSGIRGREQRRFTPGVSVSGCQDFKRRSGG 267

The following BLAST results are available for this feature:

BLAST of Tan0008458 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0008458 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056353.1	4.6e-17	31.82	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0051980.1	7.8e-17	31.09	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 D...	[more]
TYK27372.1	6.6e-16	31.25	uncharacterized protein E5676_scaffold325G00500 [Cucumis melo var. makuwa]	[more]
KAA0045180.1	6.6e-16	31.25	uncharacterized protein E6C27_scaffold30G001810 [Cucumis melo var. makuwa]	[more]
TYK00845.1	3.3e-15	37.85	zf-CCHC domain-containing protein [Cucumis melo var. makuwa]	[more]

BLAST of Tan0008458 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKD3	2.2e-17	31.82	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7U9X4	3.8e-17	31.09	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3DV36	3.2e-16	31.25	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7TPS6	3.2e-16	31.25	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BNX1	1.6e-15	37.85	Zf-CCHC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Tan0008458 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008458.1	Tan0008458.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008233	peptidase activity