Tan0008458 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGTTATGGCTGTTTGAAAACAGGGCAGAAAATCTGAAAATGCTTGAAATTGGAAAGTGTGTTTTCTGTAGTTTTAAGGTTAAAAATCATGAGCTCGAGGTTCTTATGGTTGAGTTGGTTTGTTTGCCAGGCCAAGAGCAAATAGGTCAAGTTTACAAACCAAGGTTCTAATTCTAATACTGTGAGTGACTCTATTTTAGAATTATGACCTATGTTTTTCATCAAAAACATAATTGTTGATCATTGAATCTTGTTTGAACTAATTATGCATAGCTTCATGGAGTTTCTAACATAAAGTTCGTGATGGAACCTAAGCATGCTTTGAATTAGTTGTAACTATAAATCCAAGTATGGAAACTAAATTATGAAAGTATGCTTTCCTTTAGAGAATGTTTTGTGTAAATCCACTTGGGAACATGTTTAGATGATAATGTGAAAATGTCAAGAAATTGTTGTATGTGTTATAAAGACATGATTTCCATGGTACATAAATTATTCCCTTGTTTGTGGTTAACCCCTAATATTGAAGGACATTAGAGAGGTACTTAGGGGGGAATGAATAATGATATCCCGATACTGAAGGACAATGAGAAGGTATCCGGGTAGTAAATGGTTTTACTTTAATACTGAAGGACAATGAGAAGGTATTTGGGTAGTAAATGGTTTTACCTTAATACTGAAGGACATAGAGAAGGTATTAGGGAAAACCAAACGACCAAAGGTATTCCACGTGCACGTGAGAGAGAGGTATGAACCTTATTGGTATAAATGTAACTCTACCACCTCTATGGTTTGATGTGGTATCATATCATGTGTTTTATTGTTATGAGCTTCTATATTATTGATCTATCTACCCTCGATATGATAGTACATTTCGAGTTGTGTGCTATGCATAAGTGGTGACTTAAACCTGCAAATTGGAAGCATGGTTTGTTTATGTTTACAAACAAATGTTAAGGTATTTTCTACTTATAATCTGCCATTATTATGAATCACCTGTGAGCTTATAATGTTTTAAAGATAGACACTCACTGATCTTTTTAGCTCATTTTTTCAATGTTTTCAAACTTTTTCAGGTAGAGATCGAGCTCCTGGTACCTGACATCCTGCCATAGTCTGCTGGAAGTTTCATAAGTTGATAGTTTGTACGTGGCTGGTGTTGTATAGCAAGTCGTTATGTAGTTATAGTTGTTTGTACATAAAAGGTTGTATAAACAGTGGGTTAGCATTTTCTGAGTTGTGATGCTATTGCTCGTTTAAGTTTTCAAATGAGAGACTTAAGAAATGTTTCTTTCTATGTATGTTTAGTAGTTATCAAGTTTCCGCTGTGTTATGTTAAAGTTTACCACATACGAGCATAGTATCTTTATCAGGTAGAACAGGATTATCAGGTATTGATAAGAAGTGAGCAATGTCTGTTGGTTTCATGCCTCTTTCCGGGCTAAGTTAGCAGGTAGTTTGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAGCTCCATGGGAATGAGACAGGGCAAGTTAGCTCTGAGAATAAAGTAAAAAGTCATAACAAGTTATTGAGTTAGTTCAGATCAAACTAGTAGAGTATGGTCCAAGATAGGATAAGAGTAAGTCCAGTTAGGGCTAAAATGTGAATAGTAGTCTAGTGTTGTGTTATTGAGTTAAGTATTCATAGCATGTCTAATGTGTTGATATGTTATAGAAGTCATGCCACCACGTACTAGCAAACGACGCAGGCAGGATCAGGGCAGGACACAGGATCCTACCCAAGGTCAATCTGAGAGGGGATCTAGTGCCCCGAGAGTCCAAACTGAGGCTAGAGATGAGCAACATGTTAGTTCTACACAGGAGGCAGGTAGGCCAGAGAGAGTAAGGCCAAGTTATCCAAAAAAAAAAAAGGCATATAGAATAGAACGTCTGAAGAAATTAGGAGTCACAGTGTTTGATGGTTCCATAGATCCAACTGATGCTGAGATTTGGTTGAATATGTTAGAAAAATGATTTGATGTAATGAGTTGCCCTGAGGAGCAAAGTCAAGCTAGCCACATTCCTACTAGAGAAAGAAGCAGAGGGATGGTGGAAGTCAATACGAGCTAGGCACAGTGATGCACGCACTTTAGATTGGCAAACTTTCAGAGGCATATTTGAAGATAAGTATTACCCTGGCACATACCGCGAGGCGACGAGGAATGAATTTTTTGAATTGAAGCAAGGGTCACTATCAGTGGCTGAGTACGAGAGAAGGTATACTGAGCTATCACGGTATGCTGATGTTATAGTGGCATCTGAGAGTGACAGGTGTCGACGATTTGAAAGGGGATTACGTCCTGAGATACGAACCCCAGTCACAGGCATTGCAAAGTGGGCTGACTTTTCCCTGCTTGTAGAGAGTGGTCTACGTGTTGAGCAGAGTATAATAGAGGCACAAACAGTGGTGAAGCCTACTCGAGGGCCTTCAACGACGAGCAGTTTCCATGGTCGTGAGCAACGACGATTCACACATGGAGTGAATGTTTTGAGTCGTCAGGACTTTAAAAGTCGAGCTGGCGGCTAG ATGAAGAAGTTATGGCTGTTTGAAAACAGGGCAGAAAATCTGAAAATGCTTGAAATTGGAAAGTGTGTTTTCTGTAGTTTTAAGGTTAAAAATCATGAGCTCGAGGTTCTTATGGTTGAGTTGGTTTGTTTGCCAGGCCAAGAGCAAATAGGTCAAGTTTACAAACCAAGCAATGTCTGTTGGTTTCATGCCTCTTTCCGGGCTAAGTTAGCAGAAGTCATGCCACCACGTACTAGCAAACGACGCAGGCAGGATCAGGGCAGGACACAGGATCCTACCCAAGGTCAATCTGAGAGGGGATCTAGTGCCCCGAGAGTCCAAACTGAGGCTAGAGATGAGCAACATGTTAGTTCTACACAGGAGTGGGCTGACTTTTCCCTGCTTGTAGAGAGTGGTCTACGTGTTGAGCAGAGTATAATAGAGGCACAAACAGTGGTGAAGCCTACTCGAGGGCCTTCAACGACGAGCAGTTTCCATGGTCGTGAGCAACGACGATTCACACATGGAGTGAATGTTTTGAGTCGTCAGGACTTTAAAAGTCGAGCTGGCGGCTAG ATGAAGAAGTTATGGCTGTTTGAAAACAGGGCAGAAAATCTGAAAATGCTTGAAATTGGAAAGTGTGTTTTCTGTAGTTTTAAGGTTAAAAATCATGAGCTCGAGGTTCTTATGGTTGAGTTGGTTTGTTTGCCAGGCCAAGAGCAAATAGGTCAAGTTTACAAACCAAGCAATGTCTGTTGGTTTCATGCCTCTTTCCGGGCTAAGTTAGCAGAAGTCATGCCACCACGTACTAGCAAACGACGCAGGCAGGATCAGGGCAGGACACAGGATCCTACCCAAGGTCAATCTGAGAGGGGATCTAGTGCCCCGAGAGTCCAAACTGAGGCTAGAGATGAGCAACATGTTAGTTCTACACAGGAGTGGGCTGACTTTTCCCTGCTTGTAGAGAGTGGTCTACGTGTTGAGCAGAGTATAATAGAGGCACAAACAGTGGTGAAGCCTACTCGAGGGCCTTCAACGACGAGCAGTTTCCATGGTCGTGAGCAACGACGATTCACACATGGAGTGAATGTTTTGAGTCGTCAGGACTTTAAAAGTCGAGCTGGCGGCTAG MKKLWLFENRAENLKMLEIGKCVFCSFKVKNHELEVLMVELVCLPGQEQIGQVYKPSNVCWFHASFRAKLAEVMPPRTSKRRRQDQGRTQDPTQGQSERGSSAPRVQTEARDEQHVSSTQEWADFSLLVESGLRVEQSIIEAQTVVKPTRGPSTTSSFHGREQRRFTHGVNVLSRQDFKSRAGG Homology
BLAST of Tan0008458 vs. NCBI nr
Match: KAA0056353.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 99.0 bits (245), Expect = 4.6e-17 Identity = 84/264 (31.82%), Postives = 97/264 (36.74%), Query Frame = 0
BLAST of Tan0008458 vs. NCBI nr
Match: KAA0051980.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 98.2 bits (243), Expect = 7.8e-17 Identity = 83/267 (31.09%), Postives = 98/267 (36.70%), Query Frame = 0
BLAST of Tan0008458 vs. NCBI nr
Match: TYK27372.1 (uncharacterized protein E5676_scaffold325G00500 [Cucumis melo var. makuwa]) HSP 1 Score: 95.1 bits (235), Expect = 6.6e-16 Identity = 85/272 (31.25%), Postives = 102/272 (37.50%), Query Frame = 0
BLAST of Tan0008458 vs. NCBI nr
Match: KAA0045180.1 (uncharacterized protein E6C27_scaffold30G001810 [Cucumis melo var. makuwa]) HSP 1 Score: 95.1 bits (235), Expect = 6.6e-16 Identity = 85/272 (31.25%), Postives = 102/272 (37.50%), Query Frame = 0
BLAST of Tan0008458 vs. NCBI nr
Match: TYK00845.1 (zf-CCHC domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 92.8 bits (229), Expect = 3.3e-15 Identity = 67/177 (37.85%), Postives = 86/177 (48.59%), Query Frame = 0
BLAST of Tan0008458 vs. ExPASy TrEMBL
Match: A0A5A7UKD3 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G00860 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 2.2e-17 Identity = 84/264 (31.82%), Postives = 97/264 (36.74%), Query Frame = 0
BLAST of Tan0008458 vs. ExPASy TrEMBL
Match: A0A5A7U9X4 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002130 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 3.8e-17 Identity = 83/267 (31.09%), Postives = 98/267 (36.70%), Query Frame = 0
BLAST of Tan0008458 vs. ExPASy TrEMBL
Match: A0A5D3DV36 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00500 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 3.2e-16 Identity = 85/272 (31.25%), Postives = 102/272 (37.50%), Query Frame = 0
BLAST of Tan0008458 vs. ExPASy TrEMBL
Match: A0A5A7TPS6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G001810 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 3.2e-16 Identity = 85/272 (31.25%), Postives = 102/272 (37.50%), Query Frame = 0
BLAST of Tan0008458 vs. ExPASy TrEMBL
Match: A0A5D3BNX1 (Zf-CCHC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00060 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.6e-15 Identity = 67/177 (37.85%), Postives = 86/177 (48.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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