Tan0007863 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCGATCAAATCTCTAGTCTCGATATCAATTGTCGTTGCTCTTCTCTTGTTCTCTGAATCTCTAGCCACTTCCGCCGCCGTTCGCGGCAGCGCTTCGTCAAATTCTCTCACCGGAAAACTTCATCGGAACATCCTTCAGACGACCGTCGAGTCCTCCGTCGAACGGAAGATAAATGTTCATATCAAAAAGCGGATCCGATCTGGACGAGTTGGCGGCCCCCATAAATCGGCGGCGAATCGGAGCCGACTCGCCTCGTTTGGGGTTGGATCTGTGTTGTGTATCTGCACTTTTTTGGGATTGTTCTCCTGAATCATTTGTAAAATTTGGATTCTGTTTTTATTCATTCATTTATCTGATGAAAAATTAGTTTTTTTTTTGGATTCTGTTTCAACCTATCTCTTAGTCGAGAATATTTGTCTAAATCTTAACCAGTTGAAATATATGAAAGGATCGAATCTCATAGCAGAAGCGTCGTAATCGCTTGCTCACATTTACGTTGTGAAAGATGCACAAAAACAGAAAGTTAAACATGAAATAGGGGAAGAAGATGAAATTGCCTTTGAAGACACCTATTCTAGTGATCCTACTTTTACAAACAAGTACATATCATAAAACAATATAAGTTTGAGCATGTGTGGAAAACCTTTATGGAAATGAAAAACTTAAACGACACTTATTCAAGTTTCAAGTTTAAATGTATGAAATTGAAAGTTATGGTTGAAATTGATATAATCTATAAGTTTGAGGTTTAAATTGATTAAATTTAAAGGGGGAAAGGAACTGTTCAGAGATGATTTTGGTGAAATGACCGACCGGGAATCACATCTCAAATTTTACCTTCATAATATTCAATGGTCGAAATACCAAAATTGTCCCTCTATTTAAAAAGAAAATTTTCTCTAGCTCTCATTCTTTCTCTTGATTGCGTCATTTGGAGGCTCTATCGACTGGAGGATTTTCGCCATTGCTTCATCTTCATTCGTGATTGCTTGCTCGATTTCTCTCAGGTAGGTGTTATCTTCATCGTATTTGAGTTTTGGACTGGTTGAGTTTTGGATTTTCTTGTTATCTTCATCTGTGTTTGAGTTTGTTTACTGGTGCTTTTGTCGATTGTTGTTTTTGTTGTTTCGATTTGTCTTCAAGTGTTGCTTGAAGTGGGTTTGTTGTTGTTGTGATTTATTGGGTCATTCGTTAATTGATTTGTGATTTATTGCCTCCACCATGGACGAGTTGCAAGGAAATCAATGGTCGCAGAAGGTTTTGGAAAGTAAATTTGAAGGTATGAGTGGAATGGTTAGTTTTAAGAATAATGGCATATGGTCAAATATACCCACCTTCCAAATCATTAACGTTGTGGGTAAAAGCTATAAAGAGATTGCATTTTGGTCCCACCATTTGGATTCTCTGATAAAGTATCTCAAAAAACAAGCGGAGAACAAGTAGTATGATGGGGCCATAGGAGACTTCAGGATAGCTGCATATCGACTTAAGGAAATAAAAACAGAGCAAAGTGTAATCTCTTACCAACCCATTAGACAAATATTTTGCCATAAGTCCTATCAAGGAGATGCCATCTTTCTTTTTTTCTAATGGAAATAGGTCAAATAG ATGGCTGCGATCAAATCTCTAGTCTCGATATCAATTGTCGTTGCTCTTCTCTTGTTCTCTGAATCTCTAGCCACTTCCGCCGCCGTTCGCGGCAGCGCTTCGTCAAATTCTCTCACCGGAAAACTTCATCGGAACATCCTTCAGACGACCGTCGAGTCCTCCGTCGAACGGAAGATAAATGTTCATATCAAAAAGCGGATCCGATCTGGACGAGTTGGCGGCCCCCATAAATCGGCGGCGAATCGGAGCCGACTCGCCTCGTTTGGGGTTGGATCTGTCAAATAG ATGGCTGCGATCAAATCTCTAGTCTCGATATCAATTGTCGTTGCTCTTCTCTTGTTCTCTGAATCTCTAGCCACTTCCGCCGCCGTTCGCGGCAGCGCTTCGTCAAATTCTCTCACCGGAAAACTTCATCGGAACATCCTTCAGACGACCGTCGAGTCCTCCGTCGAACGGAAGATAAATGTTCATATCAAAAAGCGGATCCGATCTGGACGAGTTGGCGGCCCCCATAAATCGGCGGCGAATCGGAGCCGACTCGCCTCGTTTGGGGTTGGATCTGTCAAATAG MAAIKSLVSISIVVALLLFSESLATSAAVRGSASSNSLTGKLHRNILQTTVESSVERKINVHIKKRIRSGRVGGPHKSAANRSRLASFGVGSVK Homology
BLAST of Tan0007863 vs. NCBI nr
Match: KAG6575859.1 (hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014393.1 hypothetical protein SDJN02_24570, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 87.0 bits (214), Expect = 9.2e-14 Identity = 62/101 (61.39%), Postives = 75/101 (74.26%), Query Frame = 0
BLAST of Tan0007863 vs. NCBI nr
Match: KAG6593163.1 (hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 74.3 bits (181), Expect = 6.2e-10 Identity = 57/97 (58.76%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of Tan0007863 vs. NCBI nr
Match: KAA0068047.1 (protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no-on-transient A-like [Cucumis melo var. makuwa]) HSP 1 Score: 68.6 bits (166), Expect = 3.4e-08 Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 0
BLAST of Tan0007863 vs. NCBI nr
Match: KGN44886.1 (hypothetical protein Csa_015765 [Cucumis sativus]) HSP 1 Score: 66.6 bits (161), Expect = 1.3e-07 Identity = 56/101 (55.45%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of Tan0007863 vs. NCBI nr
Match: KAG7025561.1 (E3 ubiquitin-protein ligase MIEL1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 65.9 bits (159), Expect = 2.2e-07 Identity = 52/90 (57.78%), Postives = 63/90 (70.00%), Query Frame = 0
BLAST of Tan0007863 vs. ExPASy TrEMBL
Match: A0A5A7VLE5 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00010 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.6e-08 Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 0
BLAST of Tan0007863 vs. ExPASy TrEMBL
Match: A0A0A0KAQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 6.2e-08 Identity = 56/101 (55.45%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of Tan0007863 vs. ExPASy TrEMBL
Match: A0A5D3D3Y6 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001920 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.5e-06 Identity = 56/108 (51.85%), Postives = 66/108 (61.11%), Query Frame = 0
BLAST of Tan0007863 vs. ExPASy TrEMBL
Match: A0A1S3BT53 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo OX=3656 GN=LOC103492883 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.9e-05 Identity = 53/103 (51.46%), Postives = 62/103 (60.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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