Tan0006891 (gene) Snake gourd v1

Overview
NameTan0006891
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like
LocationLG11: 61484409 .. 61491819 (-)
RNA-Seq ExpressionTan0006891
SyntenyTan0006891
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAAACTTAAAAAACAAGTCCAAGGCTTAGGGGAAAAATGGTTGTTAGAGACAAAGGGTAATAACGTAATTTGGAGTAGTGACTGAGAAGCCTGAAAACGAAGGGGAGAAGGAGGAAGTGGCTATTTGTGTCCATCTTGGACGAGGAAAAGGAAATCAGAGCAGTCTGCAATGGCGAATAAGCCTTTGGGATCAACTGGAGAGTTCTTCAGGAGGAGAGACGAGTGGAGGAAGCATCCGATGCTCACAAATCAGTTCCGACACGCCACTCCTGGCCTCGGCATCGCCCTCGTCGCTTTCGGCATCTACCTTGTTGGCGAGCAAGTCTACAACAGGATCCATTCCCCTTCCTCTTCTCACCATCACCATGCCGATGCATCCTCCGCCACCCATTAACTGCTACCGGTGATTTCCCCAACTCTTCACTCCGATTTTCATTCTAATACTGGACGGAATCAATTTTGTTGTGTTTGATATCCATTTCCCCCCAATTTGTTTGTTTTCATCGAAAATTTTGTCACACTGTCATCCGAAGACAACGAAGGTGTTCTTTTCCTTTATGTTTCTAGGTCAAGTTTGCCTATTAAATCTTGATGCTGAAGAAATTCATCTCTTCCTAAATTTCGATGTGTGATTTTTTTTAAAAAGTATTGTGTAGCAATCTCTAGGATTGTAACTTCTGTATAATCTTTCGATGCTTTAGATCCGTCTTTCATCTTTACTTAGAAACTAATGGAGAAACCCAAAAATTTTCCTGTTGCTGATGATATTGAATTTGTTGGAAGTTTATCCTGATTAACTTTGATAATTATGTTGGTGTTTGTGGAGTGGAAGTCGTTTTTGTTTTTAGTAGTCTGTATCGGATATATAAATTAAGCCATGTGATATTTACTTCGAGTCTATCAATTTTATTATTCGTGTATTGCTCGTATCTTCGTTGTTACCCAAGAATAGACCTTGGTTCTTGTGTCTTTGTGGCTGGTGTATAGAAGTTCAACTGGATGTGCTACTTACACTGCGATTTAACTGTTTTGGAGTTTTGTATGAAGGAATCGAGCTTGTTCTGGTATTGTGTCTGCACCTACACGAGTATGGTCTCTGGTCCGTTCATTTGTCAAACCACTTCAAAAAGATGGAGCTTAGGAATAGCTGTCTAGAGTGCCAGTTTGAACTTTCCGTTACTTTGACAAAGCCCCACTATGTCAATTCCCCCAAATGATGAGGAGTTCTTCTGAAGAGTACGTCTATTAACTAAATAGATTGTTAGTTAGTTGAATAGTTGGATTAGTTGTAACTGATTTACAATGTAAATATTAGGGATTTCATGTATGTGTGAAGAGAATTAATGGCATTAATACAACTTTATCTCTTCCCTCAATAACACGTGTTATGGTATCAGAGCAAGAATTTGTTCTCTTACGTGTTATTTTTTTTACTGGTGGAAACGCCTAAATTCGTCTTCTTCTTTTCAACCCATGGCAAGTTCTCCTGTGCTCCGTGAAGGTCCAGCCATGGATGCGTCTGCTGTTGAAAATCAACTCAGCCCGTATATTCTTCATCACTCTGTAACTCCGACCGCTACTCTGGTCACTCAGCCACTTCTTGGCGTCGACAATTATATTTCATGGAGGAAGGCCATGATGCTTGCCCTGTCTGGCAAGAACAAACTGGGACTTGTCAACGGAGCGATCTAACGTTCCGATGGTTCCTTGGTTTCCGCTTGGCAGTGCAACAACGACATCATCGCTTCTTGGATCCTGAACTCCGTCTCAAAAGAAATTGCGGCCAATGTTGTCTACACAGGATGTGTTAAAGACCTTTGGGTTGAATTGAAGGAACAATATCGACAAACTAATGGTCCTTTATTAGCGAAGTGGTTGTGGCGTTTTCGCAATGAAACCTCCTCTCTTTGGAATAGGGTCATTGTGAGTAAGTATGAGGGTTCCCCTTTCCAGTGGATTAGTAGTAGGAGGAAAGGTACTCTTAGAAGTCCTTGGACCGGTATTGTGGAGGGCTTTCATTCTTTCTCTGGGCTTGTCCATTGTCGTGTGGGGAACGGGGAGGATACCTTTTTCTTGGAAGATAGGTGGTTGAGAAATAGTCCCCCCTGTTTGGCTTTTCCACGTCTTTATCATTTGTCTCGGTCTAAACATAAATCGGTGGCTGAGGTCTTATTTCATTCGGGTTCCCTTGCGTCTCCCTCTTTGGGTTTTCAACGTGCTTTGTCTGACAGGGAGACGTCTGATGTCTTGTCTCTCCTATCCTTAGTGGATGACCTTTTTTGTAGTCCGAAAAGGAAGGACGTCCGTTGCTGAGTCCTGATTCGATTGCGGGGTTTTCGTGTCGTTCCTTCTTCCTCACTTTGGCCAATCCTTCTTCCTCTACTTCACGGGGGGAGTCTGTCTTTGTCTTAGTTTGGAAGGTGAAAATCCCAAAGAAGGTTAAGTTTTTTGCTTGACAGGTTCTTCACGGAAGAGTCAATACTCTGGATAGGGTCTCGAGATGACTTTCGTCCTTGGTTGGTCCTTGGTGTTGCATTTTATGTAAGAGGGTGGCGGAGGATATCGACCATTTATTTTGGAGTTGTGAGTTGGCTCAGGATGTCTGGAGCCGTTTCGTCGGTGAGTTCGGACTTCCCTTTTCTAGAGGAGAAGGGACTTGTAGGGAGAGGCTGGAGGAGTTCCTTTTACATCCCCAGTTAGGGGGAAAGGAGCGTTTTTATGGAAGGCAGGGGTTTGTGTTGTCCTTTGGGGTCTCTGGGGAGAGAGAAATAATAGAATCTTTCGATGGCTAGAGTCTAAGAAGCACGAATACAGACACGGAGACGGACACGACACGGACACGGCGACACGCCAATTTCTTAAAATGTAGGACACGGACACGTTGAGGGACACGTTCTTTATTTTATTTTTTTTAGGTAATATATGTGTATATATATTGTTTTAGTTGAGAACAACCATGAAGAAACTGTTTTAAAAAACCCATAACGAAAAAAACACAACAAACCTTTGAAGGTTGGTGGCAACATACAACAGAAGTCGCCGGCGTCGGTAGCAGCGGAAGTCGCCGGCGAACTGGTTGTCGTTGGCGGGCTAGTGCGATTGCAAAGGAGCAGAGACTCAAGTTGGCGAAGGATTAGGGTTGCAGCTGCTGTTTTGTTTCTTTTTTTTATTATTATTTTTAACATCAAATTGGGCCAACTATTAAGTTGGGCCTCATTGGCTTTTTTTCTCTTTTAAAAGTGGTCAGCGTGTCCCTCAAGTGTCCTTAACGTGTCTTTAGAGTGTCCAAAATTAAAAAAAAAAGGACACAAAAAAATGCGTGTCGGACACGTGTCCGGAGCGTGTCCGTACATGTCCGTGTCCGATACAGACACATAGCCAAATATGAAGTGTCCGTGCTTCTTAGGTTGGAGCGTTCCTCCCTTGATTTTTGGACCCTTATTAGATTCTATGTTTCTCTCTGGGCCTCGGTTTCTAAGTTTTTTTGTAATTATCCTCTAGATTTTATTTTGCTTGGGTGGAGCGCTTTGTTGTAAGCTCCCCCTCTCTTTTGTGGGCTTGTGTTTTTTGTATGCCCTTGTATTCTTTCATTCTTTCTCAATGAAAGATTGATTTCTTATTAAAAAAAAAAAAAAATCCTCGAGTTTATCAGCTTCGTAAGAGTTTGGTTACGACAACTCAAGGTTTGTCATCCGTTGAAACTTATTATGCAAGAATTACGGCTATTTGGCGAGAATTAGTGGAGTATCGGCCTCTCGATAAATGTTCAGGAGACGGATTGAAGGATTTGATTGAATTTCTTGATTCTGAATTTGTGATGATATTTCTGATGGGCCTCAATGAGTCCTTCGCAACTATTCGAGCGCAGGTCTTGCTAATTCATTCGCTGCCTCCAATCAACAAGGTGTTCTCCCTTGTTGTCCAAGAAGAACATCAAAGATCACTTGGATCGGTGTTATCTCCAGTTGAGTCCGTAAGCCTACTCTTTCTAACGGATACTTCCAAAAGGAGCAATGATCGATCAAAGAAGAAGGATGGACAGAAGCCTATATGCAGTCATTGTGGAATTCGTGGCCATGTTGTTGATCGCTGCTATAAACTTCATGGTTACCCTCCGGTTATCGATCCAACAACAATAAATCACAGGCGCATTCCACAACTACTGGACAACAACATAGTGAAGACGGCTCTACCCGACTGGATTTCTTTGCTAGCCTGAGCACTACTCAATACTCGCAACTCATGGAGATGCTTCAATCACACGTGAATGTTCCCAAACTTGTTGATTCACACATATATGAAATCCCTCAGATATATATAAAGAATATTTACATTGTAAATCAGTTACAACTAATCCAACTATTCAACTAACTAACAATCTATTTAGTTAATAACGTCTAATAGAATGCATGCAGATAATATCTTTAACTGTAGGCAATTATATTTTCTCTGTGGTATTCTTCATTAGAAATAAATCATTAAAAGACCATTCTCTCTATCAAGTAACAAAGTCATATGGCTGACAATGTGTCTGGAGGTGCAAGGGACATCATTGGCATATGTGTCTTATCCCCTAAGTTCTTTCTGAATTTCCTACGAGGGAAATTATAGATGTAGGTATGAATAAGACCTATATATGTCTTATCCCAGAAATAGATAAGGTGAACAAGGTGAAAGACTTTTAAGTCCTTCAATCTTGTTACGAGTTTAAATAAGATTATAGCTAAAACCTTGGCCGATAGATTGAGGAAAGTCCTTCCTAGCACTATTTCCAACTTTATTGCAGGAAGGCAAATCTTATTCCAAGGGTTGATTGAGGAAAGTCCTTCCTAGCACTATTTCCAACTTTATTGCAGGAAGGAAAATCTTATTCCAAGGGTTGATTGCCAATGAAGCCATTGAGGACTATAGACAAAAAAAAAAAGGGAAAGGACAATTTTTAAGATCGACTTTAAGAAAGCTTATGACCATGTGGATTGAAAGTTTGTGGATAAAGTACTAGGGAAGAAGGGATTTGGGTTTCGGTGGAGATCCTGAATTTGGAATTATATTAGGTCGGTAAATTTTCCATCTTTGTCGATGGGAAACCTACAGGCAAGATCTTTGCTTCTAGGGGCTTAGGCAAGAGGATTCTCTATTGTCCCTTCTCTTTATCTTTTGGGTAGATATTCGAAGCGGGTTAGTGCCATTAGGAGTGGAGAAGGGATGGTAGAGGGGTTTAAGGTGGGAAAGGAGTTAATTCATCTACCACATCTGTAGTTATAGCGCACTCTTTTTCTTTTTGGACAGAAAAAATCATTTGTCTTAATGGTTTTTTGTCTTTCTTTGAAGTTATTTCTGATTGTAAGATTAATAGGGGCAAAAACTCCATTATAGGTTTAAATTTCTCTCTCTCAGTTGAGTTCTTTGGCTTCTTTGGTTGGATGTAAGGTGATTCAGTTCCCTTCCTCTTATCCAGGGCTTCCTTTGGGCGGTAATCCGAAGAGCCAGGCATTTTGGAATCTTGTTGTGGAAAAGATTCATAAACAATTATCTACATGGAAAATGGTTTTCTTCTCTAAAAGGAGGGAGACTTACTCTCATCCAATCGGTGTTGGGTTGGATTTCCAATTATTTCTTGTCTTTGTCTAGAATTCTTGTCTTAGTGAGCAAGAATATTGAAAGAGTGATGAGGAATTTCTTGTGGGAGGGGTCAATGGGGGGAGGGTCTCATGTGGTTAAGTGGGAGGTGGTGGTGAAGGCAGTGGAGCTAGGAGGATTAGGGATTGTGAGCTTGAGATTACGTAACGAGACTCTTCTAGCAAAATGGTTGTGGTGGTTCTTCATAGAGTCGATTGCTTTGTGGTACGGGGTTATTGTGAGTAGGTATACGCCCTTTTGAGTGAGTTTCAAGTGGTGGTTCCAAGGGCCACAGTAAAAAACTCTACAAAGCTATAGCCTTTGGATTCTCCTTCTCTTCTCAGTTTATGAATTGATTTGTTGGGGAAGGCTTGAAGATTTATTTTTGAGAGGATTGTTGGTGGGTGATAAGCCTCTTTATGTGTTTTTTTCACAGTGATACCATCTCTTGAATAAGAGTTTGCATTCAATGGCCTCAATATTTACTTCCTTAAATCCCTCTTCTTCGATTTCCTTATGGTTTATCGCCCTCTTCCTAATAGAGAGGCGACACAAGTAGTGATTGTTCTTTCCCTCCATAACCAGCAAGCGTATCCAAGAAGAAGGAATTTGGATATTTGGACCCCCAATACATCTGGAGGTTTCTCTTGCAATTCTTTTTTCCACATTTTGTCTACCTTTTCTCGGCCTCAAGCCGTCTTTGCTTTCTCCTCTATGTAGAAGGTTAAATTCCAAAGAAGGTCAAATTTTTCGAGTGGTCGGTTTTACATGGGAGAGAATACCATGGATTGTGTTCAAAGACACTCTTCCTTTGGGTTGTACCTGTTATGCGGCATTCTTTGGAGGGAACAAGAGGAGGACCTTGACCTTGTGTTATGGGGTTGCCAGTTTGCTCAATCCCTTTGGAGTTTGAGGATGAGCTCGTTTAGTTTGTTTGGCCCGGAGTAATATATGGTGAAGGAGGTGTGTCTGAGTTCTTCATTTCAAGAGAAGGGCAAAGGTTTGTGCATGTTAATTTCTTTGTCGTTTTGTGGGGCATTTGGCTTGAGAGAATAACAGGAACTTGGAGAGATCGTGTATGGAGGTTTGGGTGGCTTTTAGGTTTAATGCCTCCTTGTGAACATCAGTTACATGACTTTTCGTAAATATGAACTATGTTTTATTTCGTTGGGTTGAAGCCATTGGCTTTTTTTATGTGCTCTTTCATTTCCCAAAAAAAAAAAAAAAGTGAAACTTCCTTCCTTTACTATCTCTTCACTCTTAATTATTTGTAATCTGCAACTTATGTGACTAGTAGCTAATTTTGCAGATGCATTCCTGGTGCTGAATCTAAGCTTGGAGTTCTATAGCACTCATTCCCTTTTACCTTTTTTATGTGCAATAAAAGTAAAACTTTTACTGGACTGGACAAAGCGCTTTGATGAGGTTGTAAATGTACTTGATGAGGTTGGGATTGAAATTTCCATCAGAACTGAAATGTTTAATTTTATAATCTAGTGGTTCTAGCAATCCATTTTGCTCACAGTTGGTGATAAGATTTCTTTCTTATTGAATTTTTATTTACCATTGGTCCTTGAATGATCTCTTAACCGATATTGTTTCCCCTCCTAGTTAATGTGTAGCAAAATGATAACATAGTTGGAAACTAGAGTTGAGTTGGTGGAAGTAGTCTTGTATGCTTAATCTCCAGGAAGGTTATTGGTAGTGCTTTGCTTAGTTTAGTTGGAACATCAAGTTATTCATAATCACCAGCAAGGTCATTTGTTTGGATATATAATAGTGTCATTTGC

mRNA sequence

ATTAAACTTAAAAAACAAGTCCAAGGCTTAGGGGAAAAATGGTTGTTAGAGACAAAGGGTAATAACGTAATTTGGAGTAGTGACTGAGAAGCCTGAAAACGAAGGGGAGAAGGAGGAAGTGGCTATTTGTGTCCATCTTGGACGAGGAAAAGGAAATCAGAGCAGTCTGCAATGGCGAATAAGCCTTTGGGATCAACTGGAGAGTTCTTCAGGAGGAGAGACGAGTGGAGGAAGCATCCGATGCTCACAAATCAGTTCCGACACGCCACTCCTGGCCTCGGCATCGCCCTCGTCGCTTTCGGCATCTACCTTGTTGGCGAGCAAGTCTACAACAGGATCCATTCCCCTTCCTCTTCTCACCATCACCATGCCGATGCATCCTCCGCCACCCATTAACTGCTACCGATGCATTCCTGGTGCTGAATCTAAGCTTGGAGTTCTATAGCACTCATTCCCTTTTACCTTTTTTATGTGCAATAAAAGTAAAACTTTTACTGGACTGGACAAAGCGCTTTGATGAGGTTGTAAATGTACTTGATGAGGTTGGGATTGAAATTTCCATCAGAACTGAAATGTTTAATTTTATAATCTAGTGGTTCTAGCAATCCATTTTGCTCACAGTTGGTGATAAGATTTCTTTCTTATTGAATTTTTATTTACCATTGGTCCTTGAATGATCTCTTAACCGATATTGTTTCCCCTCCTAGTTAATGTGTAGCAAAATGATAACATAGTTGGAAACTAGAGTTGAGTTGGTGGAAGTAGTCTTGTATGCTTAATCTCCAGGAAGGTTATTGGTAGTGCTTTGCTTAGTTTAGTTGGAACATCAAGTTATTCATAATCACCAGCAAGGTCATTTGTTTGGATATATAATAGTGTCATTTGC

Coding sequence (CDS)

ATGGCGAATAAGCCTTTGGGATCAACTGGAGAGTTCTTCAGGAGGAGAGACGAGTGGAGGAAGCATCCGATGCTCACAAATCAGTTCCGACACGCCACTCCTGGCCTCGGCATCGCCCTCGTCGCTTTCGGCATCTACCTTGTTGGCGAGCAAGTCTACAACAGGATCCATTCCCCTTCCTCTTCTCACCATCACCATGCCGATGCATCCTCCGCCACCCATTAA

Protein sequence

MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSHHHHADASSATH
Homology
[Close]
BLAST of Tan0006891 vs. ExPASy Swiss-Prot
Match: Q9M9R9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B OS=Arabidopsis thaliana OX=3702 GN=At1g14450 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 8.0e-24
Identity = 48/71 (67.61%), Postives = 59/71 (83.10%), Query Frame = 0 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSH 63
          KPLG+TGEFFRRRDEWRKHPML+NQ RHA PGLGI + AF +YLVGEQ+YN+  +PS S 
Sbjct: 3  KPLGTTGEFFRRRDEWRKHPMLSNQMRHALPGLGIGVAAFCVYLVGEQIYNKALAPSKSS 62

Query: 64 HHHADASSATH 75
          HHH + ++ +H
Sbjct: 63 HHHQEQTAPSH 73

[Close]
BLAST of Tan0006891 vs. ExPASy Swiss-Prot
Match: O64725 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A OS=Arabidopsis thaliana OX=3702 GN=At2g02510 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-20
Identity = 43/62 (69.35%), Postives = 53/62 (85.48%), Query Frame = 0 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSH 63
          KPLG+TGEFFRRRDEWRKHPML+NQ RHA PG+GI + AF +YLVGEQ+Y+++ +PSS  
Sbjct: 3  KPLGTTGEFFRRRDEWRKHPMLSNQMRHALPGIGIGVGAFCVYLVGEQIYSKLMAPSSQS 62

Query: 64 HH 66
           H
Sbjct: 63 SH 64

[Close]
BLAST of Tan0006891 vs. NCBI nr
Match: XP_022974255.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita maxima])

HSP 1 Score: 154.8 bits (390), Expect = 2.8e-34
Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 1  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS 60
          MANKPLGSTGEFFRR DEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS
Sbjct: 1  MANKPLGSTGEFFRRTDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS 60

Query: 61 SSHHHHADASSATH 75
          SSHHHHADASSATH
Sbjct: 61 SSHHHHADASSATH 74

[Close]
BLAST of Tan0006891 vs. NCBI nr
Match: XP_022950932.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita moschata])

HSP 1 Score: 153.3 bits (386), Expect = 8.2e-34
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 1  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS 60
          MANKPLGSTGEFFRR DEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS
Sbjct: 1  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS 60

Query: 61 SSHHHHADASSATH 75
          SSHHHHADASSATH
Sbjct: 61 SSHHHHADASSATH 74

[Close]
BLAST of Tan0006891 vs. NCBI nr
Match: XP_008460580.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Cucumis melo] >XP_008460581.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Cucumis melo])

HSP 1 Score: 153.3 bits (386), Expect = 8.2e-34
Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS 60
          MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPS
Sbjct: 1  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS 60

Query: 61 SSHHHHADASSATH 75
          SSHHHH+DASSATH
Sbjct: 61 SSHHHHSDASSATH 74

[Close]
BLAST of Tan0006891 vs. NCBI nr
Match: XP_022933083.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita moschata] >XP_022998830.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita maxima] >XP_023530797.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita pepo subsp. pepo] >KAG7032435.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 152.5 bits (384), Expect = 1.4e-33
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 1  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS 60
          MANKPLGSTGEFFRRRDEWRKHP LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPS
Sbjct: 1  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPS 60

Query: 61 SSHHHHADASSATH 75
          SSHHHHADASSATH
Sbjct: 61 SSHHHHADASSATH 74

[Close]
BLAST of Tan0006891 vs. NCBI nr
Match: XP_038876540.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Benincasa hispida] >XP_038876541.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Benincasa hispida])

HSP 1 Score: 152.5 bits (384), Expect = 1.4e-33
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 1  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS 60
          MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPS
Sbjct: 1  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS 60

Query: 61 SSHHHHADASSATH 75
           SHHHHADASSATH
Sbjct: 61 PSHHHHADASSATH 74

[Close]
BLAST of Tan0006891 vs. ExPASy TrEMBL
Match: A0A6J1IDH2 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like OS=Cucurbita maxima OX=3661 GN=LOC111472888 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34
Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 1  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS 60
          MANKPLGSTGEFFRR DEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS
Sbjct: 1  MANKPLGSTGEFFRRTDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS 60

Query: 61 SSHHHHADASSATH 75
          SSHHHHADASSATH
Sbjct: 61 SSHHHHADASSATH 74

[Close]
BLAST of Tan0006891 vs. ExPASy TrEMBL
Match: A0A1S3CD83 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B OS=Cucumis melo OX=3656 GN=LOC103499369 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.0e-34
Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS 60
          MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPS
Sbjct: 1  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS 60

Query: 61 SSHHHHADASSATH 75
          SSHHHH+DASSATH
Sbjct: 61 SSHHHHSDASSATH 74

[Close]
BLAST of Tan0006891 vs. ExPASy TrEMBL
Match: A0A6J1GG90 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like OS=Cucurbita moschata OX=3662 GN=LOC111453875 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.0e-34
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 1  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS 60
          MANKPLGSTGEFFRR DEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS
Sbjct: 1  MANKPLGSTGEFFRRTDEWRKHPMLSNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS 60

Query: 61 SSHHHHADASSATH 75
          SSHHHHADASSATH
Sbjct: 61 SSHHHHADASSATH 74

[Close]
BLAST of Tan0006891 vs. ExPASy TrEMBL
Match: A0A6J1KDK9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like OS=Cucurbita maxima OX=3661 GN=LOC111493369 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.8e-34
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 1  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS 60
          MANKPLGSTGEFFRRRDEWRKHP LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPS
Sbjct: 1  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPS 60

Query: 61 SSHHHHADASSATH 75
          SSHHHHADASSATH
Sbjct: 61 SSHHHHADASSATH 74

[Close]
BLAST of Tan0006891 vs. ExPASy TrEMBL
Match: A0A6J1F3P5 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like OS=Cucurbita moschata OX=3662 GN=LOC111439786 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.8e-34
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 1  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPS 60
          MANKPLGSTGEFFRRRDEWRKHP LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPS
Sbjct: 1  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPS 60

Query: 61 SSHHHHADASSATH 75
          SSHHHHADASSATH
Sbjct: 61 SSHHHHADASSATH 74

[Close]
BLAST of Tan0006891 vs. TAIR 10
Match: AT1G14450.1 (NADH dehydrogenase (ubiquinone)s )

HSP 1 Score: 110.5 bits (275), Expect = 5.7e-25
Identity = 48/71 (67.61%), Postives = 59/71 (83.10%), Query Frame = 0 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSH 63
          KPLG+TGEFFRRRDEWRKHPML+NQ RHA PGLGI + AF +YLVGEQ+YN+  +PS S 
Sbjct: 3  KPLGTTGEFFRRRDEWRKHPMLSNQMRHALPGLGIGVAAFCVYLVGEQIYNKALAPSKSS 62

Query: 64 HHHADASSATH 75
          HHH + ++ +H
Sbjct: 63 HHHQEQTAPSH 73

[Close]
BLAST of Tan0006891 vs. TAIR 10
Match: AT2G02510.1 (NADH dehydrogenase (ubiquinone)s )

HSP 1 Score: 100.1 bits (248), Expect = 7.7e-22
Identity = 43/62 (69.35%), Postives = 53/62 (85.48%), Query Frame = 0 

Query: 4  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIHSPSSSH 63
          KPLG+TGEFFRRRDEWRKHPML+NQ RHA PG+GI + AF +YLVGEQ+Y+++ +PSS  
Sbjct: 3  KPLGTTGEFFRRRDEWRKHPMLSNQMRHALPGIGIGVGAFCVYLVGEQIYSKLMAPSSQS 62

Query: 64 HH 66
           H
Sbjct: 63 SH 64

The following BLAST results are available for this feature:
BLAST of Tan0006891 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M9R98.0e-2467.61NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B OS=Arabidopsis tha... [more]
O647251.1e-2069.35NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A OS=Arabidopsis tha... [more]
BLAST of Tan0006891 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022974255.12.8e-3498.65NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita ma... [more]
XP_022950932.18.2e-3497.30NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita mo... [more]
XP_008460580.18.2e-3497.30PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Cucumi... [more]
XP_022933083.11.4e-3397.30NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita mo... [more]
XP_038876540.11.4e-3397.30NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Benincasa hi... [more]
BLAST of Tan0006891 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IDH21.4e-3498.65NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like OS=Cucurbita ... [more]
A0A1S3CD834.0e-3497.30NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B OS=Cucumis melo OX... [more]
A0A6J1GG904.0e-3497.30NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like OS=Cucurbita ... [more]
A0A6J1KDK96.8e-3497.30NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like OS=Cucurbita ... [more]
A0A6J1F3P56.8e-3497.30NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like OS=Cucurbita ... [more]
BLAST of Tan0006891 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G14450.15.7e-2567.61NADH dehydrogenase (ubiquinone)s [more]
AT2G02510.17.7e-2269.35NADH dehydrogenase (ubiquinone)s [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012576NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3PFAMPF08122NDUF_B12coord: 15..66
e-value: 4.4E-8
score: 33.0
IPR012576NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3PANTHERPTHR15082NADH-UBIQUINONE OXIDOREDUCTASE B12 SUBUNITcoord: 3..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0006891.2Tan0006891.2mRNA
Tan0006891.1Tan0006891.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:0032981 mitochondrial respiratory chain complex I assembly
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005739 mitochondrion