Tan0006813 (gene) Snake gourd v1

Overview


Name	Tan0006813
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	CCHC-type domain-containing protein
Location	LG06: 33272362 .. 33273501 (+)
RNA-Seq Expression	Tan0006813
Synteny	Tan0006813

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGATCAGATAGATATCGAAAGGGTTGGATTTAACATATTCCTTTGCAAATTTAAATCGATGGGAGATAGACGGAAAATTTTGGAACAAGAACCTTGGTACTTCGACAAAGCTATCCTCCTTATCGATGAGCCAAGAGGAGCGTGTCGTTTCACTGATCACGAATTCCGGTATGTTTCTTTTTGGGTTCATATTCATAACTTACCTCCTGCAGGACAAGCAACGAAGATGACCCTGATATATGGCAACCGACTCGGGACTTTCCTTAAAGCTGATGTATCGGATTCGAAATTTATTTGGGGGAGCACGATGCGGATTCGAATTAGAGTGGACGTTTCTGAACCTCTAAAGAGAGGCTTGATGTTGAAAATCGGAGTGATGGCAGAAGACATGTGGTGTCCGATGACATATGGGAAGCTCCCTGATTTCTGTTATCAATGTGGACGAATCAGGCACATTGAGAGGGATTGTGGTTTCGAACCTGAGTTAGGGATGGGAGGTAAGCAGTATGGGCCCAACCTCAGACACTTGACCTCAAACTTTAGTCCTCAGCAAAACCACCGATCAAAAGTATCAGATTCGAGAGGAAGAGGACGAACAAGTCGAGGAAGAGGCGGGGTTACTGACCCGAGGAAGACAGTGGACAACGAGGCGACGGATAACCCAAACTGGAGCCCTGTCTCACCGATCCGAACCCAAAAGAATGGGGGTGAAGACCACACGACGAAAGCAGCAGATCGAGGATCGAGGAAGGAGATGGGCAGCGAGCCGGAGGATGGGCAGTTGTCCGACGACTTTCAGAGCATATTAAATGCTATTAATTTCTCTGTCTCAACGGAACCAAAGAAGGACGAAACGTCAGCGCATTCAAAGGGAACCCGAAAGATTCGGGCTGAGATTATTGAGGAGGTGAGGAGATCTTTACCCCTTGGAGACGAAAACGCCAAATCTGATGCTGTGAAATCAGGGGAAGCTTCTGGAACGAAGATTGAACGTGCGGGCCCCACCACTCCTAATGCTGGTAACGACAAAGAAGAAATGCTCGACAAATTCCTTGTGGGTGGGTTGGGATTCTCTCCAGATGCAGTAAATCCACCAATCTCAATGGACTCTGGGCCAAAAATTAAAATGGGCTAA

mRNA sequence

ATGACAGATCAGATAGATATCGAAAGGGTTGGATTTAACATATTCCTTTGCAAATTTAAATCGATGGGAGATAGACGGAAAATTTTGGAACAAGAACCTTGGTACTTCGACAAAGCTATCCTCCTTATCGATGAGCCAAGAGGAGCGTGTCGTTTCACTGATCACGAATTCCGGTATGTTTCTTTTTGGGTTCATATTCATAACTTACCTCCTGCAGGACAAGCAACGAAGATGACCCTGATATATGGCAACCGACTCGGGACTTTCCTTAAAGCTGATGTATCGGATTCGAAATTTATTTGGGGGAGCACGATGCGGATTCGAATTAGAGTGGACGTTTCTGAACCTCTAAAGAGAGGCTTGATGTTGAAAATCGGAGTGATGGCAGAAGACATGTGGTGTCCGATGACATATGGGAAGCTCCCTGATTTCTGTTATCAATGTGGACGAATCAGGCACATTGAGAGGGATTGTGGTTTCGAACCTGAGTTAGGGATGGGAGGTAAGCAGTATGGGCCCAACCTCAGACACTTGACCTCAAACTTTAGTCCTCAGCAAAACCACCGATCAAAAGTATCAGATTCGAGAGGAAGAGGACGAACAAGTCGAGGAAGAGGCGGGGTTACTGACCCGAGGAAGACAGTGGACAACGAGGCGACGGATAACCCAAACTGGAGCCCTGTCTCACCGATCCGAACCCAAAAGAATGGGGGTGAAGACCACACGACGAAAGCAGCAGATCGAGGATCGAGGAAGGAGATGGGCAGCGAGCCGGAGGATGGGCAGTTGTCCGACGACTTTCAGAGCATATTAAATGCTATTAATTTCTCTGTCTCAACGGAACCAAAGAAGGACGAAACGTCAGCGCATTCAAAGGGAACCCGAAAGATTCGGGCTGAGATTATTGAGGAGGTGAGGAGATCTTTACCCCTTGGAGACGAAAACGCCAAATCTGATGCTGTGAAATCAGGGGAAGCTTCTGGAACGAAGATTGAACGTGCGGGCCCCACCACTCCTAATGCTGGTAACGACAAAGAAGAAATGCTCGACAAATTCCTTGTGGGTGGGTTGGGATTCTCTCCAGATGCAGTAAATCCACCAATCTCAATGGACTCTGGGCCAAAAATTAAAATGGGCTAA

Coding sequence (CDS)

ATGACAGATCAGATAGATATCGAAAGGGTTGGATTTAACATATTCCTTTGCAAATTTAAATCGATGGGAGATAGACGGAAAATTTTGGAACAAGAACCTTGGTACTTCGACAAAGCTATCCTCCTTATCGATGAGCCAAGAGGAGCGTGTCGTTTCACTGATCACGAATTCCGGTATGTTTCTTTTTGGGTTCATATTCATAACTTACCTCCTGCAGGACAAGCAACGAAGATGACCCTGATATATGGCAACCGACTCGGGACTTTCCTTAAAGCTGATGTATCGGATTCGAAATTTATTTGGGGGAGCACGATGCGGATTCGAATTAGAGTGGACGTTTCTGAACCTCTAAAGAGAGGCTTGATGTTGAAAATCGGAGTGATGGCAGAAGACATGTGGTGTCCGATGACATATGGGAAGCTCCCTGATTTCTGTTATCAATGTGGACGAATCAGGCACATTGAGAGGGATTGTGGTTTCGAACCTGAGTTAGGGATGGGAGGTAAGCAGTATGGGCCCAACCTCAGACACTTGACCTCAAACTTTAGTCCTCAGCAAAACCACCGATCAAAAGTATCAGATTCGAGAGGAAGAGGACGAACAAGTCGAGGAAGAGGCGGGGTTACTGACCCGAGGAAGACAGTGGACAACGAGGCGACGGATAACCCAAACTGGAGCCCTGTCTCACCGATCCGAACCCAAAAGAATGGGGGTGAAGACCACACGACGAAAGCAGCAGATCGAGGATCGAGGAAGGAGATGGGCAGCGAGCCGGAGGATGGGCAGTTGTCCGACGACTTTCAGAGCATATTAAATGCTATTAATTTCTCTGTCTCAACGGAACCAAAGAAGGACGAAACGTCAGCGCATTCAAAGGGAACCCGAAAGATTCGGGCTGAGATTATTGAGGAGGTGAGGAGATCTTTACCCCTTGGAGACGAAAACGCCAAATCTGATGCTGTGAAATCAGGGGAAGCTTCTGGAACGAAGATTGAACGTGCGGGCCCCACCACTCCTAATGCTGGTAACGACAAAGAAGAAATGCTCGACAAATTCCTTGTGGGTGGGTTGGGATTCTCTCCAGATGCAGTAAATCCACCAATCTCAATGGACTCTGGGCCAAAAATTAAAATGGGCTAA

Protein sequence

MTDQIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRIRIRVDVSEPLKRGLMLKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPELGMGGKQYGPNLRHLTSNFSPQQNHRSKVSDSRGRGRTSRGRGGVTDPRKTVDNEATDNPNWSPVSPIRTQKNGGEDHTTKAADRGSRKEMGSEPEDGQLSDDFQSILNAINFSVSTEPKKDETSAHSKGTRKIRAEIIEEVRRSLPLGDENAKSDAVKSGEASGTKIERAGPTTPNAGNDKEEMLDKFLVGGLGFSPDAVNPPISMDSGPKIKMG

Homology

[Close]

BLAST of Tan0006813 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 149.8 bits (377), Expect = 4.6e-32
Identity = 75/250 (30.00%), Postives = 129/250 (51.60%), Query Frame = 0


Query: 4   QIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFW 63
           Q+ +E +G N+FL  F    D  ++++  PW+FDKA++++ +P  +   ++ EF  V+FW
Sbjct: 70  QLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFW 129

Query: 64  VHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRIRIRVDVSEPLKRGLML 123
           +H+ +LP +     M +  GN +G F+  D ++  F WG+++RIR+ +D+++PL+RG+ +
Sbjct: 130 IHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKI 189

Query: 124 KIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFE----PELGMGGKQYGPNLRHLT 183
            I       W P+ Y +LPDFCY CG I H   DC        +      +YGP LR + 
Sbjct: 190 NIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFVG 249

Query: 184 SNFSPQQNHRSKV---SDSRGRGRTSRGRGGVTDPRKTVDNEATDNPNWSPVSPIRTQKN 243
           S    Q+  + K     DS G    +    GV + ++ +  +   +   S  +  +T   
Sbjct: 250 SKAGAQKGRKGKSPAREDSCGSSSMNSKERGVEETKQQLSEQTNQDGFQSQAAAEQTGDA 309

Query: 244 GGEDHTTKAA 247
           GG    T  A
Sbjct: 310 GGRASATGCA 319

[Close]

BLAST of Tan0006813 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 145.6 bits (366), Expect = 8.8e-31
Identity = 69/171 (40.35%), Postives = 95/171 (55.56%), Query Frame = 0


Query: 7   IERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHI 66
           ++ +GFNIFL  F    DR +IL   PW FD+A+++ID P    +  D +FR VS WVH 
Sbjct: 74  VDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFRNVSLWVHF 133

Query: 67  HNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRIRIRVDVSEPLKRGLMLKIG 126
            +L  A     M    GN +G F   + + + F WGS +R+R+R DV +PL RG+ L + 
Sbjct: 134 FDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPLHRGIKLNLD 193

Query: 127 VMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCG-FEPELGMGGKQYGPNLR 177
                 W P+ Y +LPDF Y CGR+ HI +DC     +      QYGP LR
Sbjct: 194 GPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWLR 244

[Close]

BLAST of Tan0006813 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 139.4 bits (350), Expect = 6.3e-29
Identity = 75/215 (34.88%), Postives = 122/215 (56.74%), Query Frame = 0


Query: 8   ERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIH 67
           E +G NI++  FKS+ ++ ++L   PW F+K++L++  P    +  D  F + +FW+ IH
Sbjct: 71  EPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIH 130

Query: 68  NLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRIRIRVDVSEPLKRGLMLKIGV 127
           N+P    +T+M  I G +LG   + +   +    G  +R+R+++DVS+PL+RG+ LK   
Sbjct: 131 NIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLK-NS 190

Query: 128 MAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPEL--GMGGKQYGPNLRH--LTSNFS 187
             +D+WCP+ Y KLPDFCY+CG+I H  R+C    ++      +QYG  LR   L  + S
Sbjct: 191 DGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLRATLLKKSVS 250

Query: 188 PQQNHRSKVSDSRGRG-RTSRGRGGVTDPRKTVDN 218
             +          GRG + + GRGG  D R+  +N
Sbjct: 251 HPEEEVFWRGGRFGRGHQVNGGRGGRGDWRRRDEN 284

[Close]

BLAST of Tan0006813 vs. NCBI nr
Match: TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-28
Identity = 69/202 (34.16%), Postives = 112/202 (55.45%), Query Frame = 0


Query: 3   DQIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSF 62
           +++ +E +G NIF  +F++  DR++ILE  PW FDK +L++ E  G+ + TD +FRYV F
Sbjct: 68  NEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQFRYVPF 127

Query: 63  WVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRIRIRVDVSEPLKRGLM 122
           W+ +HNLP A    ++ L  G  +G   + D  +S    G  +RIR+ +DV  PLKRGL 
Sbjct: 128 WIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMNPLKRGLR 187

Query: 123 LKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPE--LGMGGKQYGPNLRHLTS 182
           + +G   +     + Y +LP+FCY CG+I H+ RDC    +        ++GP +R ++ 
Sbjct: 188 VALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSSFKFGPWMRAVSR 247

Query: 183 NFSPQQNHRSKVSDSRGRGRTS 203
             S     +    +    G +S
Sbjct: 248 TRSKGTGEKKNSPEGSREGGSS 269

[Close]

BLAST of Tan0006813 vs. NCBI nr
Match: XP_042961334.1 (uncharacterized protein LOC122296019 [Carya illinoinensis])

HSP 1 Score: 134.8 bits (338), Expect = 1.5e-27
Identity = 65/178 (36.52%), Postives = 98/178 (55.06%), Query Frame = 0


Query: 4   QIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFW 63
           ++  + VG N+FL +FK+  D+ +++   PW FDK +L I +  GA    D +F    FW
Sbjct: 71  RVAFKEVGRNMFLVEFKTKTDKTRVMNGRPWSFDKCLLCIQDCEGAKSVKDMQFCNEPFW 130

Query: 64  VHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRIRIRVDVSEPLKRGLML 123
           +  H++P AG +  M    GN LG  L  D + S+  WG  +R+++ +D+++PL RG   
Sbjct: 131 IQCHDMPFAGMSASMGERLGNSLGKVLTVDTNGSETCWGKFLRVKVMLDITKPLARGRF- 190

Query: 124 KIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPELGM-----GGKQYGPNLR 177
            I +  E  W P  Y +L +FCY CG I+H E  C  + E+G       GKQYG  LR
Sbjct: 191 -INMDGEKYWIPFRYERLNNFCYHCGAIKHGEGGCE-KLEVGQQAGVSSGKQYGAWLR 245

[Close]

BLAST of Tan0006813 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.3e-32
Identity = 75/250 (30.00%), Postives = 129/250 (51.60%), Query Frame = 0


Query: 4   QIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFW 63
           Q+ +E +G N+FL  F    D  ++++  PW+FDKA++++ +P  +   ++ EF  V+FW
Sbjct: 70  QLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFW 129

Query: 64  VHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRIRIRVDVSEPLKRGLML 123
           +H+ +LP +     M +  GN +G F+  D ++  F WG+++RIR+ +D+++PL+RG+ +
Sbjct: 130 IHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKI 189

Query: 124 KIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFE----PELGMGGKQYGPNLRHLT 183
            I       W P+ Y +LPDFCY CG I H   DC        +      +YGP LR + 
Sbjct: 190 NIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFVG 249

Query: 184 SNFSPQQNHRSKV---SDSRGRGRTSRGRGGVTDPRKTVDNEATDNPNWSPVSPIRTQKN 243
           S    Q+  + K     DS G    +    GV + ++ +  +   +   S  +  +T   
Sbjct: 250 SKAGAQKGRKGKSPAREDSCGSSSMNSKERGVEETKQQLSEQTNQDGFQSQAAAEQTGDA 309

Query: 244 GGEDHTTKAA 247
           GG    T  A
Sbjct: 310 GGRASATGCA 319

[Close]

BLAST of Tan0006813 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 4.2e-31
Identity = 69/171 (40.35%), Postives = 95/171 (55.56%), Query Frame = 0


Query: 7   IERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHI 66
           ++ +GFNIFL  F    DR +IL   PW FD+A+++ID P    +  D +FR VS WVH 
Sbjct: 74  VDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFRNVSLWVHF 133

Query: 67  HNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRIRIRVDVSEPLKRGLMLKIG 126
            +L  A     M    GN +G F   + + + F WGS +R+R+R DV +PL RG+ L + 
Sbjct: 134 FDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPLHRGIKLNLD 193

Query: 127 VMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCG-FEPELGMGGKQYGPNLR 177
                 W P+ Y +LPDF Y CGR+ HI +DC     +      QYGP LR
Sbjct: 194 GPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWLR 244

[Close]

BLAST of Tan0006813 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.0e-29
Identity = 75/215 (34.88%), Postives = 122/215 (56.74%), Query Frame = 0


Query: 8   ERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIH 67
           E +G NI++  FKS+ ++ ++L   PW F+K++L++  P    +  D  F + +FW+ IH
Sbjct: 71  EPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIH 130

Query: 68  NLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRIRIRVDVSEPLKRGLMLKIGV 127
           N+P    +T+M  I G +LG   + +   +    G  +R+R+++DVS+PL+RG+ LK   
Sbjct: 131 NIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLK-NS 190

Query: 128 MAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPEL--GMGGKQYGPNLRH--LTSNFS 187
             +D+WCP+ Y KLPDFCY+CG+I H  R+C    ++      +QYG  LR   L  + S
Sbjct: 191 DGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLRATLLKKSVS 250

Query: 188 PQQNHRSKVSDSRGRG-RTSRGRGGVTDPRKTVDN 218
             +          GRG + + GRGG  D R+  +N
Sbjct: 251 HPEEEVFWRGGRFGRGHQVNGGRGGRGDWRRRDEN 284

[Close]

BLAST of Tan0006813 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.8e-29
Identity = 69/202 (34.16%), Postives = 112/202 (55.45%), Query Frame = 0


Query: 3   DQIDIERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSF 62
           +++ +E +G NIF  +F++  DR++ILE  PW FDK +L++ E  G+ + TD +FRYV F
Sbjct: 68  NEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQFRYVPF 127

Query: 63  WVHIHNLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRIRIRVDVSEPLKRGLM 122
           W+ +HNLP A    ++ L  G  +G   + D  +S    G  +RIR+ +DV  PLKRGL 
Sbjct: 128 WIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMNPLKRGLR 187

Query: 123 LKIGVMAEDMWCPMTYGKLPDFCYQCGRIRHIERDCGFEPE--LGMGGKQYGPNLRHLTS 182
           + +G   +     + Y +LP+FCY CG+I H+ RDC    +        ++GP +R ++ 
Sbjct: 188 VALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSSFKFGPWMRAVSR 247

Query: 183 NFSPQQNHRSKVSDSRGRGRTS 203
             S     +    +    G +S
Sbjct: 248 TRSKGTGEKKNSPEGSREGGSS 269

[Close]

BLAST of Tan0006813 vs. ExPASy TrEMBL
Match: A0A6P9ESA8 (uncharacterized protein LOC108982770 OS=Juglans regia OX=51240 GN=LOC108982770 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.4e-26
Identity = 69/210 (32.86%), Postives = 106/210 (50.48%), Query Frame = 0


Query: 8   ERVGFNIFLCKFKSMGDRRKILEQEPWYFDKAILLIDEPRGACRFTDHEFRYVSFWVHIH 67
           + VG N FL + K   D+++I++  PW FDK ++ + +  G   + + +F++  FWV  H
Sbjct: 42  KEVGRNKFLVELKEKADKKRIMQGRPWSFDKNLICLQDCEGHESWKEMQFQHEPFWVQCH 101

Query: 68  NLPPAGQATKMTLIYGNRLGTFLKADVSDSKFIWGSTMRIRIRVDVSEPLKRGLMLKIGV 127
           +LP AG      L  G  +   L  D  DS   WGS +R+R+ +D+++PL RG  L +G 
Sbjct: 102 DLPFAGMNANTGLNLGKSMEEVLMVDTDDSGVCWGSFLRLRVMIDLTKPLARGRFLTLG- 161

Query: 128 MAEDMWCPMTYGKLPDFCYQCGRIRHIERDCG----FEPELGMGGKQYGPNLRHLTSNFS 187
                W P  Y +LP+FCY CG+I+H+   C      +  L    +QYG  LR    +F 
Sbjct: 162 -NAKYWIPFKYERLPNFCYHCGKIKHVTGMCDQLDRGKASLEGFNQQYGAWLRTSQKSFF 221

Query: 188 PQQNHRSKVSDSRGRGRTSRGRGGVTDPRK 214
            +         S+ R  T +GR    D RK
Sbjct: 222 AE--------GSQSRRETDQGRKSGHDQRK 241

The following BLAST results are available for this feature:

BLAST of Tan0006813 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0006813 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156185.1	4.6e-32	30.00	uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha...	[more]
XP_022132681.1	8.8e-31	40.35	uncharacterized protein LOC111005481 [Momordica charantia]	[more]
XP_022149484.1	6.3e-29	34.88	uncharacterized protein LOC111017902 [Momordica charantia]	[more]
TXG54013.1	1.4e-28	34.16	hypothetical protein EZV62_019269 [Acer yangbiense]	[more]
XP_042961334.1	1.5e-27	36.52	uncharacterized protein LOC122296019 [Carya illinoinensis]	[more]

BLAST of Tan0006813 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU55	2.3e-32	30.00	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1BSZ1	4.2e-31	40.35	uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1D765	3.0e-29	34.88	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5C7H9Y2	6.8e-29	34.16	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926...	[more]
A0A6P9ESA8	2.4e-26	32.86	uncharacterized protein LOC108982770 OS=Juglans regia OX=51240 GN=LOC108982770 P...	[more]

BLAST of Tan0006813 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 2..109 e-value: 1.3E-13 score: 50.7
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 111..158 e-value: 5.2E-8 score: 32.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..259
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 10..172
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 10..172
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 145..158 score: 9.158235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0006813.1	Tan0006813.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding