Tan0006780 (gene) Snake gourd v1

Overview


Name	Tan0006780
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	GRF1-interacting factor 1-like
Location	LG08: 3623603 .. 3630034 (+)
RNA-Seq Expression	Tan0006780
Synteny	Tan0006780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCCTTTTCTCCTTACAGAGAGAAAAAAAAAAAAAAAAAAACTTTTGCTCTGTTCCTTAGAGAGGGAAACAATAGCATCTTTGTAGAGAGAAAAAAACAGAGAGAGAGAAAGCGCTTCTGTTGGCCACAAAGAAAGCCAAAACGGCTGCACCAGCTCCAGAATTCCCCAAAACCCCTTTTCTTTCTCTCTCTTTCGCTCATAAAACACTTTCTGTTTGAATAATTTGCAGAAGCTCTTATACCTCCCTCTGTCACTATCACCGTCCAAAACCTCTCTCTCTCTCTCTCACTCTATACTTCAAACCAAAGAAGAACAGAAACAGAAGAGCAAAAAAAAGCATCTCCTCTAGAGAGAGAATCAGCCGTTTCTGTGAAAACCCATCATTCATTTCTCACAAATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCAGCCTATTATCCCAACAACGTCACTACTGATCACATTCAACAGGTTCTTCTTCTTCTTCCTTTCTTTTATTTGGGTTTTTTAATCAATCAATCTTGTTACTCCAATCCCATTTGGTGATTTTCATTCATTCCCCCTTTTCTTTCATATGGGTTTTCTTTGTTTTTCATGTTAGAGATGAATGCCTTTCTTCTTTTTTTTTAAACTATTGGGTTTAATTCTGCTTTTCCTCTTTCACGTGCCCTTGTCTCTATTGAATGATTTTATTATCTTATTGCTTAAGGTGAGACCAGTCCATCTATGGCTTTTCTCTTGTTTATTTCCATCTCTCTTTTCCTGATTAAGTATTTGTTTCCATATTGGTCAAAGGTTAATTACTGTTTTTTTTTCCAATTGCATGATTGACTTCTGCCTTTTGGCCTTAATCTTAATGGAAAAGGAATCAAAACTGGTTGAATGGTGGCTTTTTTACGCTTTTTTTTTCTCTATGTCAATCAAGTGGGAAAAAAGTGGCTCATGAAGCAGTTGAGAGCTTCAGCTTAGTTTAGATACTTGAAATCTCCCAGATACAGTGGCATATTGGGATATGAAACAGTTGGGAGCTTGAGCTCTTTGAGGACTATAAGTTTCAGTTCTTATAGATTAGGATTGGTATATTGATTAATCTTTTTTTCCTTTTTCTGGTTGAGTTTTTAATGTTATCACTTGACACTTACATGAGCATATTGGAAGTTTAAATCTCAATTCAATGTTTTGCACTTTATGTCCTTTGATGTTGGTCTAAACTTGTTGTAAATGAATGTACCATATAGACATAGAAGTCCTTAAGTGTGTTTCCTAACTTATATTATATCATACTTGATATTCGGGTATGGTCCAATATCCTTATAACCCACCTTATGTTCTTCGCCTACCTAAGATATTAAAATTCCACGGCTTTTTTGAGAATAAAATATTATAGGGATCAAGTTGTTGTCATATGAGACTAGCCGAGGTACGGCTAAGTTGTTGTCATATGAGACTAGTTGAGGTACGGGTAAGTTCGTCCAAACCGTCACATATATTTTTTTTTTTAAAAAGTATTTTCTCTTTTCATTAGCTTTTTGGTAGAGAAAAAATGTGGTGTGACGTAATAAGTTGAAAAATATTCATGTGCTGATATTTGGACAAAATATCACATTGAAGTATTAAACTGATGAGGATAATGCAAGTCTTTTCCTAGTTTGACATTTCTTGTTGGAACTTTTTTAACGGTTCTGTGATGAACTATGATGAGGATAATGTAAAAGTTAATCTATATAAGTTGAGAAGTATAAAATGTTTATATATTATTTTTTATCATGGCTAAGATGGAAGACAGAAGCTTAAATAGTGATTGGTCAACCATGAAACAGTATTATAAGTTGCTGTCTGGTTCTGATTCTTTCAAGTTGCTTTCAAGGATCATAAAATTTCAGCACATGTTTTTTAAGGTTTATGATGTCTGATCAATCAAATCAAATAATGTTTAGGATATGTATTTGTAGATTCTGCACAAATTTAGTGGTTTCAAGATTTTTTTGAATTTCCAAAATAATCTATTCCTTTTTCAAGAATGATTTGTTAAACGAGTTAATAAGTGGGTCATTTTCTTTAAAGACTGCCTTGTGTTGATTTTTTTTTTCTTTTCTTTTCTTTGCTGTCTATTTTTGAAAACCAGTACTATAGTTCTGTAAATTTTCACCACAATGGTGATTTTCGTCAACTTATTAACTTGACTAGTTTCCATTTTATGGATAACCGTAACAACTTCTTATTTGGTAATCTATGTTGCAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAGAGCCAAAACTCAGGAAAATTGAATGAATGTGCAGAGTAAGAATCAATGGTTTTTCTAGTGACTCTGCTTACCACAAATGATTGCTATTGCTTCCATTCATTGTCAATTCTTTCTATGGAAGTGACTTTTTCCCCTTGCACTTGTTCGTAAATGGTCCTCTTTGCCTCTCTCTATGATCTTCGCTCCACTTCTTGTTTAGCTGTATAATTCAGTGTTTGCCTATCACTCTTTAAGTAACTCTCATAATGTGACTTTTCTTTTTCAGTTTAATCTATTAGGTTCTAGGATGAAGAAACATGGATTTCGATATCTAATCTCAGGAAAATGTAGTTCCAGTATTGTTTAAACAGAGTTTTGATGGGGTAAAACAGGGTTCTTTTGGAGGTTTTCTTTGGTAATAATCCTCCCTGATTGAACTGCTGAGGTTAGCGTTCCTGTCTGCTTGATCATTGTTGTTCTTGATTCAGATTCATAGTGATCACAGTTCTACTTGAGTGAATAACAATGTTCATGGATGAAAAATGGAATGATATCTAATCATTCACCAAATATTTGATTTCTGAATCGGACGCAGGAAAGATACCATCATAGGATTTTCTTTGAAAAGAAACCAAAAAATTGGTTGTTAAAGTAGGCCTGCCTATATCTATGCAGTTAGAACTTATCCATCTTCCATAAAGGATTGGAGTAACGTCAATGTTCGTCGATTGGTTTGATCAAGTGATGAAACGATGTCAACTGTAGTCCATGGCCTTCAAGACTGACAATAGGGGATTTGATTCATGCTCTTGTATTCTTAGACTTGATATCGATACTGAAGAAGAAGGTTTTGAAGTGCAAAAGTAACTCTCTTGCCTTTTTTGCTGCAGGAATCAAGCAAGGCTACAGAGGAACCTTATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGGTATGAACATAGTGTTGGGTTTTGACAATATATTAGAAGGAAAATTGTCCTACATCTGAAAGGTTTAGGAAAGTGATGAATTGTCCTACACCTGAAAGGTTTAGGAAAGTGATGAATTGTCCTACACCTGAAAGGTTTAGGAAAGTGATGGGCTCCTGGCACTATAAAAGGAGTCTATGGCTTTGGTTTCAAAGCATCCCAGTTAGAAACACTTTAAACTTGGTGTACTAGCTCTAGGTAAATTCCCTCTTTATATTCTCTGGTCTGAGAGTGGGAAGAAGGGTGTGAGTGGTATAGAGTTTTGGGAGAGTGTTTTTGTAATTGGGGTCGGGGAGAGAATTCTATGTGATTGTAACAATTTTTCACATAGTGGAATTTCTTTCTGTTCGTGGTTTTTTTCTCCGGGTTTGGAGTTTTTTCACGTAAATTCTTGTGTCTCTTATTTTGTTGGTATCTTTTAATTTCTCAGTTTATTTCTGCTTATTCCTAGTGGTGGGAGGTTTTTTTTTCCCAACAAGTGGTATCAGAGCTTTAGGTTTGTAGTTTCTTGAGTTTCTGAGTATGCTCTGTGGTTGCAGCATTGTCTGAGTTTCCACATCAGAAAAGATTTCTTGAAACGGGTTATAGTTGTTCACTATTTGCAGATTCACTAGGAGGGAAGTAGATATGTCAAGCTTTATGAGTCCGATAAAGATTGATGTGGAGAAATTTGACGGAAAGATGAACTTTGGCTTGTGGCAAGTGCAAGTCAAAGATGTGCTGATGCAATTTGGGTTACACAAGGATTTGAAGGGAAGACCAAGTTGTGGTGTTCCTGAAAAGTTAAGCGGTGATGGTGATCCAACGGAGTCCCGTGGTGGTTCCAAAGAAAGATTCTAAGAATTCCAACATGACAGTGGGAATTGGAAGAAGAAGAAGAAGAAAGACTTCGTGCAAAAGAAAGATTGCTGGGAAGACAGGCGATATGGACACATGAAAAAGAATTGTCCTAACAGAGCAAGTTCGTCAAAAGGCTCTGGGTCGGATGCTAACATGGTCTCTTTCGTCAGGGGAGATGGTGACATCTTCTGAAGAAAGACAGAATTCATCCTTATGGTATGTCCGCTTTGCCATGATAGAGGATGTGATGTTAGCGGTTCAACAAGTTTGCACACGGGCATTGACTTGGCGGCTATGCAGGGTGTGTGGTGGAAGTTATGTCGATGGCTGAAGAACTTCCGGGTGAGCCAAGTAGGTGGAAGTTGCACCATAAATTTCAGCTGGGTATATCGGCATGTGACGAAAAAGAAAAGTCTTGGGAGGTGGCATTCCAAGTGGTCTACTTTTATGGTGGAGTAGGTTATAGTTCTCTGTGTTGAGAATTATGATTGTCGGTAAAGACAATGATGCAGCAAGAGATGTGGATTCTTCAAATATCTTGTCAAGGTGGAAATTGTTGGGTTTTGACAATATATTAGAAGGAAAATTGTCCTACATCTGAAAGGTTTAGGAAAGTGATGAATTGTCCTACACACCGAAAGGTTTAGGAAAGTGATGAATTGTCCTACACCGAAAGGTTTAGGAAAGTGATGGGCTCTCAGCACTATAAAAGGAGTCTATGGCTTTGGTTTCAAAGCATCCCAGTTAGAAACACTTTAAACTTGGTGTACTAGCTCTAGGTAAATTCCCTCTTTATATTCTCTGGTCTGAGAGTGGGAAGAAAGGTGTGAGTGGTATAGAGTTTTGGGAGAGTGTTTTTGTAATTGGGGTCGGGGAGAGAATTCTATGTGATTGTAACAATTTTTCACATAGTGGAATTTCTTTCTGTTCGTGGTTTTTTTCTCCGGGTTTGGAGTTTTTTCCACGTAAATTCTTGTGTCTCTTATTTTGTTGGTATCTTTTAATTTCTCAGTTTATTTCTGCTTATTCCTAGTGGTGGGAGGTTTTTTTTTCCCAACACATAGTTGTTTCAAGATGTAAATTTATCCGATCGCTAGCTGCACATAGTTAGACAAAGGATATTGCTGATAGTTTAATACCCTGTTATTTTGCTTTCAAGAAAAACTCTTGGCCATAATAACCATTTCCATTTCATTCATTTTTCTGCAACACCCTTTGACAACGACCACGGTTGCAATTTGGAACCGTCGTGCTTCAAGGCCCTTAGCCTCTGGATTTAGTTGTGCTTGGTTTGGCATATGTAAGATATTTAGCATTCTCTAATATCTCAAAACCTTCATTTTTGTTAGTTCTGAATTCTTAGATATAATCTTTTATTTTCTTATGATAACCAAATCGTACGTTAAAGGCTCCACTCCTTCATTTATGCTCATGGTTCACCTCACTAATCACTAGGAAGGCTTTGCCTACCCTAGAATCAATCAGGAGCGATAATAAAAATTTAAGTTATTTAAATTATAGATTTAGGTGCTTGAACCTATAGACTTATGAAGGTATATTCAAACATGTCAAAGTCTTCATCTTTTCTTAGCTTTCTTTTTCTTTTTCTTATTACCTTCAAACTAATTGAATTGAAATTCATCCAAGATGCTTTGCTTTTGCCCTGTTTCCTCCAGTACTCTTCCAGTGGCATAATCCAACCAGGAGGACATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCGCAATCGCTGATGGCTGCTCGGTCCTCCATGTTGTACACTCAGCAGCCATTTTCGACCCTGCAGCAGCAAGCTTTGCACAGCCAACTCGGAATGAGCTCCGGAGGAGGCATAGGATTCAACATGCTACAAAATGAGGCTGCCAATGCAGGAGGCAATGGAGGAGCACTCGGAGGAGGAGGCTTCCCAGATTTCGGCCACAACAGTGCAGGAGACAGCTTGCACCGGAGCCTAGCCGGTGGGAGCAAGCAAGATATGGGGGGAACCGGGTCTGTCGAGGGACGAGGAGGGAGCTCCGGTAGCCATGGCGGTGATGGAGGTGAGACTCTCTACTTGAAATCAGCTGATGATGGGAACTGAAAGTATGGGAATAAACTAGCCTTATTCAGTGAGTTGAAGGTAGAAAAGTAGGTGGATAGAAATTAGGAAGATAAAAGAAGAGAAGAAACCTTCTTACTGAAAAGAAGTTGCTTTATCTTATGTGCAAACAATGGTACGAGGATTCAAGCCTCATAAAACTTTGACCTTTGGTGTTCTTTTTCCATGTTAAGATATGTATTTG

mRNA sequence

CACCCTTTTCTCCTTACAGAGAGAAAAAAAAAAAAAAAAAAACTTTTGCTCTGTTCCTTAGAGAGGGAAACAATAGCATCTTTGTAGAGAGAAAAAAACAGAGAGAGAGAAAGCGCTTCTGTTGGCCACAAAGAAAGCCAAAACGGCTGCACCAGCTCCAGAATTCCCCAAAACCCCTTTTCTTTCTCTCTCTTTCGCTCATAAAACACTTTCTGTTTGAATAATTTGCAGAAGCTCTTATACCTCCCTCTGTCACTATCACCGTCCAAAACCTCTCTCTCTCTCTCTCACTCTATACTTCAAACCAAAGAAGAACAGAAACAGAAGAGCAAAAAAAAGCATCTCCTCTAGAGAGAGAATCAGCCGTTTCTGTGAAAACCCATCATTCATTTCTCACAAATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCAGCCTATTATCCCAACAACGTCACTACTGATCACATTCAACAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAGAGCCAAAACTCAGGAAAATTGAATGAATGTGCAGAGAATCAAGCAAGGCTACAGAGGAACCTTATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGTACTCTTCCAGTGGCATAATCCAACCAGGAGGACATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCGCAATCGCTGATGGCTGCTCGGTCCTCCATGTTGTACACTCAGCAGCCATTTTCGACCCTGCAGCAGCAAGCTTTGCACAGCCAACTCGGAATGAGCTCCGGAGGAGGCATAGGATTCAACATGCTACAAAATGAGGCTGCCAATGCAGGAGGCAATGGAGGAGCACTCGGAGGAGGAGGCTTCCCAGATTTCGGCCACAACAGTGCAGGAGACAGCTTGCACCGGAGCCTAGCCGGTGGGAGCAAGCAAGATATGGGGGGAACCGGGTCTGTCGAGGGACGAGGAGGGAGCTCCGGTAGCCATGGCGGTGATGGAGGTGAGACTCTCTACTTGAAATCAGCTGATGATGGGAACTGAAAGTATGGGAATAAACTAGCCTTATTCAGTGAGTTGAAGGTAGAAAAGTAGGTGGATAGAAATTAGGAAGATAAAAGAAGAGAAGAAACCTTCTTACTGAAAAGAAGTTGCTTTATCTTATGTGCAAACAATGGTACGAGGATTCAAGCCTCATAAAACTTTGACCTTTGGTGTTCTTTTTCCATGTTAAGATATGTATTTG

Coding sequence (CDS)

ATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCAGCCTATTATCCCAACAACGTCACTACTGATCACATTCAACAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAGAGCCAAAACTCAGGAAAATTGAATGAATGTGCAGAGAATCAAGCAAGGCTACAGAGGAACCTTATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGTACTCTTCCAGTGGCATAATCCAACCAGGAGGACATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCGCAATCGCTGATGGCTGCTCGGTCCTCCATGTTGTACACTCAGCAGCCATTTTCGACCCTGCAGCAGCAAGCTTTGCACAGCCAACTCGGAATGAGCTCCGGAGGAGGCATAGGATTCAACATGCTACAAAATGAGGCTGCCAATGCAGGAGGCAATGGAGGAGCACTCGGAGGAGGAGGCTTCCCAGATTTCGGCCACAACAGTGCAGGAGACAGCTTGCACCGGAGCCTAGCCGGTGGGAGCAAGCAAGATATGGGGGGAACCGGGTCTGTCGAGGGACGAGGAGGGAGCTCCGGTAGCCATGGCGGTGATGGAGGTGAGACTCTCTACTTGAAATCAGCTGATGATGGGAACTGA

Protein sequence

MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQPFSTLQQQALHSQLGMSSGGGIGFNMLQNEAANAGGNGGALGGGGFPDFGHNSAGDSLHRSLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGETLYLKSADDGN

Homology

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BLAST of Tan0006780 vs. ExPASy Swiss-Prot
Match: Q8L8A5 (GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.6e-62
Identity = 156/240 (65.00%), Postives = 171/240 (71.25%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSS--GIIQ--PGGHYIQHQQA---QQMTPQSLMAARS 120
           NLMYLAAIADSQPQP ++H+QY S+  G+IQ   G HY+Q QQA   QQMT QSLMAARS
Sbjct: 61  NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARS 120

Query: 121 SMLYT-----QQPFSTLQQQAL-HSQLGMSS----GGGIGFNMLQNEAANAGGNGGALGG 180
           SMLY      QQP++TLQ Q L HSQLGMSS    GG  G ++LQ EA            
Sbjct: 121 SMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGEA------------ 180

Query: 181 GGFPDFGHNSAGDSLHRSLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGETLYLKSADDGN 224
           GGF DFG                K +MG  G  EGRGGSS    GDGGETLYLKS+DDGN
Sbjct: 181 GGFHDFGR--------------GKPEMGSGGGGEGRGGSS----GDGGETLYLKSSDDGN 210

[Close]

BLAST of Tan0006780 vs. ExPASy Swiss-Prot
Match: Q6AVI1 (GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.2e-40
Identity = 124/236 (52.54%), Postives = 147/236 (62.29%), Query Frame = 0


Query: 2   QQHLMQM-QPMMAAY-YPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQ 61
           QQHLMQM Q MM  Y  P  VTTD IQQYLDENK LIL I+++QN+GK+ ECA NQA+LQ
Sbjct: 3   QQHLMQMNQGMMGGYASPTTVTTDLIQQYLDENKQLILAILDNQNNGKVEECARNQAKLQ 62

Query: 62  RNLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQ 121
            NLMYLAAIADSQP  +A  +QY S+ ++Q G  Y+  Q AQ M PQSLMAARSSM+Y Q
Sbjct: 63  HNLMYLAAIADSQPPQTAAMSQYPSNLMMQSGARYMPQQSAQMMAPQSLMAARSSMMYAQ 122

Query: 122 QPFSTLQQQ------ALHSQLGMSSGGGI-GFNMLQNEAANAGGNGGA------LGGGGF 181
              S LQQQ      A H QLGM SGG   GF++L  EA+  GG GG       +  G F
Sbjct: 123 PALSPLQQQQQQQAAAAHGQLGMGSGGTTSGFSILHGEASMGGGGGGGGAGNSMMNAGVF 182

Query: 182 PDFGHNSAGDSLHRSLAGGSKQDMGGTG-SVEGRGGSSGSHGGDGGETLYLKSADD 222
            DFG         R   GG K+  G T  SV+ RG +SG+  GDG    YLK  ++
Sbjct: 183 SDFG---------RGGGGGGKE--GSTSLSVDVRGANSGAQSGDGE---YLKGTEE 224

[Close]

BLAST of Tan0006780 vs. ExPASy Swiss-Prot
Match: A5HEH4 (GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.5e-36
Identity = 121/232 (52.16%), Postives = 146/232 (62.93%), Query Frame = 0


Query: 2   QQHLMQM-QPMMAAY-YPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQ 61
           QQHLMQM Q MM  Y  P  VTTD IQQYLDENK LIL I+++QN+GK  EC  +QA+LQ
Sbjct: 3   QQHLMQMNQNMMGGYTSPAAVTTDLIQQYLDENKQLILAILDNQNNGKAEECERHQAKLQ 62

Query: 62  RNLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQ 121
            NLMYLAAIADSQP  +A  +QY S+ ++QPG  Y+  Q  Q M PQSLMAARSSM+Y  
Sbjct: 63  HNLMYLAAIADSQPPQTAPLSQYPSNLMMQPGPRYMPPQSGQMMNPQSLMAARSSMMYAH 122

Query: 122 QPFSTL-QQQALHSQLGMSSGGG-----IGFNMLQNEAANAGGNGGALGGGGFPDFGHNS 181
              S L QQQA H QLGM+ GGG      GF++L  EA+  GG  GA  G    + G  S
Sbjct: 123 PSLSPLQQQQAAHGQLGMAPGGGGGGTTSGFSILHGEASMGGGGAGAGAGNNMMNAGMFS 182

Query: 182 AGDSLHRSLAGGSKQDMGGTG-SVEGRGG-SSGSHGGDGGETLYLKSADDGN 224
                 RS   GS    G T  SV+ RGG SSG+  GD GE L + + ++G+
Sbjct: 183 ---GFGRS---GSGAKEGSTSLSVDVRGGTSSGAQSGD-GEYLKVGTEEEGS 227

[Close]

BLAST of Tan0006780 vs. ExPASy Swiss-Prot
Match: Q9MAL9 (GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.1e-19
Identity = 80/183 (43.72%), Postives = 105/183 (57.38%), Query Frame = 0


Query: 2   QQHLMQMQPMMAAYYP-NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 61
           QQ   QM PM+ +  P NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQK 62

Query: 62  NLMYLAAIADSQPQP--------SAMHAQYSS--SGIIQPGGHYIQHQQAQQMTPQSLMA 121
           NLMYLAAIAD+QP P        +A+ AQ ++  SG +QP  +++QH QA   +P  + A
Sbjct: 63  NLMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSG-MQPPSYFMQHPQA---SPAGIFA 122

Query: 122 AR-----SSMLYTQQPFSTLQ--QQALHSQLGMSSGGGIGFNM---LQNEAANAGGNGGA 164
            R      S L  Q P    Q  QQA+   +G+   G     M   +Q      GGN G 
Sbjct: 123 PRGPLQFGSPLQFQDPQQQQQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGGNVGL 181

[Close]

BLAST of Tan0006780 vs. ExPASy Swiss-Prot
Match: Q93VH6 (GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.0e-18
Identity = 87/238 (36.55%), Postives = 118/238 (49.58%), Query Frame = 0


Query: 3   QHLMQMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 62
           Q   QM PM+   +P  NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 2   QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61

Query: 63  NLMYLAAIADSQPQP-------SAMHAQY---SSSGIIQPGGHYIQHQQA---QQMTPQS 122
           NLMYLAAIAD+QPQP        AM  Q    + S +  P  +++Q  QA    Q  P  
Sbjct: 62  NLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPPG 121

Query: 123 LMAARSSMLYTQ-----QPFSTLQQQALHSQ-----LGMSSGGGIGFNMLQNEAANAGGN 182
           +   R  + +        P   L QQA+        +G+++  G+   M  +E A A  N
Sbjct: 122 IFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETALAANN 181

Query: 183 GGA--LGGGGFPDFGHNSAGDSLHRSLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGET 214
            G     GGG PD                G+     G    +G+GGS+  HGG   +T
Sbjct: 182 AGPNDASGGGKPD----------------GTNMSQSG---ADGQGGSAARHGGGDAKT 220

[Close]

BLAST of Tan0006780 vs. NCBI nr
Match: XP_022965913.1 (GRF1-interacting factor 1-like [Cucurbita maxima])

HSP 1 Score: 407.9 bits (1047), Expect = 5.6e-110
Identity = 216/223 (96.86%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSTLQQQALHSQLGMSSGGGIGFNMLQNEAANAGGNGGALGGGGFPDFGHNSAGDSLHR 180
           PFS+LQQQALHSQLGMSSGGGIGFNMLQN+AANAGGNGGALGGGGFPDF HN+A DSLHR
Sbjct: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGFPDFSHNAAADSLHR 180

Query: 181 SLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGETLYLKSADDGN 224
           SLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 SLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 223

[Close]

BLAST of Tan0006780 vs. NCBI nr
Match: XP_022937932.1 (GRF1-interacting factor 1-like [Cucurbita moschata])

HSP 1 Score: 403.3 bits (1035), Expect = 1.4e-108
Identity = 216/224 (96.43%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSTLQQQALHSQLGMSSGGGIGFNMLQNEAANAGGNGGAL-GGGGFPDFGHNSAGDSLH 180
           PFS+LQQQALHSQLGMSSGGGIGFNMLQN+AANAGGNGGAL GGGGFPDF HN+A DSLH
Sbjct: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGGFPDFSHNAAADSLH 180

Query: 181 RSLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGETLYLKSADDGN 224
           RSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of Tan0006780 vs. NCBI nr
Match: XP_023538061.1 (GRF1-interacting factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 401.7 bits (1031), Expect = 4.0e-108
Identity = 215/224 (95.98%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSTLQQQALHSQLGMSSGGGIGFNMLQNEAANAGGNGGAL-GGGGFPDFGHNSAGDSLH 180
           PFS+LQQQALHSQLGMSSGGGIGFNMLQN+AANAGGNGGAL GGGGFPDF HN+A DSLH
Sbjct: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGGFPDFSHNAAADSLH 180

Query: 181 RSLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGETLYLKSADDGN 224
           RSLAGGSKQDMGG+GS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of Tan0006780 vs. NCBI nr
Match: XP_004139249.1 (GRF1-interacting factor 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 399.4 bits (1025), Expect = 2.0e-107
Identity = 214/224 (95.54%), Postives = 218/224 (97.32%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSTLQQQALHSQLGMSSGGGIGFNMLQNEAANA-GGNGGALGGGGFPDFGHNSAGDSLH 180
           PFSTLQQQALH QLGMSSGGGIGFNMLQN+AANA GGNGGALGGGGFPDFGH +A DSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGETLYLKSADDGN 224
           RSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of Tan0006780 vs. NCBI nr
Match: KAG6586325.1 (GRF1-interacting factor 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 398.7 bits (1023), Expect = 3.4e-107
Identity = 214/228 (93.86%), Postives = 219/228 (96.05%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSTLQQQALHSQLGMSSGGGIGFNMLQNEAANAGGNGGAL-----GGGGFPDFGHNSAG 180
           PFS+LQQQALHSQLGM+SGGGIGFNMLQN+AANAGGNGGAL     GGGGFPDF HN+A 
Sbjct: 121 PFSSLQQQALHSQLGMTSGGGIGFNMLQNDAANAGGNGGALGGGGGGGGGFPDFSHNAAA 180

Query: 181 DSLHRSLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGETLYLKSADDGN 224
           DSLHRSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGE LYLKSADDGN
Sbjct: 181 DSLHRSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGENLYLKSADDGN 228

[Close]

BLAST of Tan0006780 vs. ExPASy TrEMBL
Match: A0A6J1HQC1 (GRF1-interacting factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111465656 PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.7e-110
Identity = 216/223 (96.86%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSTLQQQALHSQLGMSSGGGIGFNMLQNEAANAGGNGGALGGGGFPDFGHNSAGDSLHR 180
           PFS+LQQQALHSQLGMSSGGGIGFNMLQN+AANAGGNGGALGGGGFPDF HN+A DSLHR
Sbjct: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGFPDFSHNAAADSLHR 180

Query: 181 SLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGETLYLKSADDGN 224
           SLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 SLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 223

[Close]

BLAST of Tan0006780 vs. ExPASy TrEMBL
Match: A0A6J1FCK8 (GRF1-interacting factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444175 PE=3 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 6.6e-109
Identity = 216/224 (96.43%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120

Query: 121 PFSTLQQQALHSQLGMSSGGGIGFNMLQNEAANAGGNGGAL-GGGGFPDFGHNSAGDSLH 180
           PFS+LQQQALHSQLGMSSGGGIGFNMLQN+AANAGGNGGAL GGGGFPDF HN+A DSLH
Sbjct: 121 PFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGGFPDFSHNAAADSLH 180

Query: 181 RSLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGETLYLKSADDGN 224
           RSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSGEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of Tan0006780 vs. ExPASy TrEMBL
Match: A0A0A0LL92 (SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010170 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.6e-108
Identity = 214/224 (95.54%), Postives = 218/224 (97.32%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSTLQQQALHSQLGMSSGGGIGFNMLQNEAANA-GGNGGALGGGGFPDFGHNSAGDSLH 180
           PFSTLQQQALH QLGMSSGGGIGFNMLQN+AANA GGNGGALGGGGFPDFGH +A DSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAANAGGGNGGALGGGGFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGETLYLKSADDGN 224
           RSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of Tan0006780 vs. ExPASy TrEMBL
Match: A0A1S3C305 (GRF1-interacting factor 1 OS=Cucumis melo OX=3656 GN=LOC103496282 PE=3 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.8e-107
Identity = 213/224 (95.09%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYSNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGMIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQ 120

Query: 121 PFSTLQQQALHSQLGMSSGGGIGFNMLQNEAANA-GGNGGALGGGGFPDFGHNSAGDSLH 180
           PFSTLQQQALH QLGMSSGGGIGFNMLQN+A NA GGNGGALGGGGFPDFGH +A DSLH
Sbjct: 121 PFSTLQQQALHGQLGMSSGGGIGFNMLQNDAGNAGGGNGGALGGGGFPDFGHGAASDSLH 180

Query: 181 RSLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGETLYLKSADDGN 224
           RSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Sbjct: 181 RSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN 224

[Close]

BLAST of Tan0006780 vs. ExPASy TrEMBL
Match: A0A6J1CPL3 (GRF1-interacting factor 1 OS=Momordica charantia OX=3673 GN=LOC111013134 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.4e-103
Identity = 207/225 (92.00%), Postives = 215/225 (95.56%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQ 120
           NLMYLAAIADSQPQPSAMHAQYSSSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ
Sbjct: 61  NLMYLAAIADSQPQPSAMHAQYSSSGLMQPGGHYLQHQQAQQMTPQSLMAARSSMLYPQQ 120

Query: 121 PFSTL-QQQALHSQLGMSSGGGIGFNMLQNEAANA-GGNGGALGGGGFPDFGHNSAGDSL 180
            FS L QQQALHSQLGMSSGGGIGFNMLQN+ +NA GGNGGALG GGFPDFGH++AGDSL
Sbjct: 121 QFSALQQQQALHSQLGMSSGGGIGFNMLQNDTSNAGGGNGGALGAGGFPDFGHSAAGDSL 180

Query: 181 HRSLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGETLYLKSADDGN 224
           HR LAGGSKQDMG TGS EGRGGSSGSHGGDGGETLYLK+ADDGN
Sbjct: 181 HRGLAGGSKQDMGATGSAEGRGGSSGSHGGDGGETLYLKAADDGN 225

[Close]

BLAST of Tan0006780 vs. TAIR 10
Match: AT5G28640.1 (SSXT family protein )

HSP 1 Score: 240.0 bits (611), Expect = 1.9e-63
Identity = 156/240 (65.00%), Postives = 171/240 (71.25%), Query Frame = 0


Query: 1   MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 60
           MQQHLMQMQPMMA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQR
Sbjct: 1   MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60

Query: 61  NLMYLAAIADSQPQPSAMHAQYSSS--GIIQ--PGGHYIQHQQA---QQMTPQSLMAARS 120
           NLMYLAAIADSQPQP ++H+QY S+  G+IQ   G HY+Q QQA   QQMT QSLMAARS
Sbjct: 61  NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARS 120

Query: 121 SMLYT-----QQPFSTLQQQAL-HSQLGMSS----GGGIGFNMLQNEAANAGGNGGALGG 180
           SMLY      QQP++TLQ Q L HSQLGMSS    GG  G ++LQ EA            
Sbjct: 121 SMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGEA------------ 180

Query: 181 GGFPDFGHNSAGDSLHRSLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGETLYLKSADDGN 224
           GGF DFG                K +MG  G  EGRGGSS    GDGGETLYLKS+DDGN
Sbjct: 181 GGFHDFGR--------------GKPEMGSGGGGEGRGGSS----GDGGETLYLKSSDDGN 210

[Close]

BLAST of Tan0006780 vs. TAIR 10
Match: AT1G01160.1 (GRF1-interacting factor 2 )

HSP 1 Score: 95.9 bits (237), Expect = 4.4e-20
Identity = 80/183 (43.72%), Postives = 105/183 (57.38%), Query Frame = 0


Query: 2   QQHLMQMQPMMAAYYP-NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 61
           QQ   QM PM+ +  P NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQK 62

Query: 62  NLMYLAAIADSQPQP--------SAMHAQYSS--SGIIQPGGHYIQHQQAQQMTPQSLMA 121
           NLMYLAAIAD+QP P        +A+ AQ ++  SG +QP  +++QH QA   +P  + A
Sbjct: 63  NLMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSG-MQPPSYFMQHPQA---SPAGIFA 122

Query: 122 AR-----SSMLYTQQPFSTLQ--QQALHSQLGMSSGGGIGFNM---LQNEAANAGGNGGA 164
            R      S L  Q P    Q  QQA+   +G+   G     M   +Q      GGN G 
Sbjct: 123 PRGPLQFGSPLQFQDPQQQQQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGGNVGL 181

[Close]

BLAST of Tan0006780 vs. TAIR 10
Match: AT4G00850.1 (GRF1-interacting factor 3 )

HSP 1 Score: 93.2 bits (230), Expect = 2.8e-19
Identity = 87/238 (36.55%), Postives = 118/238 (49.58%), Query Frame = 0


Query: 3   QHLMQMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQR 62
           Q   QM PM+   +P  NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+
Sbjct: 2   QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61

Query: 63  NLMYLAAIADSQPQP-------SAMHAQY---SSSGIIQPGGHYIQHQQA---QQMTPQS 122
           NLMYLAAIAD+QPQP        AM  Q    + S +  P  +++Q  QA    Q  P  
Sbjct: 62  NLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPPG 121

Query: 123 LMAARSSMLYTQ-----QPFSTLQQQALHSQ-----LGMSSGGGIGFNMLQNEAANAGGN 182
           +   R  + +        P   L QQA+        +G+++  G+   M  +E A A  N
Sbjct: 122 IFPPRGPLQFGSPHQFLDPQQQLHQQAMQGHMGIRPMGLNNNNGLQHQMHHHETALAANN 181

Query: 183 GGA--LGGGGFPDFGHNSAGDSLHRSLAGGSKQDMGGTGSVEGRGGSSGSHGGDGGET 214
            G     GGG PD                G+     G    +G+GGS+  HGG   +T
Sbjct: 182 AGPNDASGGGKPD----------------GTNMSQSG---ADGQGGSAARHGGGDAKT 220

[Close]

BLAST of Tan0006780 vs. TAIR 10
Match: AT1G01160.2 (GRF1-interacting factor 2 )

HSP 1 Score: 78.6 bits (192), Expect = 7.2e-15
Identity = 80/217 (36.87%), Postives = 105/217 (48.39%), Query Frame = 0


Query: 2   QQHLMQMQPMMAAYYP-NNVTTDHIQQ--------------------------------- 61
           QQ   QM PM+ +  P NN+TT+ IQ+                                 
Sbjct: 3   QQQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWL 62

Query: 62  -YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQP--------SAM 121
            YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QP P        +A+
Sbjct: 63  DYLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAV 122

Query: 122 HAQYSS--SGIIQPGGHYIQHQQAQQMTPQSLMAAR-----SSMLYTQQPFSTLQ--QQA 164
            AQ ++  SG +QP  +++QH QA   +P  + A R      S L  Q P    Q  QQA
Sbjct: 123 AAQMATPHSG-MQPPSYFMQHPQA---SPAGIFAPRGPLQFGSPLQFQDPQQQQQIHQQA 182

The following BLAST results are available for this feature:

BLAST of Tan0006780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8A5	2.6e-62	65.00	GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1	[more]
Q6AVI1	2.2e-40	52.54	GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 S...	[more]
A5HEH4	1.5e-36	52.16	GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1	[more]
Q9MAL9	6.1e-19	43.72	GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1	[more]
Q93VH6	4.0e-18	36.55	GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1	[more]

BLAST of Tan0006780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022965913.1	5.6e-110	96.86	GRF1-interacting factor 1-like [Cucurbita maxima]	[more]
XP_022937932.1	1.4e-108	96.43	GRF1-interacting factor 1-like [Cucurbita moschata]	[more]
XP_023538061.1	4.0e-108	95.98	GRF1-interacting factor 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_004139249.1	2.0e-107	95.54	GRF1-interacting factor 1 isoform X2 [Cucumis sativus]	[more]
KAG6586325.1	3.4e-107	93.86	GRF1-interacting factor 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Tan0006780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQC1	2.7e-110	96.86	GRF1-interacting factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111465656 PE=3 ...	[more]
A0A6J1FCK8	6.6e-109	96.43	GRF1-interacting factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444175 PE=...	[more]
A0A0A0LL92	9.6e-108	95.54	SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010170 PE=3 S...	[more]
A0A1S3C305	2.8e-107	95.09	GRF1-interacting factor 1 OS=Cucumis melo OX=3656 GN=LOC103496282 PE=3 SV=1	[more]
A0A6J1CPL3	2.4e-103	92.00	GRF1-interacting factor 1 OS=Momordica charantia OX=3673 GN=LOC111013134 PE=3 SV...	[more]

BLAST of Tan0006780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G28640.1	1.9e-63	65.00	SSXT family protein	[more]
AT1G01160.1	4.4e-20	43.72	GRF1-interacting factor 2	[more]
AT4G00850.1	2.8e-19	36.55	GRF1-interacting factor 3	[more]
AT1G01160.2	7.2e-15	36.87	GRF1-interacting factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007726	SS18, N-terminal	PFAM	PF05030	SSXT	coord: 19..76 e-value: 1.1E-21 score: 76.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..223
None	No IPR available	PANTHER	PTHR23107:SF18	GRF1-INTERACTING FACTOR 1	coord: 1..223
IPR044779	SS18 family	PANTHER	PTHR23107	SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN	coord: 1..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0006780.1	Tan0006780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008283	cell population proliferation
biological_process	GO:0048366	leaf development
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0048316	seed development
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003713	transcription coactivator activity