Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptide exon CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAGGCAATACCATTACTATTTCGATTTCCAAGGGATGATTACTTATGACTCTTTGATTGAAGCAGCCACTCGTATTGAAGATGCTATCTACAATGGGACTCATGGATCACAGGTCAAAGAGGCAGATCCAAAAGGAAAGAAGATAGCCCTGGGGGGAACAAGCAAGAACA GTGAAGTCAATGTCTTGTCTGACGTAAAGCCAAAGACACCCAGGACTTTCACTCCGTTAGGCATAACTCTCGCCGCGCCTTGGAAAAGCTTCAAAAGCATGGTGTACTCACGCCTCTTCCCCCATCTCCGCCACCAGATCCTCTTCCTCCTAGGTACAAAGCCAATGCCTACTGCAACATCAGACAAATGGCCAAAATACTGACCGGTGTTTAA mRNA sequence
ATGAGTAGGCAATACCATTACTATTTCGATTTCCAAGGGATGATTACTTATGACTCTTTGATTGAAGCAGCCACTCGTATTGAAGATGCTATCTACAATGGGACTCATGGATCACAGGTCAAAGAGGCAGATCCAAAAGGAAAGAAGATAGCCCTGGGGGGAACAAGCAAGAACACCAAAGACACCCAGGACTTTCACTCCGTTAGGCATAACTCTCGCCGCGCCTTGGAAAAGCTTCAAAAGCATGGTGTACTCACGCCTCTTCCCCCATCTCCGCCACCAGATCCTCTTCCTCCTAGGTACAAAGCCAATGCCTACTGCAACATCAGACAAATGGCCAAAATACTGACCGGTGTTTAA Coding sequence (CDS)
ATGAGTAGGCAATACCATTACTATTTCGATTTCCAAGGGATGATTACTTATGACTCTTTGATTGAAGCAGCCACTCGTATTGAAGATGCTATCTACAATGGGACTCATGGATCACAGGTCAAAGAGGCAGATCCAAAAGGAAAGAAGATAGCCCTGGGGGGAACAAGCAAGAACACCAAAGACACCCAGGACTTTCACTCCGTTAGGCATAACTCTCGCCGCGCCTTGGAAAAGCTTCAAAAGCATGGTGTACTCACGCCTCTTCCCCCATCTCCGCCACCAGATCCTCTTCCTCCTAGGTACAAAGCCAATGCCTACTGCAACATCAGACAAATGGCCAAAATACTGACCGGTGTTTAA Protein sequence
MSRQYHYYFDFQGMITYDSLIEAATRIEDAIYNGTHGSQVKEADPKGKKIALGGTSKNTKDTQDFHSVRHNSRRALEKLQKHGVLTPLPPSPPPDPLPPRYKANAYCNIRQMAKILTGV
Homology
BLAST of Tan0006594 vs. NCBI nr
Match:
XP_021665686.1 (uncharacterized protein LOC110654108 [Hevea brasiliensis])
HSP 1 Score: 55.8 bits (133), Expect = 2.9e-04
Identity = 34/117 (29.06%), Postives = 50/117 (42.74%), Query Frame = 0
Query: 5 YHYYFDFQGMITYDSLIEAATRIEDAIYNGTHGSQVKEADPKGKKIALGGTSKNTKDTQD 64 Y+ + + T++ L +A +ED + N + K PK G + Sbjct: 258 YYEKLCYYPLATFEQLYDAGVLVEDVLNN-----EKKSYQPKRGGYQSAGNITAENKVIE 317 Query: 65 FHSVRHNSR----------RALEKLQKHGVLTPLPPSPPPDPLPPRYKANAYCNIRQ 112 +V H R + E+L+ G+L PL P PPP+PLPP Y AN YC Q Sbjct: 318 VQTVSHTPRKFSQFNQPLSKVFERLKARGLLEPLAPRPPPNPLPPNYNANLYCQFHQ 369
BLAST of Tan0006594 vs. NCBI nr
Match:
XP_021665216.1 (uncharacterized protein LOC110653750 [Hevea brasiliensis])
HSP 1 Score: 55.5 bits (132), Expect = 3.7e-04
Identity = 34/115 (29.57%), Postives = 52/115 (45.22%), Query Frame = 0
Query: 5 YHYYFDFQGMITYDSLIEAATRIEDAIYNGTHGSQVKEADPKGKKIALGGTSKN------ 64 Y+ + + T++ L +A +ED + N Q K G + A T +N Sbjct: 258 YYEKLCYYPLATFEQLYDAGVLVEDVLNNEKKSYQPKRG---GYQSAGNITGENKVIEVQ 317 Query: 65 --TKDTQDFHSVRHNSRRALEKLQKHGVLTPLPPSPPPDPLPPRYKANAYCNIRQ 112 ++ + F + E+L+ G+L PL P PPP+PLPP Y AN YC Q Sbjct: 318 TVSRTPRKFSQFNQPLSKVFERLKARGLLQPLAPRPPPNPLPPNYNANLYCQFHQ 369
BLAST of Tan0006594 vs. ExPASy TrEMBL
Match:
A0A0A0LYJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G538150 PE=4 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 3.8e-10
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 0
Query: 54 GTSKNTKDTQDFHSVRHNSRRALEKLQKHGVLTPLPPSPPPDPLP 99 G +N+KDTQDFHS+ NSRRALEKL+KHGVLTPL PSPPPDP+P Sbjct: 11 GLYENSKDTQDFHSLFQNSRRALEKLKKHGVLTPLRPSPPPDPIP 55
BLAST of Tan0006594 vs. ExPASy TrEMBL
Match:
A0A438GLY1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_059169 PE=4 SV=1)
HSP 1 Score: 53.9 bits (128), Expect = 5.3e-04
Identity = 37/108 (34.26%), Postives = 57/108 (52.78%), Query Frame = 0
Query: 10 DFQGMI--TYDSLIEAATRIEDAIYNGTHGSQVKEADPKGKKIALGGTSKN----TKDTQ 69 DF G++ + SL++A IE+ I G S+ +D GKK LGG S+ + + Sbjct: 79 DFDGLLVANFGSLVQALYDIEEGIARGL-WSESSPSDSNGKK-PLGGQSREMSVLSVRQR 138 Query: 70 DFHSVRHNSRRALEKLQKHGVLTPLPPSPPPDPLPPRYKANAYCNIRQ 112 F + +AL KL + G+LT L P PPP P+PP++ + +C Q Sbjct: 139 QFSQLGMPLSQALRKLTEAGLLTTLTPRPPPQPVPPQFMMDLHCAYHQ 184
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
XP_021665686.1 2.9e-04 29.06 uncharacterized protein LOC110654108 [Hevea brasiliensis] [more]
XP_021665216.1 3.7e-04 29.57 uncharacterized protein LOC110653750 [Hevea brasiliensis] [more]
Match Name E-value Identity Description
A0A0A0LYJ1 3.8e-10 77.78 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G538150 PE=4 SV=1 [more]
A0A438GLY1 5.3e-04 34.26 Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_059169 PE=4 SV=1 [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
A T G A G T A G G C A A T A C C A T T A C T A T T T C G A T T T C C A A G G G A T G A T T A C T T A T G A C T C T T T G A T T G A A G C A G C C A C T C G T A T T G A A G A T G C T A T C T A C A A T G G G A C T C A T G G A T C A C A G G T C A A A G A G G C A G A T C C A A A A G G A A A G A A G A T A G C C C T G G G G G G A A C A A G C A A G A A C A C C A A A G A C A C C C A G G A C T T T C A C T C C G T T A G G C A T A A C T C T C G C C G C G C C T T G G A A A A G C T T C A A A A G C A T G G T G T A C T C A C G C C T C T T C C C C C A T C T C C G C C A C C A G A T C C T C T T C C T C C T A G G T A C A A A G C C A A T G C C T A C T G C A A C A T C A G A C A A A T G G C C A A A A T A C T G A C C G G T G T T T A A 50 100 150 200 250 300 350 Score = Score = Score = Sequence mobidb-lite mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 82..102
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 86..100
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 37..70
Relationships
The following mRNA feature(s) are a part of this gene: