Tan0006325 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAAATCTTGAAGAGAAAGATTTTGGGTGATTAAGAAGTGTAAAAGGAGGAGATGGCAGCTTCTTCAAAGGGTTTAAGAATTGCATCACTTATATTGAGAATTCTAACCTTCATTTTCATCTTTATTTCTCTTCTAATCAATGCCACCAATTCTAAGACTGTGCTCAAGGGGACTGAGTTTGAAACAAAATTTGAGTTTAAAGATTTTTATTCCTATCGGTGAGTGTCTTTGTGTATCTTTTCTTTCAATTCTAAACTAACTTTTGATTTAAATCTTTTTTTATTGTTAATGTAACCATTCTATTTATGTTATTTAAACGTACAGTTATTTGATATCAGCGGCTGTTATAGGAGCTGTTTTGAGTCTGATTCAAATTGTTCTCACCATTTATCATGTCGTTACTAAAAGCGATGGAGCTCCCCTATTCGATTTGTTCAGCGATAAGGTGACACATGCAAGAATGTATTAGCTTTTAATTTATCTATTTAAACTACGATATTTTTTTTGGTTTCTCAAGTTTCGTTCATAACCATTTTGTTTTTTAAAGTTAAACTTATTTTTCACCTAATTTCTCTACAATAGAGATTATCTTCTTAAATAAGCATTTGAACTCTTAGCCAAATTCTAAAAAAAAAAGTCAAAGTTTTTTAAAATTATTTTTTTTATTTTCAAAAGTTAGCTTGGTTTTTTAAAACATAGATACAAAATAAATAAAAAAAAACATATAAACTCATTGGTAGAAGTAGTATTTTTAAGTTTAAATTTCAAAAACAAAAATCAAAAAACAAAATAGTTACCAAACGGGGCCTTAATGTTTGTTTTAACATAAATATAATAGGAACAAAATGATGATTCAGAAAGAATTTTAGGTAAAATTTAAAGTGACCAATAGTATATATGGTCAAATGCCCGATTATATCCTAACGTTTTAGCTTATCTTTATATATTTTTTCCCTTCAAATATATGATTGAATGATATACAGGAGTTGAACTTTTTATAAGTTGATTTTGTTTTGGTTACCTTTATCGCTTATCTTTTTAATTCTTGATTAATCAAAGTTAATTATGTTTTATTCACCAAGAAAATAACATAAAAGACATAAAAAAGGAGAGCAAGAAATTGATGAAAAGGAAAGCAACCAAGGTGTCGTGAGGAGAAAGGCTTGGTACAGTTGACTTTATTATCAATTTGTTGGAAACATTCTTTTAACATAAATTGATTTGGAAATTTTCAATATAATAAAGAATCGCAATAGGAATTTTATTTTGAGAAAACTTACCGTGAAAGGAAAAAAAAAAACATTTGATGTGGAGATTGCAAAGTTGTTAAATTAGGGAAATTAAGGCTCCTTTCATAACCATTTAGCTTTTAGTTTTTTGTTATTAAAAATTAAACCTATAAATAATATTTCCACCCACTCATGATTTTCCTTGTTTTTTTATAACCAAATAAAGTTTTGAAAACTAAAAAAAAAAATAGTTTAAAAAAATTTGTTTTTATTTTTTGAATAATTTAGTTAAGAATTCAAGTGTTTTCTTAAGAAAAATGAGAAACATGGTAGGAAAGATAAATACCATTAGAGAGAAATAGTGAGAAAACAACAAATGATTATCAAACAAGACTTAAATAAACAAAACCCAATTAGATAACCTTTTATTTTTACACTTTTATGCTTAGAAATTGAGTAAAGCTAAATATACCTAATATTCTCGATTTTTTTTTTATTTGCTTCTTAATTTTTTGAACTTTTCAATTTTATGTGTAATGTATTAAAAAATTTCAATTGAGATCCATTGCATAAAGAATATGTTAAAATTGACAACAACAATATGTTGTGTCATTAAATTATTTTCTAATGACATTACTTAAGAGTAACTAAAATTAGGTACAAGATTAGGAACAATTTTTTTATGCATTGGTAAAGTATGAAAAAACTTAGAAAGGAGAATGAATGTTTTATGTTATTCTATGTGTAGTTACTGTCATACCTTTTATTGTCGGGCGCCTCGGCAGGATTAGGCGCTGGAATGGATTTAAAAGTGAAGTCTAAACCGGATTATGACAATCTTTTATACCCATTTTTCGACAAGGGTAATGCTGCAGCTGCTATTCTTCTCCTTGCATTTTTTTGGGCTGCCATTGTCTCAATTCTCTCTTCATTAGCTCTCATCAGAAAGCCTTAATCAATATTCATTTCTTCCTTCTCAAAATTACCACTTCTTTCCATTGACTTCTGTTTGGTTTGTGTGTAAATATTTTTGTTGTTGAACTGTGTGTCTTCATTACCCTTTTTCTTCTTCGTTTTCTCTAATACAACGAATAAAGAAGCGTTGATGTGAACTTCCGACCTTTAAGGGCACAGTAGATGTCTTGCCCATTAAATTATGTTTATATTTGTATCTTTATTGACTTTTGTATTTATGTACCCTCTTCCATATTTGATTTTGTATTCTACGTTTTAATTTTTATTTGTGGTATGTGATTTAGCTTAATGGATATATGATTAATTTGATCGAA CTAAATCTTGAAGAGAAAGATTTTGGGTGATTAAGAAGTGTAAAAGGAGGAGATGGCAGCTTCTTCAAAGGGTTTAAGAATTGCATCACTTATATTGAGAATTCTAACCTTCATTTTCATCTTTATTTCTCTTCTAATCAATGCCACCAATTCTAAGACTGTGCTCAAGGGGACTGAGTTTGAAACAAAATTTGAGTTTAAAGATTTTTATTCCTATCGTTATTTGATATCAGCGGCTGTTATAGGAGCTGTTTTGAGTCTGATTCAAATTGTTCTCACCATTTATCATGTCGTTACTAAAAGCGATGGAGCTCCCCTATTCGATTTGTTCAGCGATAAGTTACTGTCATACCTTTTATTGTCGGGCGCCTCGGCAGGATTAGGCGCTGGAATGGATTTAAAAGTGAAGTCTAAACCGGATTATGACAATCTTTTATACCCATTTTTCGACAAGGGTAATGCTGCAGCTGCTATTCTTCTCCTTGCATTTTTTTGGGCTGCCATTGTCTCAATTCTCTCTTCATTAGCTCTCATCAGAAAGCCTTAATCAATATTCATTTCTTCCTTCTCAAAATTACCACTTCTTTCCATTGACTTCTGTTTGGTTTGTGTGTAAATATTTTTGTTGTTGAACTGTGTGTCTTCATTACCCTTTTTCTTCTTCGTTTTCTCTAATACAACGAATAAAGAAGCGTTGATGTGAACTTCCGACCTTTAAGGGCACAGTAGATGTCTTGCCCATTAAATTATGTTTATATTTGTATCTTTATTGACTTTTGTATTTATGTACCCTCTTCCATATTTGATTTTGTATTCTACGTTTTAATTTTTATTTGTGGTATGTGATTTAGCTTAATGGATATATGATTAATTTGATCGAA ATGGCAGCTTCTTCAAAGGGTTTAAGAATTGCATCACTTATATTGAGAATTCTAACCTTCATTTTCATCTTTATTTCTCTTCTAATCAATGCCACCAATTCTAAGACTGTGCTCAAGGGGACTGAGTTTGAAACAAAATTTGAGTTTAAAGATTTTTATTCCTATCGTTATTTGATATCAGCGGCTGTTATAGGAGCTGTTTTGAGTCTGATTCAAATTGTTCTCACCATTTATCATGTCGTTACTAAAAGCGATGGAGCTCCCCTATTCGATTTGTTCAGCGATAAGTTACTGTCATACCTTTTATTGTCGGGCGCCTCGGCAGGATTAGGCGCTGGAATGGATTTAAAAGTGAAGTCTAAACCGGATTATGACAATCTTTTATACCCATTTTTCGACAAGGGTAATGCTGCAGCTGCTATTCTTCTCCTTGCATTTTTTTGGGCTGCCATTGTCTCAATTCTCTCTTCATTAGCTCTCATCAGAAAGCCTTAA MAASSKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAAVIGAVLSLIQIVLTIYHVVTKSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLKVKSKPDYDNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRKP Homology
BLAST of Tan0006325 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.8e-23 Identity = 69/159 (43.40%), Postives = 101/159 (63.52%), Query Frame = 0
BLAST of Tan0006325 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 5.2e-23 Identity = 69/168 (41.07%), Postives = 107/168 (63.69%), Query Frame = 0
BLAST of Tan0006325 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2) HSP 1 Score: 109.0 bits (271), Expect = 5.2e-23 Identity = 69/167 (41.32%), Postives = 103/167 (61.68%), Query Frame = 0
BLAST of Tan0006325 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.8e-21 Identity = 70/170 (41.18%), Postives = 105/170 (61.76%), Query Frame = 0
BLAST of Tan0006325 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 4.8e-21 Identity = 66/162 (40.74%), Postives = 101/162 (62.35%), Query Frame = 0
BLAST of Tan0006325 vs. NCBI nr
Match: XP_022134193.1 (CASP-like protein 4D1 [Momordica charantia]) HSP 1 Score: 223.0 bits (567), Expect = 1.9e-54 Identity = 123/162 (75.93%), Postives = 138/162 (85.19%), Query Frame = 0
BLAST of Tan0006325 vs. NCBI nr
Match: XP_038877614.1 (CASP-like protein 4D1 [Benincasa hispida]) HSP 1 Score: 216.9 bits (551), Expect = 1.3e-52 Identity = 122/161 (75.78%), Postives = 134/161 (83.23%), Query Frame = 0
BLAST of Tan0006325 vs. NCBI nr
Match: XP_022990642.1 (CASP-like protein 4D1 [Cucurbita maxima]) HSP 1 Score: 216.5 bits (550), Expect = 1.8e-52 Identity = 124/160 (77.50%), Postives = 135/160 (84.38%), Query Frame = 0
BLAST of Tan0006325 vs. NCBI nr
Match: XP_023525049.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 215.7 bits (548), Expect = 3.0e-52 Identity = 123/160 (76.88%), Postives = 135/160 (84.38%), Query Frame = 0
BLAST of Tan0006325 vs. NCBI nr
Match: XP_022954145.1 (CASP-like protein 4D1 [Cucurbita moschata]) HSP 1 Score: 215.3 bits (547), Expect = 3.9e-52 Identity = 124/160 (77.50%), Postives = 134/160 (83.75%), Query Frame = 0
BLAST of Tan0006325 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 9.1e-55 Identity = 123/162 (75.93%), Postives = 138/162 (85.19%), Query Frame = 0
BLAST of Tan0006325 vs. ExPASy TrEMBL
Match: A0A6J1JJD2 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 8.5e-53 Identity = 124/160 (77.50%), Postives = 135/160 (84.38%), Query Frame = 0
BLAST of Tan0006325 vs. ExPASy TrEMBL
Match: A0A6J1GRM4 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.9e-52 Identity = 124/160 (77.50%), Postives = 134/160 (83.75%), Query Frame = 0
BLAST of Tan0006325 vs. ExPASy TrEMBL
Match: A0A6J1HET3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 5.1e-50 Identity = 115/162 (70.99%), Postives = 135/162 (83.33%), Query Frame = 0
BLAST of Tan0006325 vs. ExPASy TrEMBL
Match: A0A6J1JSF8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 9.7e-49 Identity = 113/162 (69.75%), Postives = 134/162 (82.72%), Query Frame = 0
BLAST of Tan0006325 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 103.2 bits (256), Expect = 2.0e-22 Identity = 70/170 (41.18%), Postives = 105/170 (61.76%), Query Frame = 0
BLAST of Tan0006325 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 102.4 bits (254), Expect = 3.4e-22 Identity = 66/162 (40.74%), Postives = 101/162 (62.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|