Tan0006325 (gene) Snake gourd v1

Overview


Name	Tan0006325
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	CASP-like protein
Location	LG11: 6229274 .. 6231792 (-)
RNA-Seq Expression	Tan0006325
Synteny	Tan0006325

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAATCTTGAAGAGAAAGATTTTGGGTGATTAAGAAGTGTAAAAGGAGGAGATGGCAGCTTCTTCAAAGGGTTTAAGAATTGCATCACTTATATTGAGAATTCTAACCTTCATTTTCATCTTTATTTCTCTTCTAATCAATGCCACCAATTCTAAGACTGTGCTCAAGGGGACTGAGTTTGAAACAAAATTTGAGTTTAAAGATTTTTATTCCTATCGGTGAGTGTCTTTGTGTATCTTTTCTTTCAATTCTAAACTAACTTTTGATTTAAATCTTTTTTTATTGTTAATGTAACCATTCTATTTATGTTATTTAAACGTACAGTTATTTGATATCAGCGGCTGTTATAGGAGCTGTTTTGAGTCTGATTCAAATTGTTCTCACCATTTATCATGTCGTTACTAAAAGCGATGGAGCTCCCCTATTCGATTTGTTCAGCGATAAGGTGACACATGCAAGAATGTATTAGCTTTTAATTTATCTATTTAAACTACGATATTTTTTTTGGTTTCTCAAGTTTCGTTCATAACCATTTTGTTTTTTAAAGTTAAACTTATTTTTCACCTAATTTCTCTACAATAGAGATTATCTTCTTAAATAAGCATTTGAACTCTTAGCCAAATTCTAAAAAAAAAAGTCAAAGTTTTTTAAAATTATTTTTTTTATTTTCAAAAGTTAGCTTGGTTTTTTAAAACATAGATACAAAATAAATAAAAAAAAACATATAAACTCATTGGTAGAAGTAGTATTTTTAAGTTTAAATTTCAAAAACAAAAATCAAAAAACAAAATAGTTACCAAACGGGGCCTTAATGTTTGTTTTAACATAAATATAATAGGAACAAAATGATGATTCAGAAAGAATTTTAGGTAAAATTTAAAGTGACCAATAGTATATATGGTCAAATGCCCGATTATATCCTAACGTTTTAGCTTATCTTTATATATTTTTTCCCTTCAAATATATGATTGAATGATATACAGGAGTTGAACTTTTTATAAGTTGATTTTGTTTTGGTTACCTTTATCGCTTATCTTTTTAATTCTTGATTAATCAAAGTTAATTATGTTTTATTCACCAAGAAAATAACATAAAAGACATAAAAAAGGAGAGCAAGAAATTGATGAAAAGGAAAGCAACCAAGGTGTCGTGAGGAGAAAGGCTTGGTACAGTTGACTTTATTATCAATTTGTTGGAAACATTCTTTTAACATAAATTGATTTGGAAATTTTCAATATAATAAAGAATCGCAATAGGAATTTTATTTTGAGAAAACTTACCGTGAAAGGAAAAAAAAAAACATTTGATGTGGAGATTGCAAAGTTGTTAAATTAGGGAAATTAAGGCTCCTTTCATAACCATTTAGCTTTTAGTTTTTTGTTATTAAAAATTAAACCTATAAATAATATTTCCACCCACTCATGATTTTCCTTGTTTTTTTATAACCAAATAAAGTTTTGAAAACTAAAAAAAAAAATAGTTTAAAAAAATTTGTTTTTATTTTTTGAATAATTTAGTTAAGAATTCAAGTGTTTTCTTAAGAAAAATGAGAAACATGGTAGGAAAGATAAATACCATTAGAGAGAAATAGTGAGAAAACAACAAATGATTATCAAACAAGACTTAAATAAACAAAACCCAATTAGATAACCTTTTATTTTTACACTTTTATGCTTAGAAATTGAGTAAAGCTAAATATACCTAATATTCTCGATTTTTTTTTTATTTGCTTCTTAATTTTTTGAACTTTTCAATTTTATGTGTAATGTATTAAAAAATTTCAATTGAGATCCATTGCATAAAGAATATGTTAAAATTGACAACAACAATATGTTGTGTCATTAAATTATTTTCTAATGACATTACTTAAGAGTAACTAAAATTAGGTACAAGATTAGGAACAATTTTTTTATGCATTGGTAAAGTATGAAAAAACTTAGAAAGGAGAATGAATGTTTTATGTTATTCTATGTGTAGTTACTGTCATACCTTTTATTGTCGGGCGCCTCGGCAGGATTAGGCGCTGGAATGGATTTAAAAGTGAAGTCTAAACCGGATTATGACAATCTTTTATACCCATTTTTCGACAAGGGTAATGCTGCAGCTGCTATTCTTCTCCTTGCATTTTTTTGGGCTGCCATTGTCTCAATTCTCTCTTCATTAGCTCTCATCAGAAAGCCTTAATCAATATTCATTTCTTCCTTCTCAAAATTACCACTTCTTTCCATTGACTTCTGTTTGGTTTGTGTGTAAATATTTTTGTTGTTGAACTGTGTGTCTTCATTACCCTTTTTCTTCTTCGTTTTCTCTAATACAACGAATAAAGAAGCGTTGATGTGAACTTCCGACCTTTAAGGGCACAGTAGATGTCTTGCCCATTAAATTATGTTTATATTTGTATCTTTATTGACTTTTGTATTTATGTACCCTCTTCCATATTTGATTTTGTATTCTACGTTTTAATTTTTATTTGTGGTATGTGATTTAGCTTAATGGATATATGATTAATTTGATCGAA

mRNA sequence

CTAAATCTTGAAGAGAAAGATTTTGGGTGATTAAGAAGTGTAAAAGGAGGAGATGGCAGCTTCTTCAAAGGGTTTAAGAATTGCATCACTTATATTGAGAATTCTAACCTTCATTTTCATCTTTATTTCTCTTCTAATCAATGCCACCAATTCTAAGACTGTGCTCAAGGGGACTGAGTTTGAAACAAAATTTGAGTTTAAAGATTTTTATTCCTATCGTTATTTGATATCAGCGGCTGTTATAGGAGCTGTTTTGAGTCTGATTCAAATTGTTCTCACCATTTATCATGTCGTTACTAAAAGCGATGGAGCTCCCCTATTCGATTTGTTCAGCGATAAGTTACTGTCATACCTTTTATTGTCGGGCGCCTCGGCAGGATTAGGCGCTGGAATGGATTTAAAAGTGAAGTCTAAACCGGATTATGACAATCTTTTATACCCATTTTTCGACAAGGGTAATGCTGCAGCTGCTATTCTTCTCCTTGCATTTTTTTGGGCTGCCATTGTCTCAATTCTCTCTTCATTAGCTCTCATCAGAAAGCCTTAATCAATATTCATTTCTTCCTTCTCAAAATTACCACTTCTTTCCATTGACTTCTGTTTGGTTTGTGTGTAAATATTTTTGTTGTTGAACTGTGTGTCTTCATTACCCTTTTTCTTCTTCGTTTTCTCTAATACAACGAATAAAGAAGCGTTGATGTGAACTTCCGACCTTTAAGGGCACAGTAGATGTCTTGCCCATTAAATTATGTTTATATTTGTATCTTTATTGACTTTTGTATTTATGTACCCTCTTCCATATTTGATTTTGTATTCTACGTTTTAATTTTTATTTGTGGTATGTGATTTAGCTTAATGGATATATGATTAATTTGATCGAA

Coding sequence (CDS)

ATGGCAGCTTCTTCAAAGGGTTTAAGAATTGCATCACTTATATTGAGAATTCTAACCTTCATTTTCATCTTTATTTCTCTTCTAATCAATGCCACCAATTCTAAGACTGTGCTCAAGGGGACTGAGTTTGAAACAAAATTTGAGTTTAAAGATTTTTATTCCTATCGTTATTTGATATCAGCGGCTGTTATAGGAGCTGTTTTGAGTCTGATTCAAATTGTTCTCACCATTTATCATGTCGTTACTAAAAGCGATGGAGCTCCCCTATTCGATTTGTTCAGCGATAAGTTACTGTCATACCTTTTATTGTCGGGCGCCTCGGCAGGATTAGGCGCTGGAATGGATTTAAAAGTGAAGTCTAAACCGGATTATGACAATCTTTTATACCCATTTTTCGACAAGGGTAATGCTGCAGCTGCTATTCTTCTCCTTGCATTTTTTTGGGCTGCCATTGTCTCAATTCTCTCTTCATTAGCTCTCATCAGAAAGCCTTAA

Protein sequence

MAASSKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAAVIGAVLSLIQIVLTIYHVVTKSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLKVKSKPDYDNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRKP

Homology

[Close]

BLAST of Tan0006325 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.8e-23
Identity = 69/159 (43.40%), Postives = 101/159 (63.52%), Query Frame = 0


Query: 9   RIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAAVIGAVL 68
           R+A+LILRILTFIF+  SL+I  TN+ T L+    E K  FKD Y+YRY+++  VIG   
Sbjct: 11  RMAALILRILTFIFLIASLVILTTNTAT-LELDLVEVKVHFKDVYAYRYMLATIVIGLAY 70

Query: 69  SLIQIVLTIYHVVT-----KSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLK--VKSK 128
           +++QI  T+Y+V T       DG   FD F DK++SY+L++GA+AG  +  D+K      
Sbjct: 71  TVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPVFSGS 130

Query: 129 PDYDNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLAL 161
            D+D     F +KG A+A++LL+ F   A++S+ SS AL
Sbjct: 131 GDFD----AFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of Tan0006325 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.2e-23
Identity = 69/168 (41.07%), Postives = 107/168 (63.69%), Query Frame = 0


Query: 3   ASSKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFET--KFEFKDFYSYRYLIS 62
           +SS G R   L+LR+LTF+F+ I+L++ A     ++K T+ ET  + +F D Y+YRY+IS
Sbjct: 12  SSSTGSRTVLLLLRVLTFVFLLIALILIA-----IVKQTDDETGVEIKFNDIYAYRYMIS 71

Query: 63  AAVIGAVLSLIQIVLTIYHVVT-----KSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMD 122
             +IG   +L+Q+ L+I+ VV+       DG  LFD F DK++SYLL+SG++AG G  ++
Sbjct: 72  TIIIGFAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVE 131

Query: 123 LKVKSKPDYDNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRK 164
           L  +  P        F DK NA+A++LL+AF + A+ S  +S AL +K
Sbjct: 132 LG-RGVPSNS-----FMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of Tan0006325 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 5.2e-23
Identity = 69/167 (41.32%), Postives = 103/167 (61.68%), Query Frame = 0


Query: 3   ASSKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAA 62
           A S   R+ +L LR+LTF F+ +SL+I  TN+ T+  G + E K   KDFYSYRY+++A 
Sbjct: 14  APSMVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGID-EFKVRSKDFYSYRYMLAAI 73

Query: 63  VIGAVLSLIQIVLTIYHV------VTKSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDL 122
             G   +++QI LT+ H+       T  DG  +FD + DK++SY+L +GA+A  GA  +L
Sbjct: 74  AFGLTYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKEL 133

Query: 123 KVKSKPDYDNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRK 164
           K +      +    FF+KG A+A++LLL F   AI+S+ SS AL +K
Sbjct: 134 KTQLAGLGGD---KFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of Tan0006325 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-21
Identity = 70/170 (41.18%), Postives = 105/170 (61.76%), Query Frame = 0


Query: 2   AASSKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISA 61
           A  S  LR   L+LR+LT  F+ I++++ +TN+ T L+ +    K  F D Y+YRY++SA
Sbjct: 7   APPSVTLRTVLLLLRVLTAAFLLITVVLISTNTVT-LEISSTSIKLPFNDVYAYRYMLSA 66

Query: 62  AVIGAVLSLIQIVLTIYHVVTKSDGAPL---FDLFSDKLLSYLLLSGASAGLGAGMDLK- 121
           AVIG V +++Q+ LTI    T     PL   FD + DK++SYLL +G++AG G   DLK 
Sbjct: 67  AVIGLVYAVVQLFLTISQFAT-GKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKD 126

Query: 122 ---VKSKPDYDNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRKP 165
                 + D  + +  FF KG A+A++LL AF   A++S+ SSLAL ++P
Sbjct: 127 TYIALIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of Tan0006325 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.8e-21
Identity = 66/162 (40.74%), Postives = 101/162 (62.35%), Query Frame = 0


Query: 8   LRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAAVIGAV 67
           L++  L+LR+LT +F+ I+L+I +TNS T++       KF FKD Y+YRY++SAAVIG V
Sbjct: 13  LKVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGS-ALKFHFKDVYAYRYMLSAAVIGLV 72

Query: 68  LSLIQIVLTIYHVVT--KSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLK----VKSK 127
            ++IQ+  TI    T  K+      D + DKL+SYL+ +G++AG G   DLK        
Sbjct: 73  YAVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVA 132

Query: 128 PDYDNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRK 164
            D  + +  FF KG A+A++LL AF   A++S+ SS A+ ++
Sbjct: 133 LDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of Tan0006325 vs. NCBI nr
Match: XP_022134193.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 223.0 bits (567), Expect = 1.9e-54
Identity = 123/162 (75.93%), Postives = 138/162 (85.19%), Query Frame = 0


Query: 3   ASSKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAA 62
           A+SKG RIASLILRILTF+ IFISLLI ATNSKTVLKGTE E K EFKD YSYRYL +AA
Sbjct: 2   AASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAA 61

Query: 63  VIGAVLSLIQIVLTIYHVVTKSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLKVKSKP 122
           VIGA LSL+QI LT+YHVVTKSDG P FD+FSDKLL+YLLLSGASAGLGAG+DL+   K 
Sbjct: 62  VIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYKD 121

Query: 123 DYDNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRKP 165
              N+   FFDKG+A+AAILLLAF  +A+VSILSSLAL+RKP
Sbjct: 122 LVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of Tan0006325 vs. NCBI nr
Match: XP_038877614.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 216.9 bits (551), Expect = 1.3e-52
Identity = 122/161 (75.78%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 4   SSKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAAV 63
           +SKG RIASLILRILTFI IF++LLI ATNSKTVL+GT  ETK EFKD  SYRYL++ AV
Sbjct: 2   ASKGSRIASLILRILTFILIFVALLIIATNSKTVLEGTVNETKIEFKDVNSYRYLVAVAV 61

Query: 64  IGAVLSLIQIVLTIYHVVTKSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLKVKSKPD 123
           IG  LSL+QI  TIYH+VTK DG PLFDLFSDKLLSYLLLSGASAGLGAG+D++V  K  
Sbjct: 62  IGGALSLLQIAFTIYHLVTKGDGTPLFDLFSDKLLSYLLLSGASAGLGAGIDMRVNFKEL 121

Query: 124 YDNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRKP 165
             N    FFDKG+AAAAILLLAF  AAIVSILSSLALIRKP
Sbjct: 122 VGNFFNSFFDKGSAAAAILLLAFICAAIVSILSSLALIRKP 162

[Close]

BLAST of Tan0006325 vs. NCBI nr
Match: XP_022990642.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-52
Identity = 124/160 (77.50%), Postives = 135/160 (84.38%), Query Frame = 0


Query: 5   SKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAAVI 64
           SKG RIASLILRILTFI IFISLLINATNSKT+ KG E ETKF+FKD YSYRYLIS  +I
Sbjct: 4   SKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTII 63

Query: 65  GAVLSLIQIVLTIYHVVTKSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLKVKSKPDY 124
           GAVLSL+QI L IY+VVTKS    LFD+FSDKLLSYLLLSGASAGLGAG+DL+V  K   
Sbjct: 64  GAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELV 123

Query: 125 DNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRKP 165
            NLL  F DKGNA+AA+LLLAF  AA+VSILSSLALIRKP
Sbjct: 124 GNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of Tan0006325 vs. NCBI nr
Match: XP_023525049.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 215.7 bits (548), Expect = 3.0e-52
Identity = 123/160 (76.88%), Postives = 135/160 (84.38%), Query Frame = 0


Query: 5   SKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAAVI 64
           SKG RIASLILRILTFI IFISL+INATNSKT  KG + ETKF+FKD YSYRYLIS  +I
Sbjct: 4   SKGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLISTMII 63

Query: 65  GAVLSLIQIVLTIYHVVTKSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLKVKSKPDY 124
           GAVLSL+QI L IY+VVTKS    LFD+FSDKLLSYLLLSGASAGLGAG+DL+V  K   
Sbjct: 64  GAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELV 123

Query: 125 DNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRKP 165
            NLL  FFDKGNA+AA+LLLAF  AA+VSILSSLALIRKP
Sbjct: 124 GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of Tan0006325 vs. NCBI nr
Match: XP_022954145.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 215.3 bits (547), Expect = 3.9e-52
Identity = 124/160 (77.50%), Postives = 134/160 (83.75%), Query Frame = 0


Query: 5   SKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAAVI 64
           SKG RIASLILRILTFI IFISL+INATNSKT  KG E ET F+FKD YSYRYLIS  VI
Sbjct: 4   SKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVI 63

Query: 65  GAVLSLIQIVLTIYHVVTKSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLKVKSKPDY 124
           GAVLSL+QI L IY+VVTKS    LFD+FSDKLLSYLLLSGASAGLGAG+DL+V  K   
Sbjct: 64  GAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELV 123

Query: 125 DNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRKP 165
            NLL  FFDKGNA+AA+LLLAF  AA+VSILSSLALIRKP
Sbjct: 124 GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of Tan0006325 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 9.1e-55
Identity = 123/162 (75.93%), Postives = 138/162 (85.19%), Query Frame = 0


Query: 3   ASSKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAA 62
           A+SKG RIASLILRILTF+ IFISLLI ATNSKTVLKGTE E K EFKD YSYRYL +AA
Sbjct: 2   AASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAA 61

Query: 63  VIGAVLSLIQIVLTIYHVVTKSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLKVKSKP 122
           VIGA LSL+QI LT+YHVVTKSDG P FD+FSDKLL+YLLLSGASAGLGAG+DL+   K 
Sbjct: 62  VIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYKD 121

Query: 123 DYDNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRKP 165
              N+   FFDKG+A+AAILLLAF  +A+VSILSSLAL+RKP
Sbjct: 122 LVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of Tan0006325 vs. ExPASy TrEMBL
Match: A0A6J1JJD2 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 8.5e-53
Identity = 124/160 (77.50%), Postives = 135/160 (84.38%), Query Frame = 0


Query: 5   SKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAAVI 64
           SKG RIASLILRILTFI IFISLLINATNSKT+ KG E ETKF+FKD YSYRYLIS  +I
Sbjct: 4   SKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTII 63

Query: 65  GAVLSLIQIVLTIYHVVTKSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLKVKSKPDY 124
           GAVLSL+QI L IY+VVTKS    LFD+FSDKLLSYLLLSGASAGLGAG+DL+V  K   
Sbjct: 64  GAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELV 123

Query: 125 DNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRKP 165
            NLL  F DKGNA+AA+LLLAF  AA+VSILSSLALIRKP
Sbjct: 124 GNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of Tan0006325 vs. ExPASy TrEMBL
Match: A0A6J1GRM4 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.9e-52
Identity = 124/160 (77.50%), Postives = 134/160 (83.75%), Query Frame = 0


Query: 5   SKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAAVI 64
           SKG RIASLILRILTFI IFISL+INATNSKT  KG E ET F+FKD YSYRYLIS  VI
Sbjct: 4   SKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLISTTVI 63

Query: 65  GAVLSLIQIVLTIYHVVTKSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLKVKSKPDY 124
           GAVLSL+QI L IY+VVTKS    LFD+FSDKLLSYLLLSGASAGLGAG+DL+V  K   
Sbjct: 64  GAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELV 123

Query: 125 DNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRKP 165
            NLL  FFDKGNA+AA+LLLAF  AA+VSILSSLALIRKP
Sbjct: 124 GNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of Tan0006325 vs. ExPASy TrEMBL
Match: A0A6J1HET3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 5.1e-50
Identity = 115/162 (70.99%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 3   ASSKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAA 62
           A+SKG RIASLILRILTFI IFISL+INATNSKT+ KGTE E K EFK+ YSYRYLI+AA
Sbjct: 2   AASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAAA 61

Query: 63  VIGAVLSLIQIVLTIYHVVTKSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLKVKSKP 122
           VIG VLSLIQI+L+IYH+VTKS+G PLF LFSD LLSYLLLS +SA LGAG+D++   K 
Sbjct: 62  VIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLKE 121

Query: 123 DYDNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRKP 165
            +  L   FFD+G+ AAA+L +AF  AA+VSILS+LALIRKP
Sbjct: 122 LFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 163

[Close]

BLAST of Tan0006325 vs. ExPASy TrEMBL
Match: A0A6J1JSF8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 9.7e-49
Identity = 113/162 (69.75%), Postives = 134/162 (82.72%), Query Frame = 0


Query: 3   ASSKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAA 62
           A+SKG RIA+LILRILT I IFISL+INA+NSKT+ KGTE E K EFK+ YSYRYLI+AA
Sbjct: 2   AASKGSRIATLILRILTLILIFISLIINASNSKTLNKGTENEAKLEFKNVYSYRYLIAAA 61

Query: 63  VIGAVLSLIQIVLTIYHVVTKSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLKVKSKP 122
           VIG VLSLIQI+L+IYH+VTKS+G PLF LFSD LLSYLLLS +SA LGAG+D +   K 
Sbjct: 62  VIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDTRANLKE 121

Query: 123 DYDNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRKP 165
            +  L   FFD+G+ AAA+LL+AF  AA+VSILS+LALIRKP
Sbjct: 122 LFGTLFDSFFDQGSGAAAVLLIAFICAAVVSILSALALIRKP 163

[Close]

BLAST of Tan0006325 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-22
Identity = 70/170 (41.18%), Postives = 105/170 (61.76%), Query Frame = 0


Query: 2   AASSKGLRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISA 61
           A  S  LR   L+LR+LT  F+ I++++ +TN+ T L+ +    K  F D Y+YRY++SA
Sbjct: 7   APPSVTLRTVLLLLRVLTAAFLLITVVLISTNTVT-LEISSTSIKLPFNDVYAYRYMLSA 66

Query: 62  AVIGAVLSLIQIVLTIYHVVTKSDGAPL---FDLFSDKLLSYLLLSGASAGLGAGMDLK- 121
           AVIG V +++Q+ LTI    T     PL   FD + DK++SYLL +G++AG G   DLK 
Sbjct: 67  AVIGLVYAVVQLFLTISQFAT-GKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKD 126

Query: 122 ---VKSKPDYDNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRKP 165
                 + D  + +  FF KG A+A++LL AF   A++S+ SSLAL ++P
Sbjct: 127 TYIALIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of Tan0006325 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-22
Identity = 66/162 (40.74%), Postives = 101/162 (62.35%), Query Frame = 0


Query: 8   LRIASLILRILTFIFIFISLLINATNSKTVLKGTEFETKFEFKDFYSYRYLISAAVIGAV 67
           L++  L+LR+LT +F+ I+L+I +TNS T++       KF FKD Y+YRY++SAAVIG V
Sbjct: 13  LKVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGS-ALKFHFKDVYAYRYMLSAAVIGLV 72

Query: 68  LSLIQIVLTIYHVVT--KSDGAPLFDLFSDKLLSYLLLSGASAGLGAGMDLK----VKSK 127
            ++IQ+  TI    T  K+      D + DKL+SYL+ +G++AG G   DLK        
Sbjct: 73  YAVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVA 132

Query: 128 PDYDNLLYPFFDKGNAAAAILLLAFFWAAIVSILSSLALIRK 164
            D  + +  FF KG A+A++LL AF   A++S+ SS A+ ++
Sbjct: 133 LDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

The following BLAST results are available for this feature:

BLAST of Tan0006325 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SXY8	1.8e-23	43.40	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
C6T1Z6	5.2e-23	41.07	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9NBE5	5.2e-23	41.32	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
Q8GWD5	2.8e-21	41.18	CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1	[more]
Q56X75	4.8e-21	40.74	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]

BLAST of Tan0006325 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134193.1	1.9e-54	75.93	CASP-like protein 4D1 [Momordica charantia]	[more]
XP_038877614.1	1.3e-52	75.78	CASP-like protein 4D1 [Benincasa hispida]	[more]
XP_022990642.1	1.8e-52	77.50	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_023525049.1	3.0e-52	76.88	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]
XP_022954145.1	3.9e-52	77.50	CASP-like protein 4D1 [Cucurbita moschata]	[more]

BLAST of Tan0006325 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1A4	9.1e-55	75.93	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1	[more]
A0A6J1JJD2	8.5e-53	77.50	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1	[more]
A0A6J1GRM4	1.9e-52	77.50	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1	[more]
A0A6J1HET3	5.1e-50	70.99	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1	[more]
A0A6J1JSF8	9.7e-49	69.75	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1	[more]

BLAST of Tan0006325 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39530.1	2.0e-22	41.18	Uncharacterised protein family (UPF0497)	[more]
AT2G39518.1	3.4e-22	40.74	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..147 e-value: 4.6E-23 score: 81.7
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 5..163
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 5..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0006325.1	Tan0006325.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding