Tan0005813 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTCGGTATTTTACGTCTTGCCCTCAGTTCTTAGTTCCCTCGCAGTTCGCAGACTTGGCGTCGCCACTTCTTCCTCGTCGGAGCGCAGATCGTTGCCGCTTGCCGGAGCCAACCCTTGTTTGAGCCTTTGCAATTCACAATCTTTCCTTTCTGAGTTCAGTCCATCGCACGACCTTCAGAATCGGAGGTCAGTGATCTCGAATTTCGAGTCATTTTGGGACCTAAGTAATTCTTCTATGTTTTTCTTCAGTTTTTTTCGGGAATCTTTTTTATAGTAAAAAACAAGAGCGAACAAGACAGGAAATTTGGTTTGTGGTTATTTGTTCTCTCGCTCGCTTTAATTTCTTTCTCTCTATCAATCTGAGATGTGCGTTATGCTATTGGGTTTGCATTGCATGCATGTCTTGTTGTTAGACGAGAGGCGGCTTAACAACTTGGGGAGAGAAATAGAGCAACGAACCAATCCGAATGAATGGTTCGGTTTGATTCAGTTCTTTAGTGTTGAGTTGCGTGTTCTGTTTACTGTATTTCAAAAAATTATTTGAAATCTGGTCTGATTTGAAATCTTGGGGTATCCAAACAGAGGGTAAAAGGATTGTTTTGTAGAAGATTGAATTGAACCAAACCAAACTATGTCCACCTCTAATTGTTAGGGTTTTAGGAAGCGTAAATTTAAAGTTGGCATTCCATTTTCAGATGATTTATTTTTGTTGTTTTTGGATTGTATGTAGTCTCACTGTTTAGTCTTTGAATTCAAGCAGCATTGGTGCAGCCATGTTTCTGACACGAGTGTTTGGGAGAACATTTCTAGCTGCTGCTAGATCAGAAACTTCTTCTGTGACAGCTGCTGCTGCTTCTACAGCTAGGATGGGGTATAATCCGCTCGAGGAGTTTTTTGAGGCCGATAGAAGTCCAGACGATGACAAACCTGTTGTATATGGTATATTCTTACTTTTCCCTTGAGCTTTGGTCTTTGGTAGCTACCTATAAATTTGTAATTTGGTTCATTCATTTTGAAGAATTTGTCTCAAGATACTGTTGTTCGGGGATGCAAATTTATACCTGGGTGTCTGGTCTTTGAACTTGAATTCATGGAGGGTCCACTCTTTCATGGGAATGAATACAAATTGATTAGATGAGCCACTGCTCTAACAGAAAAGAGCCTCCTTGTCATGCATGTAGCCTGAATGCATTGTTGAGGTAACAAGACTAGAGGTGGTTACGGACTATGGAGGACTTGGTTAATTTCAAATAATTGGTTACTGGGGACTGGATTCTGCTTCATTTTTAAAACATCACAAATGTGATATAATTTTATATGACATAATAGGTGAAAATGAGTAATTACAAATAAATATGATAGACTAATTATGCCTTCAAAGTCTAACACTTTGGAGACACCAAAGTACTCCTCCAAGAAAATATATATTCAGTTTCATCATAGTTTCAATAGAATAGCTTCCTTCTTTGTTTTCTTTGAAAACATGGTTGTTTGGAAAATTACCTGATTGGTTGTGTAGTGAAAATAGGAGCAAGGACTTCAAATAGGTGTAGGCTTCCTTGATTATGTCTGATCTATCTGCGTAGCTTGAATACCTGTCGATGCTTTCTTATTGCTGAAACTGTGTTATGTGTGCCATGTGATCAGCCCTTGAAAATTTTATGTGCACTTTTGGAATTTTTTTTTTTTTAAAGTAAAGTGTTCTGTGTATGGTTGCACTTGTGATGCGAATTCTTGTTAATACTGTAGCATGGTGTCTATCTGTTTGGTTACTCTCTTCGAATAAATATGTGGTGCCGAAAAATGCTTGTTCTTTGTCAAGAGGCTATTTTATCTAAGGATTTTAGATGCATACTTTCCTCATGTCAATTTTCAGACTTGACTTTGTACAAAGTTGCTACATATATATAGGCCCTACTTCTGAGGAATAAAGACGTCTCTTAAAAGTTAAAACAACCAGAATCAAAGTATGTAATAGAAGATTTTATGAGATTTGGAATGTTCTCTCTCTTGGTGGTCACCTATTTTGGATATGAGTATCCTTAAAGTTGTCTGACTCTAATTCTATAGGCTTAGATACTTGTGTGAGACCCAAATACTCCCGGTCCTGGATGACAAAAGAATCCTCTTAGTTTGGTGGCCATGGCGACCTATATGAGATATTAGTATCTTATGAATTTTGCAATGTATAATTCTGTACAATTAGCTCATGGACATACATACGGTTCTTTGCAAATAGAAAAGGCCCTTGTAGCTTGGAAATTTTCTTCAGTGCGTCGTGATTGGAATTTATAGTATAGATAAACAACTGTGGGCCAAAAGACAAACCTCACCTTTCTTGAAAAATGGAAGGGAAGAAAAAACCCATTCATTAGAAGTTAGAAATAGTCCTCTAGAATCTCAGCTGGCTGATATTTTGTGCTTCGTTCAAAAGACATTATTGAGTTTCTCATTGCAATTCCTATGCTGTCAGGTCGAAGTTGGAAGGCTTCAGAACTACGGCTCAAGTCTTGGGACGATCTTAATAAGTTATGGTATGTCCTCTTGAAGGAGAAAAATATGTTGATGACACAACGCCAGATGCTTCATGCACAAAATCTAAGGTTTCCTAATCCAGAACGCGTTCCCAAGGTATACTTGTCAAAGCTTATGCCTTATGTATTATTTTTAATTTGTAAACATCAGTTCAACCTGCTTTCTATGTTTTGTTGTATTTGTTCCCTCCTCGTGTAATCTTAGAGTTGTTAATAGCTCTCCTTCCACTACTTTTCTATTCTAACGTCGATGGTGGTTGTTGATGATTGTAATTTAGGTGAGGAAGTCAATGTGTCGAATCAAGCAGGTACTTACCGAGAGAGCCATCGAAGAACCAGATCCTCGGAGATCCGCAGAGATGAAGAGGATGATAAACGCTCTTTGATAAGCTAAACAACATTTCAAAGCCAGCCTTGTATGTGGTGGAGTTTACCATCCCGGTTACGAAGGGAGGAATAGTTAGCGAGATAATACAAACACCACCCTATCGATTTCGTTCATTCTGTAATCAAGGATCTGATTAGAAGCCTAGTTATTGTTTTATAATTTCTAATCTAGTTTTTAATCGACGGTAATCAAAGTTTTGGAGATGTTTTTATTTATGCCAACATTATGATGATGGCCAAGCTTATTCTAGAAGATTTGGAATACACACAAATTAGATCTGATGTGTGTGTGTGTGGAGTAAGTTGAAAATGAAAGAGTTGACAAAAGAAAAAAAAAGAAGGAAAAAGGAAAAAAGAAAAGGAAAAATATTGATGGTTTGATGTGCTGTTGGGAAAATGAAAGTAGTATCGTCATGAATGTTAGGAGGACCATAAACACAAAGGTAGAATGTGTGTTGATGCTTTGGCTTTGATGATCCTGTGCCAGTGGCTCATTCCAATTCTATTCCCTACACAAAGGGGGGCAAACCCACATGATTGGATTAGACATCTTGCTTTTTGATTAGCTTCTTAATCAAGATTGTTTATTCATGAGGGGCAGGCAAACAAAGGAGAGGGGCCCTCTTCCTCTTCCTCTTTCC TGTCGGTATTTTACGTCTTGCCCTCAGTTCTTAGTTCCCTCGCAGTTCGCAGACTTGGCGTCGCCACTTCTTCCTCGTCGGAGCGCAGATCGTTGCCGCTTGCCGGAGCCAACCCTTGTTTGAGCCTTTGCAATTCACAATCTTTCCTTTCTGAGTTCAGTCCATCGCACGACCTTCAGAATCGGAGCATTGGTGCAGCCATGTTTCTGACACGAGTGTTTGGGAGAACATTTCTAGCTGCTGCTAGATCAGAAACTTCTTCTGTGACAGCTGCTGCTGCTTCTACAGCTAGGATGGGGTATAATCCGCTCGAGGAGTTTTTTGAGGCCGATAGAAGTCCAGACGATGACAAACCTGTTGTATATGGTCGAAGTTGGAAGGCTTCAGAACTACGGCTCAAGTCTTGGGACGATCTTAATAAGTTATGGTATGTCCTCTTGAAGGAGAAAAATATGTTGATGACACAACGCCAGATGCTTCATGCACAAAATCTAAGGTTTCCTAATCCAGAACGCGTTCCCAAGGTGAGGAAGTCAATGTGTCGAATCAAGCAGGTACTTACCGAGAGAGCCATCGAAGAACCAGATCCTCGGAGATCCGCAGAGATGAAGAGGATGATAAACGCTCTTTGATAAGCTAAACAACATTTCAAAGCCAGCCTTGTATGTGGTGGAGTTTACCATCCCGGTTACGAAGGGAGGAATAGTTAGCGAGATAATACAAACACCACCCTATCGATTTCGTTCATTCTGTAATCAAGGATCTGATTAGAAGCCTAGTTATTGTTTTATAATTTCTAATCTAGTTTTTAATCGACGGTAATCAAAGTTTTGGAGATGTTTTTATTTATGCCAACATTATGATGATGGCCAAGCTTATTCTAGAAGATTTGGAATACACACAAATTAGATCTGATGTGTGTGTGTGTGGAGTAAGTTGAAAATGAAAGAGTTGACAAAAGAAAAAAAAAGAAGGAAAAAGGAAAAAAGAAAAGGAAAAATATTGATGGTTTGATGTGCTGTTGGGAAAATGAAAGTAGTATCGTCATGAATGTTAGGAGGACCATAAACACAAAGGTAGAATGTGTGTTGATGCTTTGGCTTTGATGATCCTGTGCCAGTGGCTCATTCCAATTCTATTCCCTACACAAAGGGGGGCAAACCCACATGATTGGATTAGACATCTTGCTTTTTGATTAGCTTCTTAATCAAGATTGTTTATTCATGAGGGGCAGGCAAACAAAGGAGAGGGGCCCTCTTCCTCTTCCTCTTTCC ATGTTTCTGACACGAGTGTTTGGGAGAACATTTCTAGCTGCTGCTAGATCAGAAACTTCTTCTGTGACAGCTGCTGCTGCTTCTACAGCTAGGATGGGGTATAATCCGCTCGAGGAGTTTTTTGAGGCCGATAGAAGTCCAGACGATGACAAACCTGTTGTATATGGTCGAAGTTGGAAGGCTTCAGAACTACGGCTCAAGTCTTGGGACGATCTTAATAAGTTATGGTATGTCCTCTTGAAGGAGAAAAATATGTTGATGACACAACGCCAGATGCTTCATGCACAAAATCTAAGGTTTCCTAATCCAGAACGCGTTCCCAAGGTGAGGAAGTCAATGTGTCGAATCAAGCAGGTACTTACCGAGAGAGCCATCGAAGAACCAGATCCTCGGAGATCCGCAGAGATGAAGAGGATGATAAACGCTCTTTGA MFLTRVFGRTFLAAARSETSSVTAAAASTARMGYNPLEEFFEADRSPDDDKPVVYGRSWKASELRLKSWDDLNKLWYVLLKEKNMLMTQRQMLHAQNLRFPNPERVPKVRKSMCRIKQVLTERAIEEPDPRRSAEMKRMINAL Homology
BLAST of Tan0005813 vs. ExPASy Swiss-Prot
Match: Q8K2Y7 (39S ribosomal protein L47, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl47 PE=1 SV=2) HSP 1 Score: 77.8 bits (190), Expect = 1.1e-13 Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 0
BLAST of Tan0005813 vs. ExPASy Swiss-Prot
Match: Q08DT6 (39S ribosomal protein L47, mitochondrial OS=Bos taurus OX=9913 GN=MRPL47 PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.9e-13 Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 0
BLAST of Tan0005813 vs. ExPASy Swiss-Prot
Match: Q9HD33 (39S ribosomal protein L47, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL47 PE=1 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 7.2e-13 Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of Tan0005813 vs. ExPASy Swiss-Prot
Match: P87232 (54S ribosomal protein L4, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl4 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.1e-10 Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 0
BLAST of Tan0005813 vs. ExPASy Swiss-Prot
Match: Q2H080 (54S ribosomal protein L4, mitochondrial OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=MRPL4 PE=3 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.3e-09 Identity = 43/104 (41.35%), Postives = 56/104 (53.85%), Query Frame = 0
BLAST of Tan0005813 vs. NCBI nr
Match: XP_038879389.1 (39S ribosomal protein L47, mitochondrial [Benincasa hispida] >XP_038879390.1 39S ribosomal protein L47, mitochondrial [Benincasa hispida]) HSP 1 Score: 272.3 bits (695), Expect = 2.3e-69 Identity = 137/143 (95.80%), Postives = 141/143 (98.60%), Query Frame = 0
BLAST of Tan0005813 vs. NCBI nr
Match: XP_004138121.1 (39S ribosomal protein L47, mitochondrial [Cucumis sativus] >KGN63602.1 hypothetical protein Csa_013761 [Cucumis sativus]) HSP 1 Score: 265.8 bits (678), Expect = 2.2e-67 Identity = 134/143 (93.71%), Postives = 139/143 (97.20%), Query Frame = 0
BLAST of Tan0005813 vs. NCBI nr
Match: XP_008453113.1 (PREDICTED: 39S ribosomal protein L47, mitochondrial [Cucumis melo]) HSP 1 Score: 263.8 bits (673), Expect = 8.3e-67 Identity = 134/143 (93.71%), Postives = 138/143 (96.50%), Query Frame = 0
BLAST of Tan0005813 vs. NCBI nr
Match: XP_022135437.1 (39S ribosomal protein L47, mitochondrial [Momordica charantia]) HSP 1 Score: 262.3 bits (669), Expect = 2.4e-66 Identity = 136/143 (95.10%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of Tan0005813 vs. NCBI nr
Match: XP_023530690.1 (39S ribosomal protein L47, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023530691.1 39S ribosomal protein L47, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023530692.1 39S ribosomal protein L47, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023530693.1 39S ribosomal protein L47, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023530694.1 39S ribosomal protein L47, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023530695.1 39S ribosomal protein L47, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023530697.1 39S ribosomal protein L47, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 261.5 bits (667), Expect = 4.1e-66 Identity = 130/143 (90.91%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of Tan0005813 vs. ExPASy TrEMBL
Match: A0A0A0LS48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005630 PE=3 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67 Identity = 134/143 (93.71%), Postives = 139/143 (97.20%), Query Frame = 0
BLAST of Tan0005813 vs. ExPASy TrEMBL
Match: A0A1S3BWK4 (39S ribosomal protein L47, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493926 PE=3 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 4.0e-67 Identity = 134/143 (93.71%), Postives = 138/143 (96.50%), Query Frame = 0
BLAST of Tan0005813 vs. ExPASy TrEMBL
Match: A0A6J1C2P6 (39S ribosomal protein L47, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007392 PE=3 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66 Identity = 136/143 (95.10%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of Tan0005813 vs. ExPASy TrEMBL
Match: A0A6J1I0P6 (39S ribosomal protein L47, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111467922 PE=3 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 2.6e-66 Identity = 130/143 (90.91%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of Tan0005813 vs. ExPASy TrEMBL
Match: A0A6J1JCZ2 (39S ribosomal protein L47, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111485667 PE=3 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 1.3e-65 Identity = 133/143 (93.01%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of Tan0005813 vs. TAIR 10
Match: AT1G07830.1 (ribosomal protein L29 family protein ) HSP 1 Score: 223.0 bits (567), Expect = 1.5e-58 Identity = 115/144 (79.86%), Postives = 124/144 (86.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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