Tan0005477 (gene) Snake gourd v1

Overview
NameTan0005477
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLEA_2 domain-containing protein
LocationLG03: 62159803 .. 62160703 (+)
RNA-Seq ExpressionTan0005477
SyntenyTan0005477
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAAGGGAGAAGAATGAAATTAAAGCAGGAGGGGGAGCATTTTCTCCATCTACCTGTCTTCTACTCCAATTAATTACAATTAGTTGAGAGTTAGATCCCAATTCCAATGGCACCATAAAATCAAATTCTCCAATCCTCTCTCAAAATCCAAACACCGCCATGGAAGTAGCCTCCAAGGATCCCAAATCCACCGCCGCCGCCCGCTCCCGGCGACGCCGCAACACCTGCATCGGAGTCTCCATCGCCGTCGTCGTCCTCCTCGTCGTTCTAATCGTCATTTTAGCCTTCACAGTCTTCAAAGCCAAGCGCCCTATCACCGTCATCAACTCCGTTGCCCTAGACGACCTCGATGTGTCGCTCAGCATAGCCAGAGTCGCCGTCGGCATCAACGTCACTCTCATCGTCGACATCTCTATCACGAACCCTAACAAGGTCGGATTCAGCTATTCCAACAGCACCGCGCTTCTCAATTACAGAGGCGAACTGGTCGGCGAGGCGCCGATTGTGGCCGGCCGGATCGATGCGAATCAGAGCACGCGGATGAACATCACGCTGACGATAATGGCGGATCGGCTTTTGAAGTCGTCGACGGTGCTCTCCGACATCGTCGCCGGATCGATGCCGTTGAATACGTACGCGAGAATTTCAGGTAAGGTGAGGATTTTGGGGATTTTCACTATTCATGTTGTTTCGACTACGTCCTGTGATCTCACGGTCGATATAACGGAGAGGAAAATTGGAGATCAGCAGTGTAATTATCATACGAAGATCTGATCAATTATGGTTCTTGTTTCGTAAATTATGAACAGATTTGTAGGTGGATTTAGGGCCGTTTTTACACTGTTCTAATTGATTGATTTGGTTTTGTTGCTATTTTTGAAGTGTTCTTTCCTCTGCGA

mRNA sequence

AGAAAAGGGAGAAGAATGAAATTAAAGCAGGAGGGGGAGCATTTTCTCCATCTACCTGTCTTCTACTCCAATTAATTACAATTAGTTGAGAGTTAGATCCCAATTCCAATGGCACCATAAAATCAAATTCTCCAATCCTCTCTCAAAATCCAAACACCGCCATGGAAGTAGCCTCCAAGGATCCCAAATCCACCGCCGCCGCCCGCTCCCGGCGACGCCGCAACACCTGCATCGGAGTCTCCATCGCCGTCGTCGTCCTCCTCGTCGTTCTAATCGTCATTTTAGCCTTCACAGTCTTCAAAGCCAAGCGCCCTATCACCGTCATCAACTCCGTTGCCCTAGACGACCTCGATGTGTCGCTCAGCATAGCCAGAGTCGCCGTCGGCATCAACGTCACTCTCATCGTCGACATCTCTATCACGAACCCTAACAAGGTCGGATTCAGCTATTCCAACAGCACCGCGCTTCTCAATTACAGAGGCGAACTGGTCGGCGAGGCGCCGATTGTGGCCGGCCGGATCGATGCGAATCAGAGCACGCGGATGAACATCACGCTGACGATAATGGCGGATCGGCTTTTGAAGTCGTCGACGGTGCTCTCCGACATCGTCGCCGGATCGATGCCGTTGAATACGTACGCGAGAATTTCAGGTAAGGTGAGGATTTTGGGGATTTTCACTATTCATGTTGTTTCGACTACGTCCTGTGATCTCACGGTCGATATAACGGAGAGGAAAATTGGAGATCAGCAGTGTAATTATCATACGAAGATCTGATCAATTATGGTTCTTGTTTCGTAAATTATGAACAGATTTGTAGGTGGATTTAGGGCCGTTTTTACACTGTTCTAATTGATTGATTTGGTTTTGTTGCTATTTTTGAAGTGTTCTTTCCTCTGCGA

Coding sequence (CDS)

ATGGAAGTAGCCTCCAAGGATCCCAAATCCACCGCCGCCGCCCGCTCCCGGCGACGCCGCAACACCTGCATCGGAGTCTCCATCGCCGTCGTCGTCCTCCTCGTCGTTCTAATCGTCATTTTAGCCTTCACAGTCTTCAAAGCCAAGCGCCCTATCACCGTCATCAACTCCGTTGCCCTAGACGACCTCGATGTGTCGCTCAGCATAGCCAGAGTCGCCGTCGGCATCAACGTCACTCTCATCGTCGACATCTCTATCACGAACCCTAACAAGGTCGGATTCAGCTATTCCAACAGCACCGCGCTTCTCAATTACAGAGGCGAACTGGTCGGCGAGGCGCCGATTGTGGCCGGCCGGATCGATGCGAATCAGAGCACGCGGATGAACATCACGCTGACGATAATGGCGGATCGGCTTTTGAAGTCGTCGACGGTGCTCTCCGACATCGTCGCCGGATCGATGCCGTTGAATACGTACGCGAGAATTTCAGGTAAGGTGAGGATTTTGGGGATTTTCACTATTCATGTTGTTTCGACTACGTCCTGTGATCTCACGGTCGATATAACGGAGAGGAAAATTGGAGATCAGCAGTGTAATTATCATACGAAGATCTGA

Protein sequence

MEVASKDPKSTAAARSRRRRNTCIGVSIAVVVLLVVLIVILAFTVFKAKRPITVINSVALDDLDVSLSIARVAVGINVTLIVDISITNPNKVGFSYSNSTALLNYRGELVGEAPIVAGRIDANQSTRMNITLTIMADRLLKSSTVLSDIVAGSMPLNTYARISGKVRILGIFTIHVVSTTSCDLTVDITERKIGDQQCNYHTKI
Homology
BLAST of Tan0005477 vs. NCBI nr
Match: XP_038882665.1 (uncharacterized protein LOC120073854 [Benincasa hispida])

HSP 1 Score: 315.8 bits (808), Expect = 2.6e-82
Identity = 173/210 (82.38%), Postives = 186/210 (88.57%), Query Frame = 0

Query: 1   MEVAS---KDPKST---AAARSRRRRNTCIGVSIAVVVLLVVLIVILAFTVFKAKRPITV 60
           ME+AS   KDPKST   AAARSRRRRNTCIG+SIA VVLLVVLIVILAFTVFKAKRPIT 
Sbjct: 1   MEIASSSNKDPKSTQSIAAARSRRRRNTCIGISIATVVLLVVLIVILAFTVFKAKRPITA 60

Query: 61  INSVALDDLDVSLSIARVAVGINVTLIVDISITNPNKVGFSYSNSTALLNYRGELVGEAP 120
           INSV L DLDVSL++ARV+V INVTLI D++ITNPNKVGFSYSNSTA LNYRGELVGEAP
Sbjct: 61  INSVTLADLDVSLNLARVSVDINVTLIADVAITNPNKVGFSYSNSTAFLNYRGELVGEAP 120

Query: 121 IVAGRIDANQSTRMNITLTIMADRLLKSSTVLSDIVAGSMPLNTYARISGKVRILGIFTI 180
           I AGRIDA Q   MNITLTIMADRLLK++TV SD+VAG+MPLNTY RISGKVRILGIF I
Sbjct: 121 ITAGRIDAGQRKEMNITLTIMADRLLKTTTVFSDVVAGTMPLNTYTRISGKVRILGIFNI 180

Query: 181 HVVSTTSCDLTVDITERKIGDQQCNYHTKI 205
           HVVSTTSCD  V I+ERK+GDQQCNYHTKI
Sbjct: 181 HVVSTTSCDFNVSISERKVGDQQCNYHTKI 210

BLAST of Tan0005477 vs. NCBI nr
Match: XP_022966458.1 (uncharacterized protein LOC111466106 [Cucurbita maxima])

HSP 1 Score: 315.5 bits (807), Expect = 3.4e-82
Identity = 167/204 (81.86%), Postives = 187/204 (91.67%), Query Frame = 0

Query: 1   MEVASKDPKSTAAARSRRRRNTCIGVSIAVVVLLVVLIVILAFTVFKAKRPITVINSVAL 60
           ME+AS   K   + RSRRRRNTCIGVSIA V+LL+VLIVILAFTVFKAKRPIT INSVAL
Sbjct: 1   MEIASSTTKDPKSIRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPITTINSVAL 60

Query: 61  DDLDVSLSIARVAVGINVTLIVDISITNPNKVGFSYSNSTALLNYRGELVGEAPIVAGRI 120
            DLD+SL+IAR AVG+N+TLIVD+SITNPNKVGFSYSNSTALLNYRGEL+GEAPI +GRI
Sbjct: 61  ADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEAPIPSGRI 120

Query: 121 DANQSTRMNITLTIMADRLLKSSTVLSDIVAGSMPLNTYARISGKVRILGIFTIHVVSTT 180
           +ANQS RMNIT+TIMADRLL+SSTVLSD+VAGSMPLNTY RISGKVRILGIF I VVS+T
Sbjct: 121 NANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKVRILGIFKIRVVSST 180

Query: 181 SCDLTVDITERKIGDQQCNYHTKI 205
           SCD T+DI++RKIGDQQC+YHTKI
Sbjct: 181 SCDFTIDISDRKIGDQQCSYHTKI 204

BLAST of Tan0005477 vs. NCBI nr
Match: XP_023518218.1 (uncharacterized protein LOC111781758 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.3 bits (804), Expect = 7.7e-82
Identity = 171/208 (82.21%), Postives = 190/208 (91.35%), Query Frame = 0

Query: 1   MEVAS----KDPKSTAAARSRRRRNTCIGVSIAVVVLLVVLIVILAFTVFKAKRPITVIN 60
           ME+AS    KDPKS    RSRRRRNTCIGVSIA V+LL+VLIVILAFTVFKAKRPIT IN
Sbjct: 16  MEIASSSSTKDPKS---IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPITTIN 75

Query: 61  SVALDDLDVSLSIARVAVGINVTLIVDISITNPNKVGFSYSNSTALLNYRGELVGEAPIV 120
           SVAL DLD+SL+IAR AVG+N+TLIVD+SITNPNKVGFSYSNSTALLNYRGEL+GEAPI 
Sbjct: 76  SVALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEAPIP 135

Query: 121 AGRIDANQSTRMNITLTIMADRLLKSSTVLSDIVAGSMPLNTYARISGKVRILGIFTIHV 180
           +GRI+ANQS RMNIT+TIMADRLL+SSTVLSD+VAGSMPLNTY RISGKVRILGIF I V
Sbjct: 136 SGRINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKVRILGIFKIRV 195

Query: 181 VSTTSCDLTVDITERKIGDQQCNYHTKI 205
           VS+TSCD T+DI++RKIGDQQC+YHTKI
Sbjct: 196 VSSTSCDFTIDISDRKIGDQQCSYHTKI 220

BLAST of Tan0005477 vs. NCBI nr
Match: KAG6595530.1 (Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 313.5 bits (802), Expect = 1.3e-81
Identity = 170/206 (82.52%), Postives = 190/206 (92.23%), Query Frame = 0

Query: 1   MEVAS--KDPKSTAAARSRRRRNTCIGVSIAVVVLLVVLIVILAFTVFKAKRPITVINSV 60
           ME+AS  KDPKS    RSRRRRNTCIGVSIA V+LL+VLIVILAFTVFKAKRPIT INSV
Sbjct: 1   MEIASSTKDPKS---IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPITAINSV 60

Query: 61  ALDDLDVSLSIARVAVGINVTLIVDISITNPNKVGFSYSNSTALLNYRGELVGEAPIVAG 120
           AL DLD+SL+IAR AVG+N+TLIVD+SITNPNKVGFSYSNSTALLNYRGEL+GEAPI +G
Sbjct: 61  ALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEAPIPSG 120

Query: 121 RIDANQSTRMNITLTIMADRLLKSSTVLSDIVAGSMPLNTYARISGKVRILGIFTIHVVS 180
           RI+ANQS RMNIT+TIMADRLL+SSTVLSD+VAGS+PLNTY RISGKVRILGIF I VVS
Sbjct: 121 RINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSIPLNTYTRISGKVRILGIFKIRVVS 180

Query: 181 TTSCDLTVDITERKIGDQQCNYHTKI 205
           +TSCD T+DI++RKIGDQQC+YHTKI
Sbjct: 181 STSCDFTIDISDRKIGDQQCSYHTKI 203

BLAST of Tan0005477 vs. NCBI nr
Match: XP_022924899.1 (uncharacterized protein LOC111432307 [Cucurbita moschata])

HSP 1 Score: 313.5 bits (802), Expect = 1.3e-81
Identity = 170/206 (82.52%), Postives = 190/206 (92.23%), Query Frame = 0

Query: 1   MEVAS--KDPKSTAAARSRRRRNTCIGVSIAVVVLLVVLIVILAFTVFKAKRPITVINSV 60
           ME+AS  KDPKS    RSRRRRNTCIGVSIA V+LL+VLIVILAFTVFKAKRPIT INSV
Sbjct: 16  MEIASSTKDPKS---IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPITAINSV 75

Query: 61  ALDDLDVSLSIARVAVGINVTLIVDISITNPNKVGFSYSNSTALLNYRGELVGEAPIVAG 120
           AL DLD+SL+IAR AVG+N+TLIVD+SITNPNKVGFSYSNSTALLNYRGEL+GEAPI +G
Sbjct: 76  ALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEAPIPSG 135

Query: 121 RIDANQSTRMNITLTIMADRLLKSSTVLSDIVAGSMPLNTYARISGKVRILGIFTIHVVS 180
           RI+ANQS RMNIT+TIMADRLL+SSTVLSD+VAGS+PLNTY RISGKVRILGIF I VVS
Sbjct: 136 RINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSIPLNTYTRISGKVRILGIFKIRVVS 195

Query: 181 TTSCDLTVDITERKIGDQQCNYHTKI 205
           +TSCD T+DI++RKIGDQQC+YHTKI
Sbjct: 196 STSCDFTIDISDRKIGDQQCSYHTKI 218

BLAST of Tan0005477 vs. ExPASy TrEMBL
Match: A0A6J1HS80 (uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.7e-82
Identity = 167/204 (81.86%), Postives = 187/204 (91.67%), Query Frame = 0

Query: 1   MEVASKDPKSTAAARSRRRRNTCIGVSIAVVVLLVVLIVILAFTVFKAKRPITVINSVAL 60
           ME+AS   K   + RSRRRRNTCIGVSIA V+LL+VLIVILAFTVFKAKRPIT INSVAL
Sbjct: 1   MEIASSTTKDPKSIRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPITTINSVAL 60

Query: 61  DDLDVSLSIARVAVGINVTLIVDISITNPNKVGFSYSNSTALLNYRGELVGEAPIVAGRI 120
            DLD+SL+IAR AVG+N+TLIVD+SITNPNKVGFSYSNSTALLNYRGEL+GEAPI +GRI
Sbjct: 61  ADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEAPIPSGRI 120

Query: 121 DANQSTRMNITLTIMADRLLKSSTVLSDIVAGSMPLNTYARISGKVRILGIFTIHVVSTT 180
           +ANQS RMNIT+TIMADRLL+SSTVLSD+VAGSMPLNTY RISGKVRILGIF I VVS+T
Sbjct: 121 NANQSKRMNITVTIMADRLLRSSTVLSDVVAGSMPLNTYTRISGKVRILGIFKIRVVSST 180

Query: 181 SCDLTVDITERKIGDQQCNYHTKI 205
           SCD T+DI++RKIGDQQC+YHTKI
Sbjct: 181 SCDFTIDISDRKIGDQQCSYHTKI 204

BLAST of Tan0005477 vs. ExPASy TrEMBL
Match: A0A6J1EAI5 (uncharacterized protein LOC111432307 OS=Cucurbita moschata OX=3662 GN=LOC111432307 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 6.3e-82
Identity = 170/206 (82.52%), Postives = 190/206 (92.23%), Query Frame = 0

Query: 1   MEVAS--KDPKSTAAARSRRRRNTCIGVSIAVVVLLVVLIVILAFTVFKAKRPITVINSV 60
           ME+AS  KDPKS    RSRRRRNTCIGVSIA V+LL+VLIVILAFTVFKAKRPIT INSV
Sbjct: 16  MEIASSTKDPKS---IRSRRRRNTCIGVSIATVLLLIVLIVILAFTVFKAKRPITAINSV 75

Query: 61  ALDDLDVSLSIARVAVGINVTLIVDISITNPNKVGFSYSNSTALLNYRGELVGEAPIVAG 120
           AL DLD+SL+IAR AVG+N+TLIVD+SITNPNKVGFSYSNSTALLNYRGEL+GEAPI +G
Sbjct: 76  ALADLDLSLNIARSAVGLNITLIVDVSITNPNKVGFSYSNSTALLNYRGELIGEAPIPSG 135

Query: 121 RIDANQSTRMNITLTIMADRLLKSSTVLSDIVAGSMPLNTYARISGKVRILGIFTIHVVS 180
           RI+ANQS RMNIT+TIMADRLL+SSTVLSD+VAGS+PLNTY RISGKVRILGIF I VVS
Sbjct: 136 RINANQSKRMNITVTIMADRLLRSSTVLSDVVAGSIPLNTYTRISGKVRILGIFKIRVVS 195

Query: 181 TTSCDLTVDITERKIGDQQCNYHTKI 205
           +TSCD T+DI++RKIGDQQC+YHTKI
Sbjct: 196 STSCDFTIDISDRKIGDQQCSYHTKI 218

BLAST of Tan0005477 vs. ExPASy TrEMBL
Match: A0A1S3CJB5 (uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80
Identity = 166/216 (76.85%), Postives = 189/216 (87.50%), Query Frame = 0

Query: 1   MEVAS------KDPKST------AAARSRRRRNTCIGVSIAVVVLLVVLIVILAFTVFKA 60
           ME+AS      KDPKST      AAARSR+RRNTCIG+SIA+++LL++LI+ILAFTVFKA
Sbjct: 1   MEIASSSSSSIKDPKSTQSAAAAAAARSRKRRNTCIGISIAILLLLIILIIILAFTVFKA 60

Query: 61  KRPITVINSVALDDLDVSLSIARVAVGINVTLIVDISITNPNKVGFSYSNSTALLNYRGE 120
           KRPIT +NSVAL DLDVSL++ARV+V INVTLI  I+ITNPNKVGFSY NSTA LNYRGE
Sbjct: 61  KRPITTVNSVALADLDVSLNLARVSVDINVTLIAGIAITNPNKVGFSYKNSTAFLNYRGE 120

Query: 121 LVGEAPIVAGRIDANQSTRMNITLTIMADRLLKSSTVLSDIVAGSMPLNTYARISGKVRI 180
           LVGEAPI+AG+IDA +   MNITLTIMADRLLK++TV SD+VAGSMPLNTYARISGKV+I
Sbjct: 121 LVGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFSDVVAGSMPLNTYARISGKVKI 180

Query: 181 LGIFTIHVVSTTSCDLTVDITERKIGDQQCNYHTKI 205
           LGIF IHVVSTTSCD  VDI+ERK+GDQQCNYHTKI
Sbjct: 181 LGIFNIHVVSTTSCDFNVDISERKVGDQQCNYHTKI 216

BLAST of Tan0005477 vs. ExPASy TrEMBL
Match: A0A0A0L094 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.9e-78
Identity = 162/215 (75.35%), Postives = 186/215 (86.51%), Query Frame = 0

Query: 1   MEVAS------KDPKST-----AAARSRRRRNTCIGVSIAVVVLLVVLIVILAFTVFKAK 60
           ME+AS      KDPKST     AA RSR+RRNTCIG+SIA+++LL+++I+ILAFTVFKAK
Sbjct: 1   MEIASSSSSLIKDPKSTQSTAAAATRSRKRRNTCIGISIAILLLLIIIIIILAFTVFKAK 60

Query: 61  RPITVINSVALDDLDVSLSIARVAVGINVTLIVDISITNPNKVGFSYSNSTALLNYRGEL 120
           RPIT +NSVAL DLDVSL++A V+V INVTLI DI+ITNPNKVGFSY NSTA LNYRGEL
Sbjct: 61  RPITTVNSVALADLDVSLNLAGVSVDINVTLIADIAITNPNKVGFSYKNSTAFLNYRGEL 120

Query: 121 VGEAPIVAGRIDANQSTRMNITLTIMADRLLKSSTVLSDIVAGSMPLNTYARISGKVRIL 180
           VGEAPI+AG+IDA +   MNITLTIMADRLLK++TV +D VAGSMPLNTY RISGKV+IL
Sbjct: 121 VGEAPIMAGKIDAGERKEMNITLTIMADRLLKTTTVFTDAVAGSMPLNTYTRISGKVKIL 180

Query: 181 GIFTIHVVSTTSCDLTVDITERKIGDQQCNYHTKI 205
           GIF IHVVS+TSCD  VDI+ERKIGDQQCNYHTKI
Sbjct: 181 GIFNIHVVSSTSCDFNVDISERKIGDQQCNYHTKI 215

BLAST of Tan0005477 vs. ExPASy TrEMBL
Match: A0A6J1DQ35 (uncharacterized protein LOC111023175 OS=Momordica charantia OX=3673 GN=LOC111023175 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.6e-77
Identity = 167/209 (79.90%), Postives = 184/209 (88.04%), Query Frame = 0

Query: 1   MEVAS---KDPKS-TAAARSRRRRNTCIGVSIAVVVLLVVLIVILAFTVFKAKRPITVIN 60
           ME+AS   KD KS TAAARSRRRRN CIG S+  ++LLV+LI+ILAFTVFKA+RPIT IN
Sbjct: 1   MEIASSATKDLKSTTAAARSRRRRNICIGASLGALLLLVILILILAFTVFKARRPITAIN 60

Query: 61  SVALDDLDVSLSIARVAVGINVTLIVDISITNPNKVGFSYSNSTALLNYRGELVGEAPIV 120
           SVAL DL VSL IARVAV INVTLI  +++TNPNKVGFSYSNSTALLNYRGELVGEAPI 
Sbjct: 61  SVALADLAVSLDIARVAVDINVTLIAAVAVTNPNKVGFSYSNSTALLNYRGELVGEAPIP 120

Query: 121 AGRIDANQSTRMNITLTIMADRLL-KSSTVLSDIVAGSMPLNTYARISGKVRILGIFTIH 180
           AGRIDA+QS  MNITLTIMADRLL KS+ V SD+VAGSMPLNTY RISG+V+ILGIF IH
Sbjct: 121 AGRIDADQSKDMNITLTIMADRLLSKSAAVFSDVVAGSMPLNTYTRISGRVKILGIFKIH 180

Query: 181 VVSTTSCDLTVDITERKIGDQQCNYHTKI 205
           VVSTTSCDLT+DI+ RKIGDQQCNYHTKI
Sbjct: 181 VVSTTSCDLTIDISSRKIGDQQCNYHTKI 209

BLAST of Tan0005477 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 189.9 bits (481), Expect = 2.0e-48
Identity = 97/204 (47.55%), Postives = 148/204 (72.55%), Query Frame = 0

Query: 1   MEVASKDPKSTAAARSRRRRNTCIGVSIAVVVLLVVLIVILAFTVFKAKRPITVINSVAL 60
           ME  S +  +    R +R    CI  +I +++L+ ++IVILAFT+FK KRP T I+SV +
Sbjct: 32  METQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVTV 91

Query: 61  DDLDVSLSIARVAVGINVTLIVDISITNPNKVGFSYSNSTALLNYRGELVGEAPIVAGRI 120
           D L  S++   + V +N+TL VD+S+ NPN++GFSY +S+ALLNYRG+++GEAP+ A RI
Sbjct: 92  DRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRI 151

Query: 121 DANQSTRMNITLTIMADRLLKSSTVLSDIVAGSMPLNTYARISGKVRILGIFTIHVVSTT 180
            A ++  +NITLT+MADRLL  + +LSD++AG +PLNT+ +++GKV +L IF I V S++
Sbjct: 152 AARKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSS 211

Query: 181 SCDLTVDITERKIGDQQCNYHTKI 205
           SCDL++ +++R +  Q C Y TK+
Sbjct: 212 SCDLSISVSDRNVTSQHCKYSTKL 235

BLAST of Tan0005477 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 112.8 bits (281), Expect = 3.2e-25
Identity = 70/192 (36.46%), Postives = 117/192 (60.94%), Query Frame = 0

Query: 9   KSTAAARSRRRRNTCIGVSIAVVVLLVVLIVILAFTVFKAKRPITVINSVALDDLDVSLS 68
           K+T  +R+R + + C+    A  ++L  +++ L FTVF+ K PI  +N V ++ LD    
Sbjct: 27  KNTHRSRNRIKCSICV---TATSLILTTIVLTLVFTVFRVKDPIIKMNGVMVNGLDSVTG 86

Query: 69  IARV-AVGINVTLIVDISITNPNKVGFSYSNSTALLNYRGELVGEAPIVAGRIDANQSTR 128
             +V  +G N+++IVD+S+ NPN   F YSN+T  + Y+G LVGEA  + G+   ++++R
Sbjct: 87  TNQVQLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHRTSR 146

Query: 129 MNITLTIMADRLLKSSTVLSDIV-AGSMPLNTYARISGKVRILGIFTIHVVSTTSCDLTV 188
           MN+T+ IM DR+L    +  +I  +G + + +Y R+ GKV+I+GI   HV    +C + V
Sbjct: 147 MNVTVDIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVKMNCTMAV 206

Query: 189 DITERKIGDQQC 199
           +IT + I D  C
Sbjct: 207 NITGQAIQDVDC 215

BLAST of Tan0005477 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 80.1 bits (196), Expect = 2.3e-15
Identity = 53/188 (28.19%), Postives = 96/188 (51.06%), Query Frame = 0

Query: 18  RRRNTCIGVSIAVVVLLVVLIVILAFTVFKAKRPITVINSVALDDLDVSLSIARVAVGIN 77
           +RR  CI   I  V+ ++ +  ++   VFK K PI    S  +D +  ++S+    V +N
Sbjct: 3   KRRICCIVSGIIFVLFVIFMTALILAQVFKPKHPILQTVSSTVDGISTNISLP-YEVQLN 62

Query: 78  VTLIVDISITNPNKVGFSYSNSTALLNYRGELVGEAPIVAGRIDANQSTRMNITLTIMAD 137
            TL +++ + NPN   F Y     L+ YR  LVG   + +  + A  S  +   L +  D
Sbjct: 63  FTLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLD 122

Query: 138 RLLKS-STVLSDIVAGSMPLNTYARISGKVRILGIFTIHVVSTTSCDLTVDITERKIGDQ 197
           + + +   ++ D++ G + + T A++ GK+ +LGIF I + S + C+L +      + DQ
Sbjct: 123 KFVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVEDQ 182

Query: 198 QCNYHTKI 205
            C+  TK+
Sbjct: 183 VCDLKTKL 189

BLAST of Tan0005477 vs. TAIR 10
Match: AT4G23930.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 58.2 bits (139), Expect = 9.2e-09
Identity = 46/184 (25.00%), Postives = 89/184 (48.37%), Query Frame = 0

Query: 27  SIAVVVLLVVLIVILA----FTVFKAKRPITVINSVALDDLDVSLSIARVAVGINVTLIV 86
           S AV  L +V ++I A     TVF+ + P   + SV +    V+ S       ++ T   
Sbjct: 10  SCAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVANS------SVSFTFSQ 69

Query: 87  DISITNPNKVGFSYSNSTALLNYRGELVGEAPIVAGRIDANQSTRMNITLTIMADRLLKS 146
             ++ NPN+  FS+ N+   L Y G  +G   + AG I++ ++ RM  T ++ +  L  +
Sbjct: 70  FSAVRNPNRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPLAAA 129

Query: 147 STVL--------SDIVAGSMPLNTYARISGKVRILGIFTIHVVSTTSCDLTVDITERKIG 199
           S+          SD    ++ + +   ++G+VR+LG+FT  + +  +C + +  ++  I 
Sbjct: 130 SSSQISAAQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRIAISSSDGSIV 187

BLAST of Tan0005477 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 53.1 bits (126), Expect = 3.0e-07
Identity = 47/149 (31.54%), Postives = 77/149 (51.68%), Query Frame = 0

Query: 8   PKSTAAARSRRRRNTCIGVSIAVVVLLVVLIVILAFTVFKAKRPITVINSVALDDLDVSL 67
           P     +  R    +C   ++ +++LLVVL+V+  FTVFK K P   +N+V L    VS 
Sbjct: 4   PHDRRRSSGRTNLASCAVATVFLLILLVVLLVVY-FTVFKPKDPKISVNAVQLPSFAVSN 63

Query: 68  SIARVAVGINVTLIVDISITNPNKVGFSYSNSTALLNYRGELVGEAPIVAGRIDANQSTR 127
           + A      N +    +++ NPN+  FS+ +S+  L Y G  VG   I AG+ID+ +   
Sbjct: 64  NTA------NFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQY 123

Query: 128 MNITLTIMADRLL-KSSTVLSDIVAGSMP 156
           M  T T+ +  +   SS+ +S + A  +P
Sbjct: 124 MAATFTVHSFPISPPSSSAISTVSAAVIP 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038882665.12.6e-8282.38uncharacterized protein LOC120073854 [Benincasa hispida][more]
XP_022966458.13.4e-8281.86uncharacterized protein LOC111466106 [Cucurbita maxima][more]
XP_023518218.17.7e-8282.21uncharacterized protein LOC111781758 [Cucurbita pepo subsp. pepo][more]
KAG6595530.11.3e-8182.52Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_022924899.11.3e-8182.52uncharacterized protein LOC111432307 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A6J1HS801.7e-8281.86uncharacterized protein LOC111466106 OS=Cucurbita maxima OX=3661 GN=LOC111466106... [more]
A0A6J1EAI56.3e-8282.52uncharacterized protein LOC111432307 OS=Cucurbita moschata OX=3662 GN=LOC1114323... [more]
A0A1S3CJB51.2e-8076.85uncharacterized protein LOC103501497 OS=Cucumis melo OX=3656 GN=LOC103501497 PE=... [more]
A0A0A0L0941.9e-7875.35LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337360 PE=4 ... [more]
A0A6J1DQ353.6e-7779.90uncharacterized protein LOC111023175 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
AT3G54200.12.0e-4847.55Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G46150.13.2e-2536.46Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G05975.12.3e-1528.19Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT4G23930.19.2e-0925.00Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G64450.13.0e-0731.54Glycine-rich protein family [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 84..176
e-value: 2.8E-12
score: 47.1
NoneNo IPR availableGENE3D2.60.40.1820coord: 39..187
e-value: 7.0E-12
score: 47.4
NoneNo IPR availablePANTHERPTHR31852:SF122LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 13..203
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 13..203
NoneNo IPR availableSUPERFAMILY117070LEA14-likecoord: 77..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0005477.1Tan0005477.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane