Tan0005461 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGTAACAGAATATGAGAAGAAGTTCACAGAATTATCAAAGTATGCTAGCACTATTGTTGCAAACGAGATAGATCGATGCAAGAGGTTCGAGGATGGTCTACGAACAGAGATCAGAACGCCTGTGACAGCAAGTTCGGAGTGGGTTGAGTTCTCCAAGCTTGTTGAGACGACATTACGGGTAGAGCGAAGCCTGGTAGATGACAGAATGGGAAAATGA ATGACAGTAACAGAATATGAGAAGAAGTTCACAGAATTATCAAAGTATGCTAGCACTATTGTTGCAAACGAGATAGATCGATGCAAGAGGTTCGAGGATGGTCTACGAACAGAGATCAGAACGCCTGTGACAGCAAGTTCGGAGTGGGTTGAGTTCTCCAAGCTTGTTGAGACGACATTACGGGTAGAGCGAAGCCTGGTAGATGACAGAATGGGAAAATGA ATGACAGTAACAGAATATGAGAAGAAGTTCACAGAATTATCAAAGTATGCTAGCACTATTGTTGCAAACGAGATAGATCGATGCAAGAGGTTCGAGGATGGTCTACGAACAGAGATCAGAACGCCTGTGACAGCAAGTTCGGAGTGGGTTGAGTTCTCCAAGCTTGTTGAGACGACATTACGGGTAGAGCGAAGCCTGGTAGATGACAGAATGGGAAAATGA MTVTEYEKKFTELSKYASTIVANEIDRCKRFEDGLRTEIRTPVTASSEWVEFSKLVETTLRVERSLVDDRMGK Homology
BLAST of Tan0005461 vs. NCBI nr
Match: KAA0036813.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 98.2 bits (243), Expect = 3.1e-17 Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Tan0005461 vs. NCBI nr
Match: TYJ95881.1 (retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]) HSP 1 Score: 98.2 bits (243), Expect = 3.1e-17 Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Tan0005461 vs. NCBI nr
Match: KAA0060484.1 (Gag protease polyprotein-like protein [Cucumis melo var. makuwa] >TYK18569.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 97.8 bits (242), Expect = 4.0e-17 Identity = 44/66 (66.67%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Tan0005461 vs. NCBI nr
Match: KAA0035225.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21839.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 97.8 bits (242), Expect = 4.0e-17 Identity = 44/66 (66.67%), Postives = 58/66 (87.88%), Query Frame = 0
BLAST of Tan0005461 vs. NCBI nr
Match: KAA0035138.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 97.1 bits (240), Expect = 6.9e-17 Identity = 45/70 (64.29%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of Tan0005461 vs. ExPASy TrEMBL
Match: A0A5D3BB91 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001760 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.5e-17 Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Tan0005461 vs. ExPASy TrEMBL
Match: A0A5A7T1M0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001070 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.5e-17 Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Tan0005461 vs. ExPASy TrEMBL
Match: A0A5A7UZM6 (Gag protease polyprotein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00750 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.0e-17 Identity = 44/66 (66.67%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of Tan0005461 vs. ExPASy TrEMBL
Match: A0A5D3DES5 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold991G00660 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.0e-17 Identity = 44/66 (66.67%), Postives = 58/66 (87.88%), Query Frame = 0
BLAST of Tan0005461 vs. ExPASy TrEMBL
Match: A0A5A7SX06 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002230 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.3e-17 Identity = 45/70 (64.29%), Postives = 59/70 (84.29%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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