Tan0004982 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCAGTGCATGGTATGTTTGGACAACAGTCTACACAGGTCCGACACAATGCCCTCAAGTATATATTCAACTCGAAGATGCTAGAGGGTACATCTGTTCGGGATCATGTCCTGGATATGATGGTACACTTTAACATCGCTGAGTCGAATGGTGCTTCCATCGATGAATCGAGCCAAGTCAGCTTCATTCTGAAAACTCTTTCAGATAGTTTCCTATAG ATGGATTCAGTGCATGGTATGTTTGGACAACAGTCTACACAGGTCCGACACAATGCCCTCAAGTATATATTCAACTCGAAGATGCTAGAGGGTACATCTGTTCGGGATCATGTCCTGGATATGATGGTACACTTTAACATCGCTGAGTCGAATGGTGCTTCCATCGATGAATCGAGCCAAGTCAGCTTCATTCTGAAAACTCTTTCAGATAGTTTCCTATAG ATGGATTCAGTGCATGGTATGTTTGGACAACAGTCTACACAGGTCCGACACAATGCCCTCAAGTATATATTCAACTCGAAGATGCTAGAGGGTACATCTGTTCGGGATCATGTCCTGGATATGATGGTACACTTTAACATCGCTGAGTCGAATGGTGCTTCCATCGATGAATCGAGCCAAGTCAGCTTCATTCTGAAAACTCTTTCAGATAGTTTCCTATAG MDSVHGMFGQQSTQVRHNALKYIFNSKMLEGTSVRDHVLDMMVHFNIAESNGASIDESSQVSFILKTLSDSFL Homology
BLAST of Tan0004982 vs. NCBI nr
Match: TYK28896.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 106.7 bits (265), Expect = 8.7e-20 Identity = 51/73 (69.86%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of Tan0004982 vs. NCBI nr
Match: KAA0046415.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19 Identity = 51/73 (69.86%), Postives = 65/73 (89.04%), Query Frame = 0
BLAST of Tan0004982 vs. NCBI nr
Match: KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 105.1 bits (261), Expect = 2.5e-19 Identity = 50/73 (68.49%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of Tan0004982 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 105.1 bits (261), Expect = 2.5e-19 Identity = 50/73 (68.49%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of Tan0004982 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 105.1 bits (261), Expect = 2.5e-19 Identity = 50/73 (68.49%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of Tan0004982 vs. ExPASy TrEMBL
Match: A0A5D3DYU3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2406G00160 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.2e-20 Identity = 51/73 (69.86%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of Tan0004982 vs. ExPASy TrEMBL
Match: A0A5A7TYF5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G001600 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.5e-20 Identity = 51/73 (69.86%), Postives = 65/73 (89.04%), Query Frame = 0
BLAST of Tan0004982 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19 Identity = 50/73 (68.49%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of Tan0004982 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19 Identity = 50/73 (68.49%), Postives = 64/73 (87.67%), Query Frame = 0
BLAST of Tan0004982 vs. ExPASy TrEMBL
Match: A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.2e-19 Identity = 50/73 (68.49%), Postives = 64/73 (87.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|