Tan0004524 (gene) Snake gourd v1

Overview
NameTan0004524
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase domain-containing protein
LocationLG04: 13181817 .. 13186272 (-)
RNA-Seq ExpressionTan0004524
SyntenyTan0004524
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGACACACGAAGAACGTTAGAAAACGAACTGTTGTATTACGACAGAGAAATCCTTCTCTTAGACGAGCCCAAGGGATCACGACATTTCGCAGACCATGAATTTCGGTACGCTTCTTTTTGGATTCATATCCACAATCTACCCTCCGCAGGTTAGACAAAGAGGATGGTATAGATATATGGGAACCGGCTAGGACAATTTCAATAGGTAGACTCCTTCGAGTTGGATTTCTGTTGGGGGAGCACTATTCGCATCAGAAGGATTAATCTTACAGAACTGCTGAGGAGAGGGTTGAAGGTGAAAATTGAAGTGATGGTCGAGGAGGCATGATGTCCAGTGACCTACGAGAAGCTCCCAGATTTCTGCTACAGATGCGGAAGAATCGTTAATACATAACGTGAATGCCCTTTCAAAGTCGATATTGAGCCAGAGGGGAAACAATTCGAACCTAATCTCTGACATCCCATTTCACACGAGGCATCTCTGGCCAGTTTTTGTTCGAGGAGCATGGACTCCAGAGGACGAGGGAGATCCAACCGAGGGTGAAACGAGGGTTCAGGGCATCGACGAATGAAGGAGGAAAACTCGGGAGAGATACAAAATAAAGCCGCCTCTCAACCCCTTTGGCTCAGGCGAGCGGAGGTGGCTCATCGGCGACACAACAAAAGAAGCAGGAAGCTACCGACGACAATGGCTCAAGAAAGATTTTCGATGAATTTAAAATTATCCTAAATGCTATTAACTTTTCAGCTACAACGAATCCAAAGGAGGAACTTGCGGCGGGATCCATGGAACATTCAAAAGCGCCCCGAAAGGTAAAGAAAGTTGTCGTTACGGAAGTCACCAAGGCGTTAGGGTTTGAGGAATCAGTTTCGGATGGAAAAAGTGAAGATGAAGGGAAACAACGATTTTCGAAGGAGACGGTTGTGGGACCCACAATAATTAATCGACCACGAGCAAAGATGGATAAGTTGGCAAGAAAATTGAATCCAAGCGGTGAAGGAAATGGGTCGAATGACTTATTGGGCCTAATTTTTAATGTGGGTTGTGACTCGTCTAAGATTAAGTTGGACCACAATGTCGGGCCTCGTGGTTCGGCGAGCTGTAATCCGAAGAAGAAACTAGAGATGGGTGTCGTGGGCCTCAAAAAGTCCAACAAGGTTTCAGGCCAGAAGAGAATCCAAGGAAAACTATCAGAAGAAGGTCCAAACAAAAAGCAACGAACTGACGATGGAGCGTCTACCGAAAGGAAAGTTTCTAATTTAGGTGAGAAAATCCCCATTTTATTGGTGGAGGTTGCGATGCAACCAGCCACCATACATGAGTTTCTTATGTTGGAATGTGCGAGGATTAAGGAACCCTCGTACATTCCATGCGTGAGACCATTTAGTGTGAAGGCTAAAACCCCATATTGTTTTTATTTCCGAATTTAAAACTTGTGCTAGCAAGAATGATTAAATAAAATCAAATCTAAATTTTGATTATTGCTTTTCGATTCCCAGTAATGGTAAAAGTGGGGGTCTTTTGCTCTTGTGGAATAAAAATACTAATCTAAAAATCACATCGTTCTCTGCAGGACATATTGACTCAATAATTTCGGACAATAGCGGTAACTGGTGTTTTACAGGTTTTATGGTAACCCACATACAGAGCAACGCAGGCATTCTTAGGATTTGTTGAAACGATTGCACAACCAATTTGACCTCCCTTGGGTTATTGGTGGAGATTTTAATGAAATCCTAGCTGACAACGAAAAGCAGGGAGGAGTCTTAGAGAAGCTCAGATGGATGGGTTCAGAAAGGTGTTGGATGATTGCAACCTGGTGGATCCAGGGTTTCAGGGACATGAGTTCACCTGGGTTAGGAAGGTATCCAACGGTCCTTCTACCTGGGAACGTTTGGATTGTTTTCTTCTGAACATGAGTTATTATTCCAGATGGAGGCAGTTCCAGGTTACTCATTTAGGTTTCTATTCCTCGGACCATAGACCAATTTTTAGTTATATCTTTGGGGACTTCAACTCCCCCAGCCGACATGGCAAGGGCTCTTTGAGATTCGAACCCGGCTGGACTAAAATTCCAGAGGCCAAAGAAATTGTGGCTAGGTCTTGGCAACTACTAACCCCCCTACGACAAATGACCTTTAGGACCATCTAGCACAGTGCTCAGTAGAGTTGAAAAGGTGGAACCACCGTCGCATGGGTGGCTCGATTCGGGGTTCATTCAAAGGAAGGAGGTTGAAATAAAAAATTTGGAGTCTGACTTAACACAAGATAAGAAGGGGATTTGGAAATAGAAAATGACAGAACTAGAGGATCTACTGGAAGAAGATAACCTTTACTGGCAACAGAGGTCAAGGGAAGATTTTTGCAATGGGGTGACCGCAATACAAAGTGGTTTCATATTAGAGCAACGACATGCTGTAAGAAAAATCGTATTCAGGGCCTGCTTAATAGTTCTGGTGACTGGATCACAAGTGAGGATTAAATGGGCAGGTTGGCTACTTCGTTTTTTGCCAAGTTATTCAGCTCTAACCCGCTAGACCCCAAGGCAATAGAGGAAGTTATTCGAAGTATCCCTCAAACAATTTCGGAGGATACTAATAATTGGCCTTTAAAAGACTTCACAAGAATGGAGATTGAGGAGGTGATAAAGGGTATGAGTCCTTTTAAAGCTCTTGGGTCGGATGGAGTTCATGCAGGTTTCTTTCAAGTTTATTGGGGCATAGTTGGAGGAAATTTTATGGATATCTGTTTAGGCTTCTTGAATGGAAACTCCGAGATAAAGAACATGAATCAAACATTATTAGCATTAATCCCTAAGAAAAGTGATTCGGGCAAGTTAGAGGACTTTAGACCAATCAGTCTTTGCAATGTGGCTTATAAGGTTATTGTTAAAGGTTTAGCTAATAGGCTGAAAAAAGTCCTAAACCTGGTAATTTCTCCAGAAAAGTCAACATCCATCCCAAGTAGACTAATCACAGATAACGGGCTCATAGGCTTTGAATGTCTTCATGCAATCAACAAAAAACGGAGCAGTCTGACGGGCTCAATAGTGTTGAAACTTGATATGAGCAAAGCATATGGCAGGGTTGAATGGAGCTATCTCCAGCAAGTCATGTTAAAAATGGGGTTTCACCATCGCTAGGTTGACAAGGTTATGAAGTGTGTTGAATCAGTCAGCTTCTCGGTCCTACTGAATGGCAAAGCCTAGGCTTTTTTCCACCCCACCCAGGGACTTCGACAGGGAGACCCTCTTTCCCCTTACCTTTTTTATTATTTGTGTTGAAGGTTTTTCTGCTCTACTTCACAGAGAGCGGACTCTTAACAATTTCAATGGTCTAAAAAATAACCGTTTCTGCCCTGTTATTTCTCACATTTTCTATGCAGATGACAGTATAATTTTTTTTCAGGGCTCATCCGCAGGACATTTGAACAATTACATAGGTATTGTGCTGCTACGAACAGGCCTTAGGATAGATAGTTAACCTTGAATAATCCGTTTTTATGGTGAGCAAGAATACGACCACAGACATGATGGAGTTGATCAGCCAGTCCCTCAATGTTTGCCACACAGAGTCCCTAGGATGTTACTTAGGCATACCCTCCCAGAATTCCAGAAATAAGGCACAAATCTTTAGGACAATTAAAGATCGGGTATGGCAAATTCTGCGGGGCTGACGAGGTAAGTTATTTTTAGTTGGGGGAAAGGAAGTGCTCATAAAGGTAGTGACTCAAGCCATTCCAGTGTACACGATGAGTTATTTTCGCTTACCGAAAGGTCTCTGCACGAACTTGGTGGGTATCCAATAATAGGGGTCGACGAATCCATTGGCAACGTTGGGACCGACTCTGTCCACCGAAAGAAGACGAAGGTATGGGTTTCAGAGATCTCTCTTTATTTAACCAGGTCATGTTAGCTAAGTAAAGTTGGTGACTTCTTCGACAGCAGGACAGTCTTTTTTATCGGATCCTCCGTGGCCGCTATTTTCAGACAGAAAATTTTCTCAATGCTATCCTGGGTTCTAATCCGTCCTTTTCTTGGCGAAGTATTTTATGGGGGCGAGACCTTTTTAAGAAAGGTTACAGATGGAAGATTGGAAATGGTTGCCAGGTAACTATCATGAATGACTCCTGGTTTATAAGTGATGATCGGGTGCATCCCAAGGAGGTTGCTCCTACCTTTGCCCAAGGCTCCGTCCAGTTTATTCTAAGGGAAGACGGTTCTTGGGATGTAGAGAAGATTAAGAGAAACTTCCACTTGGTGGATGTGCGCCATATTTTACAGATTCCCCAGACAGGGTCTCTTTTAAACAACGAGCTAGTTTGGAAGCACAATAGAAAAGGGATCTTCACAGTCAGGAGTGCGTACAGGTTAGGCCTCAGTCATGGTTGTCCTCAGGAAACTTCAAGTTCTAATAACGAGAAAGTGAAGGAATTCTGGAAGAAATTATAG

mRNA sequence

ATGGCGGACACACGAAGAACGTTAGAAAACGAACTGTTGTATTACGACAGAGAAATCCTTCTCTTAGACGAGCCCAAGGGATCACGACATTTCGCAGACCATGAATTTCGGTACGCTTCTTTTTGGATTCATATCCACAATCTACCCTCCGCAGATGCGGAAGAATCGTTAATACATAACGTGAATGCCCTTTCAAAGTCGATATTGAGCCAGAGGGGAAACAATTCGAACCTAATCTCTGACATCCCATTTCACACGAGGCATCTCTGGCCAGTTTTTGTTCGAGGAGCATGGACTCCAGAGGACGAGGGAGATCCAACCGAGGGTGAAACGAGGGCGAGCGGAGGTGGCTCATCGGCGACACAACAAAAGAAGCAGGAAGCTACCGACGACAATGGCTCAAGAAAGATTTTCGATGAATTTAAAATTATCCTAAATGCTATTAACTTTTCAGCTACAACGAATCCAAAGGAGGAACTTGCGGCGGGATCCATGGAACATTCAAAAGCGCCCCGAAAGGTAAAGAAAGTTGTCGTTACGGAAGTCACCAAGGCGTTAGGGTTTGAGGAATCAGTTTCGGATGGAAAAAGTGAAGATGAAGGGAAACAACGATTTTCGAAGGAGACGGTTGTGGGACCCACAATAATTAATCGACCACGAGCAAAGATGGATAAGTTGGCAAGAAAATTGAATCCAAGCGGTGAAGGAAATGGGTCGAATGACTTATTGGGCCTAATTTTTAATGTGGGTTGTGACTCGTCTAAGATTAAGTTGGACCACAATGTCGGGCCTCGTGGTTCGGCGAGCTGTAATCCGAAGAAGAAACTAGAGATGGGTGTCGTGGGCCTCAAAAAGTCCAACAAGGTTTCAGGCCAGAAGAGAATCCAAGGAAAACTATCAGAAGAAGGACCATCTAGCACAGTGCTCAGTAGAGTTGAAAAGGTGGAACCACCGTCGCATGGGTGGCTCGATTCGGGCTCTAACCCGCTAGACCCCAAGGCAATAGAGGAAGTTATTCGAAGTATCCCTCAAACAATTTCGGAGGATACTAATAATTGGCCTTTAAAAGACTTCACAAGAATGGAGATTGAGGAGGTGATAAAGGGTTACAGATGGAAGATTGGAAATGGTTGCCAGGTAACTATCATGAATGACTCCTGGTTTATAAGTGATGATCGGGTGCATCCCAAGGAGGTTGCTCCTACCTTTGCCCAAGGCTCCGTCCAGTTTATTCTAAGGGAAGACGGTTCTTGGGATGTAGAGAAGATTAAGAGAAACTTCCACTTGGTGGATGTGCGCCATATTTTACAGATTCCCCAGACAGGGTCTCTTTTAAACAACGAGCTAGTTTGGAAGCACAATAGAAAAGGGATCTTCACAGTCAGGAGTGCGTACAGGTTAGGCCTCAGTCATGGTTGTCCTCAGGAAACTTCAAGTTCTAATAACGAGAAAGTGAAGGAATTCTGGAAGAAATTATAG

Coding sequence (CDS)

ATGGCGGACACACGAAGAACGTTAGAAAACGAACTGTTGTATTACGACAGAGAAATCCTTCTCTTAGACGAGCCCAAGGGATCACGACATTTCGCAGACCATGAATTTCGGTACGCTTCTTTTTGGATTCATATCCACAATCTACCCTCCGCAGATGCGGAAGAATCGTTAATACATAACGTGAATGCCCTTTCAAAGTCGATATTGAGCCAGAGGGGAAACAATTCGAACCTAATCTCTGACATCCCATTTCACACGAGGCATCTCTGGCCAGTTTTTGTTCGAGGAGCATGGACTCCAGAGGACGAGGGAGATCCAACCGAGGGTGAAACGAGGGCGAGCGGAGGTGGCTCATCGGCGACACAACAAAAGAAGCAGGAAGCTACCGACGACAATGGCTCAAGAAAGATTTTCGATGAATTTAAAATTATCCTAAATGCTATTAACTTTTCAGCTACAACGAATCCAAAGGAGGAACTTGCGGCGGGATCCATGGAACATTCAAAAGCGCCCCGAAAGGTAAAGAAAGTTGTCGTTACGGAAGTCACCAAGGCGTTAGGGTTTGAGGAATCAGTTTCGGATGGAAAAAGTGAAGATGAAGGGAAACAACGATTTTCGAAGGAGACGGTTGTGGGACCCACAATAATTAATCGACCACGAGCAAAGATGGATAAGTTGGCAAGAAAATTGAATCCAAGCGGTGAAGGAAATGGGTCGAATGACTTATTGGGCCTAATTTTTAATGTGGGTTGTGACTCGTCTAAGATTAAGTTGGACCACAATGTCGGGCCTCGTGGTTCGGCGAGCTGTAATCCGAAGAAGAAACTAGAGATGGGTGTCGTGGGCCTCAAAAAGTCCAACAAGGTTTCAGGCCAGAAGAGAATCCAAGGAAAACTATCAGAAGAAGGACCATCTAGCACAGTGCTCAGTAGAGTTGAAAAGGTGGAACCACCGTCGCATGGGTGGCTCGATTCGGGCTCTAACCCGCTAGACCCCAAGGCAATAGAGGAAGTTATTCGAAGTATCCCTCAAACAATTTCGGAGGATACTAATAATTGGCCTTTAAAAGACTTCACAAGAATGGAGATTGAGGAGGTGATAAAGGGTTACAGATGGAAGATTGGAAATGGTTGCCAGGTAACTATCATGAATGACTCCTGGTTTATAAGTGATGATCGGGTGCATCCCAAGGAGGTTGCTCCTACCTTTGCCCAAGGCTCCGTCCAGTTTATTCTAAGGGAAGACGGTTCTTGGGATGTAGAGAAGATTAAGAGAAACTTCCACTTGGTGGATGTGCGCCATATTTTACAGATTCCCCAGACAGGGTCTCTTTTAAACAACGAGCTAGTTTGGAAGCACAATAGAAAAGGGATCTTCACAGTCAGGAGTGCGTACAGGTTAGGCCTCAGTCATGGTTGTCCTCAGGAAACTTCAAGTTCTAATAACGAGAAAGTGAAGGAATTCTGGAAGAAATTATAG

Protein sequence

MADTRRTLENELLYYDREILLLDEPKGSRHFADHEFRYASFWIHIHNLPSADAEESLIHNVNALSKSILSQRGNNSNLISDIPFHTRHLWPVFVRGAWTPEDEGDPTEGETRASGGGSSATQQKKQEATDDNGSRKIFDEFKIILNAINFSATTNPKEELAAGSMEHSKAPRKVKKVVVTEVTKALGFEESVSDGKSEDEGKQRFSKETVVGPTIINRPRAKMDKLARKLNPSGEGNGSNDLLGLIFNVGCDSSKIKLDHNVGPRGSASCNPKKKLEMGVVGLKKSNKVSGQKRIQGKLSEEGPSSTVLSRVEKVEPPSHGWLDSGSNPLDPKAIEEVIRSIPQTISEDTNNWPLKDFTRMEIEEVIKGYRWKIGNGCQVTIMNDSWFISDDRVHPKEVAPTFAQGSVQFILREDGSWDVEKIKRNFHLVDVRHILQIPQTGSLLNNELVWKHNRKGIFTVRSAYRLGLSHGCPQETSSSNNEKVKEFWKKL
Homology
[Close]
BLAST of Tan0004524 vs. NCBI nr
Match: ABA97040.1 (retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group])

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-13
Identity = 46/122 (37.70%), Postives = 64/122 (52.46%), Query Frame = 0 

Query: 368  KGYRWKIGNGCQVTIMNDSWFISDDRVHPKEVAPTFAQGSVQFILREDGSWDVEKIKRNF 427
            KG  W+IGNG  V I  D W   D    P           V  +L +DGSWDV+K+ R F
Sbjct: 1495 KGIVWRIGNGRSVRIWRDPWIPRDHSCRPITTKRNCRVKWVSDLLGQDGSWDVQKVSRVF 1554

Query: 428  HLVDVRHILQIPQTGSLLNNELVWKHNRKGIFTVRSAYRLGLSHGCPQETSSSNNEKVKE 487
              +D   IL+I  +  L  + L W  +R G F+VRSAY+L +S     E+SSS+ +  ++
Sbjct: 1555 LPIDADEILKIRTSVRLEEDFLSWHPDRLGQFSVRSAYKLAISLDYADESSSSSGQNPQK 1614

Query: 488  FW 490
             W
Sbjct: 1615 IW 1616

[Close]
BLAST of Tan0004524 vs. NCBI nr
Match: EEC81552.1 (hypothetical protein OsI_24974 [Oryza sativa Indica Group])

HSP 1 Score: 87.0 bits (214), Expect = 4.8e-13
Identity = 45/122 (36.89%), Postives = 63/122 (51.64%), Query Frame = 0 

Query: 368 KGYRWKIGNGCQVTIMNDSWFISDDRVHPKEVAPTFAQGSVQFILREDGSWDVEKIKRNF 427
           KG  W+IGNG  V I  D W   D    P           V  +L +DGSWDV+ + R F
Sbjct: 753 KGIVWRIGNGRSVRIWRDPWIPRDHSRRPITTKRNCRVKWVSDLLGQDGSWDVQNVSRVF 812

Query: 428 HLVDVRHILQIPQTGSLLNNELVWKHNRKGIFTVRSAYRLGLSHGCPQETSSSNNEKVKE 487
             +D   IL+I  +  L  + L W  +R G F+VRSAY+L +S     E+SSS+ +  ++
Sbjct: 813 LPIDADEILKIRTSVRLEEDFLAWHPDRLGQFSVRSAYKLAISLDYADESSSSSGQNPQK 872

Query: 488 FW 490
            W
Sbjct: 873 IW 874

[Close]
BLAST of Tan0004524 vs. NCBI nr
Match: XP_025877668.1 (uncharacterized protein LOC4351546 [Oryza sativa Japonica Group] >ABA96496.2 retrotransposon protein, putative, unclassified, expressed [Oryza sativa Japonica Group] >BAF29216.2 Os12g0156200 [Oryza sativa Japonica Group])

HSP 1 Score: 86.3 bits (212), Expect = 8.2e-13
Identity = 43/125 (34.40%), Postives = 63/125 (50.40%), Query Frame = 0 

Query: 368  KGYRWKIGNGCQVTIMNDSWFISDDRVHPKEVAPTFAQGSVQFILREDGSWDVEKIKRNF 427
            KG  W++GNG  + I  DSW   D    P           V  ++ EDGSWDV KI + F
Sbjct: 1051 KGIIWRVGNGNSIRIWRDSWLPRDHSRRPITGKANCRLKWVSDLITEDGSWDVPKIHQYF 1110

Query: 428  HLVDVRHILQIPQTGSLLNNELVWKHNRKGIFTVRSAYRLGLSHGCPQETSSSNNEKVKE 487
            H +D   IL I  +     + + W  ++ G+F+VRSAYRL       +E+SSS    + +
Sbjct: 1111 HNLDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINK 1170

Query: 488  FWKKL 493
             W+ +
Sbjct: 1171 AWEMI 1175

[Close]
BLAST of Tan0004524 vs. NCBI nr
Match: AAQ19327.1 (bZIP-like protein [Oryza sativa Japonica Group] >KAB8116658.1 hypothetical protein EE612_057881 [Oryza sativa])

HSP 1 Score: 86.3 bits (212), Expect = 8.2e-13
Identity = 43/125 (34.40%), Postives = 63/125 (50.40%), Query Frame = 0 

Query: 368  KGYRWKIGNGCQVTIMNDSWFISDDRVHPKEVAPTFAQGSVQFILREDGSWDVEKIKRNF 427
            KG  W++GNG  + I  DSW   D    P           V  ++ EDGSWDV KI + F
Sbjct: 1654 KGIIWRVGNGNSIRIWRDSWLPRDHSRRPITGKANCRLKWVSDLITEDGSWDVPKIHQYF 1713

Query: 428  HLVDVRHILQIPQTGSLLNNELVWKHNRKGIFTVRSAYRLGLSHGCPQETSSSNNEKVKE 487
            H +D   IL I  +     + + W  ++ G+F+VRSAYRL       +E+SSS    + +
Sbjct: 1714 HNLDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINK 1773

Query: 488  FWKKL 493
             W+ +
Sbjct: 1774 AWEMI 1778

[Close]
BLAST of Tan0004524 vs. NCBI nr
Match: EEC68887.1 (hypothetical protein OsI_37529 [Oryza sativa Indica Group])

HSP 1 Score: 86.3 bits (212), Expect = 8.2e-13
Identity = 43/125 (34.40%), Postives = 63/125 (50.40%), Query Frame = 0 

Query: 368  KGYRWKIGNGCQVTIMNDSWFISDDRVHPKEVAPTFAQGSVQFILREDGSWDVEKIKRNF 427
            KG  W++GNG  + I  DSW   D    P           V  ++ EDGSWDV KI + F
Sbjct: 1377 KGIIWRVGNGNSIRIWRDSWLPRDHSRRPITGKANCRLKWVSDLITEDGSWDVPKIHQYF 1436

Query: 428  HLVDVRHILQIPQTGSLLNNELVWKHNRKGIFTVRSAYRLGLSHGCPQETSSSNNEKVKE 487
            H +D   IL I  +     + + W  ++ G+F+VRSAYRL       +E+SSS    + +
Sbjct: 1437 HNLDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRLAAQLVNIEESSSSGTNNINK 1496

Query: 488  FWKKL 493
             W+ +
Sbjct: 1497 AWEMI 1501

[Close]
BLAST of Tan0004524 vs. ExPASy TrEMBL
Match: Q2QUC2 (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g16750 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.1e-14
Identity = 46/122 (37.70%), Postives = 64/122 (52.46%), Query Frame = 0 

Query: 368  KGYRWKIGNGCQVTIMNDSWFISDDRVHPKEVAPTFAQGSVQFILREDGSWDVEKIKRNF 427
            KG  W+IGNG  V I  D W   D    P           V  +L +DGSWDV+K+ R F
Sbjct: 1495 KGIVWRIGNGRSVRIWRDPWIPRDHSCRPITTKRNCRVKWVSDLLGQDGSWDVQKVSRVF 1554

Query: 428  HLVDVRHILQIPQTGSLLNNELVWKHNRKGIFTVRSAYRLGLSHGCPQETSSSNNEKVKE 487
              +D   IL+I  +  L  + L W  +R G F+VRSAY+L +S     E+SSS+ +  ++
Sbjct: 1555 LPIDADEILKIRTSVRLEEDFLSWHPDRLGQFSVRSAYKLAISLDYADESSSSSGQNPQK 1614

Query: 488  FW 490
             W
Sbjct: 1615 IW 1616

[Close]
BLAST of Tan0004524 vs. ExPASy TrEMBL
Match: A0A803PYN6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-13
Identity = 40/126 (31.75%), Postives = 67/126 (53.17%), Query Frame = 0 

Query: 368 KGYRWKIGNGCQVTIMNDSWFISDDRVHPKEVAPTFAQGSVQFILREDGSWDVEKIKRNF 427
           +G  WK+GNG  +  +ND W + +  +   ++       S+ + +   G+WD+ K++ +F
Sbjct: 592 RGLLWKVGNGQTINTINDRW-LPNFALKDSDLIAALPSPSLSYFISPSGAWDLNKLRCHF 651

Query: 428 HLVDVRHILQIPQTGSLLNNELVWKHNRKGIFTVRSAYRLGLSH-GCPQETSSSNNEKVK 487
            +  + HIL IP  G + ++ L+W  +  GIF V+S Y L +SH   P  +S   N   K
Sbjct: 652 PVFIIDHILDIPIAGHMCSDVLIWGKDNSGIFNVKSTYHLAISHRDIPSSSSPLGN---K 711

Query: 488 EFWKKL 493
            FW KL
Sbjct: 712 RFWSKL 713

[Close]
BLAST of Tan0004524 vs. ExPASy TrEMBL
Match: A0A803QJV0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-13
Identity = 41/129 (31.78%), Postives = 68/129 (52.71%), Query Frame = 0 

Query: 364  EEVIKGYRWKIGNGCQVTIMNDSWFISDDRVHPKEVAPTFAQGSVQFILREDGSWDVEKI 423
            E ++KGYRW++GNG QV ++ D W          +  P   Q  V  +    G WD   I
Sbjct: 1354 EIILKGYRWRVGNGQQVRVLEDPWLPRPTSFKVYDKPPFPQQLCVVDLTHPSGVWDESFI 1413

Query: 424  KRNFHLVDVRHILQIPQTGSLLNNELVWKHNRKGIFTVRSAYRLGLSHGCPQETSSSNNE 483
            + NF+  D   IL++P     L ++++W ++R G +TVRS YR+       +  ++S  +
Sbjct: 1414 RANFNHEDAEMILRLPPLHEGLEDKVMWHYSRNGEYTVRSGYRMAAE--MRKSEATSEGQ 1473

Query: 484  KVKEFWKKL 493
             +K++W KL
Sbjct: 1474 LMKDWWSKL 1480

[Close]
BLAST of Tan0004524 vs. ExPASy TrEMBL
Match: B8B7F1 (zf-RVT domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_24974 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.3e-13
Identity = 45/122 (36.89%), Postives = 63/122 (51.64%), Query Frame = 0 

Query: 368 KGYRWKIGNGCQVTIMNDSWFISDDRVHPKEVAPTFAQGSVQFILREDGSWDVEKIKRNF 427
           KG  W+IGNG  V I  D W   D    P           V  +L +DGSWDV+ + R F
Sbjct: 753 KGIVWRIGNGRSVRIWRDPWIPRDHSRRPITTKRNCRVKWVSDLLGQDGSWDVQNVSRVF 812

Query: 428 HLVDVRHILQIPQTGSLLNNELVWKHNRKGIFTVRSAYRLGLSHGCPQETSSSNNEKVKE 487
             +D   IL+I  +  L  + L W  +R G F+VRSAY+L +S     E+SSS+ +  ++
Sbjct: 813 LPIDADEILKIRTSVRLEEDFLAWHPDRLGQFSVRSAYKLAISLDYADESSSSSGQNPQK 872

Query: 488 FW 490
            W
Sbjct: 873 IW 874

[Close]
BLAST of Tan0004524 vs. ExPASy TrEMBL
Match: A0A803NHG3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.0e-13
Identity = 40/129 (31.01%), Postives = 68/129 (52.71%), Query Frame = 0 

Query: 364  EEVIKGYRWKIGNGCQVTIMNDSWFISDDRVHPKEVAPTFAQGSVQFILREDGSWDVEKI 423
            E ++KGYRW++GNG QV ++ D W          +  P   Q  V  +    G WD   I
Sbjct: 1354 EIILKGYRWRVGNGQQVRVLEDPWLPRPTSFKVYDKPPFPQQLCVVDLTHPSGVWDESFI 1413

Query: 424  KRNFHLVDVRHILQIPQTGSLLNNELVWKHNRKGIFTVRSAYRLGLSHGCPQETSSSNNE 483
            + NF+  D   IL++P     L ++++W ++R G +TVRS YR+       +  ++   +
Sbjct: 1414 RANFNREDAEMILRLPPLHEDLEDKVMWHYSRNGEYTVRSGYRMAAE--IRKSEATLEGQ 1473

Query: 484  KVKEFWKKL 493
             +K++W+KL
Sbjct: 1474 LMKDWWRKL 1480

[Close]
BLAST of Tan0004524 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 8.8e-05
Identity = 31/107 (28.97%), Postives = 49/107 (45.79%), Query Frame = 0 

Query: 368 KGYRWKIGNGCQVTIMNDSWFISDDRVHPKEVAPTFAQGSVQFILREDGS---WDVEKIK 427
           KG R  IG+G  + I  D+  +      P     T+ + ++  +    GS   WD  KI 
Sbjct: 36  KGTRHLIGDGQNIRIGLDN-IVDSHPPRPLNTEETYKEMTINNLFERKGSYYFWDDSKIS 95

Query: 428 RNFHLVDVRHILQIPQTGSLLNNELVWKHNRKGIFTVRSAYRLGLSH 472
           +     D   I +I    S   ++++W +N  G +TVRS Y L L+H
Sbjct: 96  QFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWL-LTH 140

The following BLAST results are available for this feature:
BLAST of Tan0004524 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0004524 vs. NCBI nr
Match NameE-valueIdentityDescription
ABA97040.11.3e-1337.70retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group][more]
EEC81552.14.8e-1336.89hypothetical protein OsI_24974 [Oryza sativa Indica Group][more]
XP_025877668.18.2e-1334.40uncharacterized protein LOC4351546 [Oryza sativa Japonica Group] >ABA96496.2 ret... [more]
AAQ19327.18.2e-1334.40bZIP-like protein [Oryza sativa Japonica Group] >KAB8116658.1 hypothetical prote... [more]
EEC68887.18.2e-1334.40hypothetical protein OsI_37529 [Oryza sativa Indica Group][more]
BLAST of Tan0004524 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Q2QUC26.1e-1437.70Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica ... [more]
A0A803PYN61.0e-1331.75Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QJV01.8e-1331.78Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
B8B7F12.3e-1336.89zf-RVT domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_2... [more]
A0A803NHG34.0e-1331.01Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
BLAST of Tan0004524 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G09510.18.8e-0528.97Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0004524.1Tan0004524.1mRNA