Tan0004260 (gene) Snake gourd v1

Overview


Name	Tan0004260
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	U11/U12 small nuclear ribonucleoprotein 59 kDa protein
Location	LG10: 1853236 .. 1858893 (+)
RNA-Seq Expression	Tan0004260
Synteny	Tan0004260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGAATCGAAATGACTTTTGGATAGAAATTGAAGACAAATTCACAGTTCATTTTTACGAGCTAAGGCTGAAGCTTCTCAAGTTGCTGAGAAAATTCGGAAGAGGTTCGGCTTGGCTTGCTTGATTGCTTCGCTTCACTTATCGTAATCTGGTTGACAGTTTTTTCTTAATTTTTTTTAGTTTTTTGATTGATCGTACAGAGACTATTGCAGTATTGCTTTCAGTAGCAATGAATTCTGTTCCGCATCAGTTTGCGGCTCAACCTCCGTTGTTTTCGATGCCGCCACCGAATCCCCCGCCATCTTGTTCATCTTTCTGGGATAACCTAAATGTGCGTGATCGTTTAAGGGATTTGCAAGACACTCTCGATCTTGCAAAGTCAATGTATGTGTTTGTTCGTAATTTGTCGCGTACTACTTCCCAGTTGTTTGTTTTCTTTTTCTGTTGTTGTGTTCCAGCTTTCAAATACTCTTGTTCTAAATTGTGATTTAAGTATATATATTGATAGGCAGAAAGAGCTTGAAATGTTGATGATAATTAAAGAACGCAAATCAACCGAGCAGAGTGTGGATAATGTGCCTAACGACACTTCTATCTGTGAGTTTTCTGAATGCTTGAAAGATAGAAGGGTTGATTTGGAGTTGCAAGAATCACGTTCGGTCGAAGCTGCAGCTGCTTTGATGAGAAGGTTAAGAGCTCAGCTTCATCCATTTAGGATGGTCGCTGATGAATCGAGTCTATGGGAAGAAAAACATCCTGCCGTTAGGTTATCTAATAAATTATCGAAGGCCAAGAGAAATAAGCAGTGGAGAAAGAGAAAGAGGAAACGCATTGCTGAATCACTTGCAAAGGTAGTATTTAGGTAATATATCTTAAATTAAAATTATCTTACATATTTACCATAATGTTACTTGTTTTTGCCTTTGTATTGTGACATCTTAGGAACGTGAAAGTTTTGACCAAGTTGATCGAGAGGCTGATGAATGGAGGGCCAGGGAGATCGCCAAGGATATTGCAAAACGCAAGGTGCTGGAATATTTACATGCATCAACTGGCATATTTTTATCTATTCTCTTACTGGAGTTAAGAATTTAATGTCTTTTTCTTTTTGGCTTCTTTTTTGGATTGGTGTAAAACAACATTCCTAAATCTCAAATGGATAAGTAGGTTCCATTGTAGTCTGATCTAGACATATGAAAACAGATGGGTTCATAGAAATATGAGAATTCAAACCTTTGGACGGTAGTTTAATAAGAAACAAGGTTTTTGAAGTTAAATGAAAGTACATACGATAGGGCCATTGGACGGTAGTTCTGTTACCAGATGGAAAAGTATTAAGTCTTTTTTCTTTCAAATTCAGAATGAGTAAGCACATTTGCAGTTATTCTTAATTTTTATGGACGGTCAGGGTTATGGACATACAAAATGGAGTTTATAGAAATATGAGAATTCAAACCTATAACTTTTCGGTAGAGACTATAATGTCTTAAGACTCTTAACTAGTTGAGTTGTGCTCATGTTGGATTGTTTTTTTACATATTGAAACTCTGCTTTTATATGTTGCCAGCGTGTTCATATAAATTCTATAGTTACTGTTAGACTATGTTGATATAGTTAAAGTTGCTCCAACCTATCAGCTTAAGCTTTTGGGTTGATTGGTAATTTAAGAGTTACCTCATCTCATAAACATTTATGTCGTTTGCTTCCCATACCATGTGCACTTCTTGAAACTGTTAGTATAATTAACAGCTATTTACATTTTTCACAGTTTTTTAATTGAAATCTTGAAGTTTTTTATTCATGTTCTGCACTTGATTACTATTGTGCATTTGCTTGTCTAGCTCTGGATTAGAGAACATTATCACAATGTATTAACAGAATAGTGTTAATTGTTGATGAGAATAAATTCATACAATGAAATTGGTGAATGGATTTCAGGTGGAGAAGATGAAAGAAATTGCAAGAATTAAAGCAAAAGAGGAGAAAAAGAAGCTAGATTCTGAGGTGAGAATCAACTGTAGTATTGGAACTATTCTTGCTGCCTTTTGTTCCCTCCTCTTATGAACTTCTAGCTAATGTTAGATATCATGTAGCTTGATCTAGCACTAATAGTGGAAAAGTTGCAAGAACTGCGCTCTATGAGGATCCAAAAATTGAAGAAACAAGGTTCGATTTCTTACTTCTTCTTCATCTGCTTTTTATAACTGCATTATTTACATGCAGATGGTTTGTTTTGCTGTTTTAGAAGATTTATTACATTCTTTTTGGTCTTTGGCAGTTGGGACTTTGTTAGGTGTATGAGTAGGATGGATAGAAGAACTAAATCTAAATCATTGTCAATTGTCTGTATCTTTATTTTCTTTTGTATAAATGGCAGTATGTCATCTAGCTAGCGAAATGTACTTAGGTTCTTGAATTGCTGAACTCACTATCAATTGCTCATGTGATTGTGATTTCATTGAAGATTGAATAAGTGAGAGAGAGAGAGTAAGGAAGCTGAAGGCAAGAAAGAGGGTGCACTATCCTTCTAGGATTGTCAAAGTTGAAACTAAATCATTTAGAATCTTCTTTGATGAAAGAATTAAGGGGGAGAGTGAAAATTGAGGAAAGAGAGATTTTTAGCTTTTATTCCTATCCAATTGGCTATACAACATGTTGGACAGGATAGGGAAGATCCTACATAGTCTCTAGAGTAATCCTACCAATAACATATTTTCCAAGCAAACGAGAATGGTTATTTTACTATTTGGATGAAGAAAACCATCAATTAGAAGTGTGCTAGAGATTTGTAAGATCGATCCAGTTAAAGGTAAATCTTGTGTTTTTGTTCCTAAAGAGGAGGTAACATGAGTTGGCTTGACTTTATGCTTTTTGTCAAATATTTCCCTAGAAGACCTTTCCAAACTAAGAAACAAAAAGAAAGAGTGTTTTTTTAGTTCAACAAATGTGAGGTTGGGTCTTCAAATGTTCAACCTAAGATATTGATGCCTTAAATCTGGAGCTATGCTCATGTTAGGCAAGATACGATGCTTTTTGATAGTGTTGGCGAAAAACACTTGAAGGATAAGGTGAAGGGCTTGGAAGGCTTGGGGATGGGAGACTGAAAAGTTGTGGAGGAGACTGTCAAGTGAAAGGAAAATGTAAAGAAGTCACCTATCATTGAGTGGAAAAGCACAGTTGTGATTACTTTCCACACAACGATTAGCTGGTCATTTTAGAAGCCTCTAGGAAAATTATTGAATTCACATGCTCCTCAATCCATTCCACCCTAAAAAAGCTGTGCTTAGACACTTAGATGAAGAAAAGGCTTAGGCCTTTGCAAATATTTTGGGTGGGTTATTGAGTTTGAGAAGTGGAATGCTGGATAACATGGTAACCTTGTAGGGAGGGTGATCAATCTGAGACGTCTACCAGTGTCATTTTGGACCCATGAAACGCTGGAGAAACTTGGGAACATTTATAGAAGATTCCTACTATCTGCTACGAAAACAAATAATTTACTGGACACATGTATAGAAATTAGAGCAATATATTGTGGTTTTATTCCAGCTGAGGTGGTTATTGAAGATTTAAAAAATGGGTAAAAAGTGAGATTCTCTTTGGTATAGGAATAATGTTGTAAATGGGAAGTTACAGGGTTGAAAGGGTATGTTTGGTTTTCTTGGACTGTATTTATTGAGTACCGTGGGATTTTGAGAGTTCCTTGGAACTATTTTCTTTCGAATTTTTCACTGTGTCAATGAAACTATTTGTTTATTTAAAAGAGAAAAAAATGATTGCTAGTGAGTTTTCATTACTTTCTGTATCATAAAATTTCCTACTTGGATCTATAGCCTAATGATAGTAGTGGTCGGTGGTATATTTGTCCAGGTCATTTTCTACCTGAGGAGGATGATAAGTTTCTAGAGAAGGTTCGAGCTGCAGTTGAGGAAGAGGAACGTCAAGCCCTTGCTGCAGCTGATACAGATGCTGCCAAGGATGCCATTGCAACTGCAGTGGTGTCTAGGAAGACTATTCCGAGTTATGATCCCGAATCAATGGATCCAAATAGTAATACAGAAAAGTGTGAAGAAAGAAATGATCAAAGAATTGCAAGTGCAGAAGATATGGTCTCTAGTATCAGCGCTAATAAGGAACCAGGGAAGCAGTTTGGAGAAGGACCAGGTTATGGAAGAGTTTATGATTATGCGGCCAATTTACCGATGGAATTCTATCATTATTATTATGGAAGTAATACTGATATGGGTACATTAATTGAGGTAATTTCAGTAATTATTTTTGTGCTCTTCACGATTTGGAAAACCTATATCTGTATTGTGGAAAGGAGTGGGTTGTAGATTATGAGTTGCAGTAGCATGTAATTTGTAGGTTTTGTATTTCTATAAGATAGTAAGTGGCCTAGTGTAACTTTATTGTTTGAATTCGTGGGATTAGCAAATTAGTAGTCTGCGATGAGCAAATTAACATAATATACATCAGCTCGGAGCTAAATCATGAGTCCAAAACTTGTAGCAAAGTGCCCCCTTGGTTTGTTCTATAGAATCTCTGCTAACATTGTAAAAAAATTACAGTGTGATAATTGTCTTGTATTAGTTCAAAATGTTTTTAGGATATTGGAAAACAATCCCTTATGCCGGTCTGTTAATTGACCTTAATACAACCATTACATAGCATCTTTGATTTTAAATCACAACTATTACCGCTTTATGTGCAGGTAAGAAGATCATGGGATGTATATATAAGACCTGGAGGAAGGTAAGATCCAATTCTTTTCTCTAGTTATTCATCTTCTCAAGTATTGGCCAAGTTTCCATAGAAAAACCAGGAAGTAACTATCACCTCGCTCATAATATTTGAACTTCCATGAGTACATCACAAATCTACAACAAACACCACTATCACTAGCAATTTACGAGTAGGGCTACAATAGCATCGAGTGTGCTCGTATCAGTAAACCATAGGACATCTCTGCAGTTTCTTCTAGTTTTTGCCTATAATTGTATATATATATTCTACTGTATCCATAGCCTCAATTGCATTCCCCTACGGGATTTCGTGCAGCCGAATACCAGGACATTGGGTTCAACCACCACCACCGTCAGATGAAATTTGGGCAGCTTATTTGGTGCGACCAAAATGAAACCAGTCAAGCCATACAAGAAGAATTGGTTTTCCAAAATGTGCTAGTACAGATTGGTATCAGTGGCAAATAGATCGATGGCGAGCTTAACATCGTTCAGACATCGGTATGTAGTTGTATGATCCTTGAGCAGTTTAAATATTTTGAAGTTGTTTGGTAAGAAGATAATCAATAAATTTCCTATTTGTTGTTTAAAATGCCGTAAAAGTCCAGCTGAGTTCATCATGTTGAGTAACGGATCGTGACAAGTTTGTGAAGATGTCTGAGAGATTTAAGAAAGCTCTAAATCCAGGCAGGAGCAGAATTCCAAATGGATTGGTAACTTGATTCTTGATTTGGCTTATTTGAGCTGGAGAAGCTTTCGTGATTATTTATTTTTGGCTTCTAGTTTTTTAGAAATGTACTTATGTAAATAGAAAATTTGGATACTGCATCTATATGGACTATGGGTTTCAAGAAGCCAATTCAATTTATTGGCTTTTGTTCTCTCTTTTAAAGAAGGCATTTCATAATTTATT

mRNA sequence

GGGGAATCGAAATGACTTTTGGATAGAAATTGAAGACAAATTCACAGTTCATTTTTACGAGCTAAGGCTGAAGCTTCTCAAGTTGCTGAGAAAATTCGGAAGAGAGACTATTGCAGTATTGCTTTCAGTAGCAATGAATTCTGTTCCGCATCAGTTTGCGGCTCAACCTCCGTTGTTTTCGATGCCGCCACCGAATCCCCCGCCATCTTGTTCATCTTTCTGGGATAACCTAAATGTGCGTGATCGTTTAAGGGATTTGCAAGACACTCTCGATCTTGCAAAGTCAATGCAGAAAGAGCTTGAAATGTTGATGATAATTAAAGAACGCAAATCAACCGAGCAGAGTGTGGATAATGTGCCTAACGACACTTCTATCTGTGAGTTTTCTGAATGCTTGAAAGATAGAAGGGTTGATTTGGAGTTGCAAGAATCACGTTCGGTCGAAGCTGCAGCTGCTTTGATGAGAAGGTTAAGAGCTCAGCTTCATCCATTTAGGATGGTCGCTGATGAATCGAGTCTATGGGAAGAAAAACATCCTGCCGTTAGGTTATCTAATAAATTATCGAAGGCCAAGAGAAATAAGCAGTGGAGAAAGAGAAAGAGGAAACGCATTGCTGAATCACTTGCAAAGGAACGTGAAAGTTTTGACCAAGTTGATCGAGAGGCTGATGAATGGAGGGCCAGGGAGATCGCCAAGGATATTGCAAAACGCAAGGTGGAGAAGATGAAAGAAATTGCAAGAATTAAAGCAAAAGAGGAGAAAAAGAAGCTAGATTCTGAGCTTGATCTAGCACTAATAGTGGAAAAGTTGCAAGAACTGCGCTCTATGAGGATCCAAAAATTGAAGAAACAAGGTCATTTTCTACCTGAGGAGGATGATAAGTTTCTAGAGAAGGTTCGAGCTGCAGTTGAGGAAGAGGAACGTCAAGCCCTTGCTGCAGCTGATACAGATGCTGCCAAGGATGCCATTGCAACTGCAGTGGTGTCTAGGAAGACTATTCCGAGTTATGATCCCGAATCAATGGATCCAAATAGTAATACAGAAAAGTGTGAAGAAAGAAATGATCAAAGAATTGCAAGTGCAGAAGATATGGTCTCTAGTATCAGCGCTAATAAGGAACCAGGGAAGCAGTTTGGAGAAGGACCAGGTTATGGAAGAGTTTATGATTATGCGGCCAATTTACCGATGGAATTCTATCATTATTATTATGGAAGTAATACTGATATGGGTACATTAATTGAGGTAAGAAGATCATGGGATGTATATATAAGACCTGGAGGAAGCCGAATACCAGGACATTGGGTTCAACCACCACCACCGTCAGATGAAATTTGGGCAGCTTATTTGGTGCGACCAAAATGAAACCAGTCAAGCCATACAAGAAGAATTGGTTTTCCAAAATGTGCTAGTACAGATTGGTATCAGTGGCAAATAGATCGATGGCGAGCTTAACATCGTTCAGACATCGCTGAGTTCATCATGTTGAGTAACGGATCGTGACAAGTTTGTGAAGATGTCTGAGAGATTTAAGAAAGCTCTAAATCCAGGCAGGAGCAGAATTCCAAATGGATTGGTAACTTGATTCTTGATTTGGCTTATTTGAGCTGGAGAAGCTTTCGTGATTATTTATTTTTGGCTTCTAGTTTTTTAGAAATGTACTTATGTAAATAGAAAATTTGGATACTGCATCTATATGGACTATGGGTTTCAAGAAGCCAATTCAATTTATTGGCTTTTGTTCTCTCTTTTAAAGAAGGCATTTCATAATTTATT

Coding sequence (CDS)

ATGAATTCTGTTCCGCATCAGTTTGCGGCTCAACCTCCGTTGTTTTCGATGCCGCCACCGAATCCCCCGCCATCTTGTTCATCTTTCTGGGATAACCTAAATGTGCGTGATCGTTTAAGGGATTTGCAAGACACTCTCGATCTTGCAAAGTCAATGCAGAAAGAGCTTGAAATGTTGATGATAATTAAAGAACGCAAATCAACCGAGCAGAGTGTGGATAATGTGCCTAACGACACTTCTATCTGTGAGTTTTCTGAATGCTTGAAAGATAGAAGGGTTGATTTGGAGTTGCAAGAATCACGTTCGGTCGAAGCTGCAGCTGCTTTGATGAGAAGGTTAAGAGCTCAGCTTCATCCATTTAGGATGGTCGCTGATGAATCGAGTCTATGGGAAGAAAAACATCCTGCCGTTAGGTTATCTAATAAATTATCGAAGGCCAAGAGAAATAAGCAGTGGAGAAAGAGAAAGAGGAAACGCATTGCTGAATCACTTGCAAAGGAACGTGAAAGTTTTGACCAAGTTGATCGAGAGGCTGATGAATGGAGGGCCAGGGAGATCGCCAAGGATATTGCAAAACGCAAGGTGGAGAAGATGAAAGAAATTGCAAGAATTAAAGCAAAAGAGGAGAAAAAGAAGCTAGATTCTGAGCTTGATCTAGCACTAATAGTGGAAAAGTTGCAAGAACTGCGCTCTATGAGGATCCAAAAATTGAAGAAACAAGGTCATTTTCTACCTGAGGAGGATGATAAGTTTCTAGAGAAGGTTCGAGCTGCAGTTGAGGAAGAGGAACGTCAAGCCCTTGCTGCAGCTGATACAGATGCTGCCAAGGATGCCATTGCAACTGCAGTGGTGTCTAGGAAGACTATTCCGAGTTATGATCCCGAATCAATGGATCCAAATAGTAATACAGAAAAGTGTGAAGAAAGAAATGATCAAAGAATTGCAAGTGCAGAAGATATGGTCTCTAGTATCAGCGCTAATAAGGAACCAGGGAAGCAGTTTGGAGAAGGACCAGGTTATGGAAGAGTTTATGATTATGCGGCCAATTTACCGATGGAATTCTATCATTATTATTATGGAAGTAATACTGATATGGGTACATTAATTGAGGTAAGAAGATCATGGGATGTATATATAAGACCTGGAGGAAGCCGAATACCAGGACATTGGGTTCAACCACCACCACCGTCAGATGAAATTTGGGCAGCTTATTTGGTGCGACCAAAATGA

Protein sequence

MNSVPHQFAAQPPLFSMPPPNPPPSCSSFWDNLNVRDRLRDLQDTLDLAKSMQKELEMLMIIKERKSTEQSVDNVPNDTSICEFSECLKDRRVDLELQESRSVEAAAALMRRLRAQLHPFRMVADESSLWEEKHPAVRLSNKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELDLALIVEKLQELRSMRIQKLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAVVSRKTIPSYDPESMDPNSNTEKCEERNDQRIASAEDMVSSISANKEPGKQFGEGPGYGRVYDYAANLPMEFYHYYYGSNTDMGTLIEVRRSWDVYIRPGGSRIPGHWVQPPPPSDEIWAAYLVRPK

Homology

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BLAST of Tan0004260 vs. ExPASy Swiss-Prot
Match: Q8VYD3 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP59 PE=2 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 3.9e-96
Identity = 215/409 (52.57%), Postives = 266/409 (65.04%), Query Frame = 0


Query: 5   PHQFAAQPPLFSMPP--PNPPPSCSSFWDNLNVRDRLRDLQDTLDLAKSMQKELEMLMII 64
           P  F    P F   P  P  PP C  FW+  N+ D+L+ LQDTL+LAKSM+KELE L +I
Sbjct: 3   PANFQPPNPPFHWAPMLPPDPPRCGMFWNTKNITDQLKQLQDTLNLAKSMEKELEALKMI 62

Query: 65  KERKSTEQSVDNVPNDTSICEFSECLKDRRVDLELQESRSVEAAAALMRRLRAQLHPFRM 124
           K+ K    SV+N   D+ +    E L+ R++DL  QE  SV+AA +LM  LRAQL PFR 
Sbjct: 63  KDAKG---SVENAVQDSGV----EYLEARKMDLGQQEMLSVDAANSLMSTLRAQLEPFRF 122

Query: 125 VADESSLWEEKHPAVRLSNKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADEWR 184
           V DE+S WEEK  AVRL+ K+ K+ RNK W+KRKR+  AE  AKE E F+Q DREADEWR
Sbjct: 123 VVDENSPWEEKSAAVRLTCKMKKSIRNKLWKKRKRRCAAEMRAKEPERFEQADREADEWR 182

Query: 185 AREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELDLALIVEKLQELRSMRIQKLKKQGH 244
            +E+AKD+A RKV++MK I +IKAK E+K+L+ EL+LALIVE++QELRS+RI+KLKKQGH
Sbjct: 183 EKEMAKDMANRKVDEMKAIEKIKAKRERKRLEPELELALIVEEMQELRSLRIEKLKKQGH 242

Query: 245 FLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIA-----TAVVSRKTIPSYDPESM 304
           FLPEEDDKF E VRAAVE+EE QA +  +T+  +  IA     T   S KT    D +S 
Sbjct: 243 FLPEEDDKFFESVRAAVEQEENQAQSLINTETEEHVIASEENTTLTTSNKTNNDTDKDS- 302

Query: 305 DPNSNTEKCEERNDQRIASAEDMVSSISANKEPGKQFGEGPGYGRVYDYAANLPMEFYHY 364
             N+N   CE     R   A D                         D  +NLP+E YHY
Sbjct: 303 --NTNAASCE-----RTMKAPD----------------------NGCDNISNLPVEVYHY 362

Query: 365 YYGSNTDMGTLIEVRRSWDVYIRPGGSRIPGHWVQPPPPSDEIWAAYLV 407
           YYGSN DMG LIE+RR WD Y+  GGSRIPGHWVQP PP++EIWA+ LV
Sbjct: 363 YYGSNIDMGRLIEIRREWDAYLSAGGSRIPGHWVQPSPPANEIWASCLV 374

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BLAST of Tan0004260 vs. NCBI nr
Match: XP_022924846.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucurbita moschata])

HSP 1 Score: 661.8 bits (1706), Expect = 3.9e-186
Identity = 354/409 (86.55%), Postives = 375/409 (91.69%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPLFSMPPPNPPPSCSSFWDNLNVRDRLRDLQDTLDLAKSMQKELEMLM 60
           MN VPHQFAAQPP F MPPPN PPSCSSFWDNLNVRDRLRDLQD+LDLAKSMQKELEML 
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEMLT 60

Query: 61  IIKERKSTEQSVDNVPNDTSICEFSECLKDRRVDLELQESRSVEAAAALMRRLRAQLHPF 120
           IIKE KS+EQS DN+P D+SI EFS+ L+D+R+ LELQESRSVE AAALM+RLR QLHPF
Sbjct: 61  IIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPF 120

Query: 121 RMVADESSLWEEKHPAVRLSNKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180
           R+  DESSL E    AV+LS KLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE
Sbjct: 121 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180

Query: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELDLALIVEKLQELRSMRIQKLKKQ 240
           WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSEL+LALIVEKLQELRS+RIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAVVSRKTIPSYDPESMDPN 300
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATA VSRKTIPSY+ ES DP+
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNLESRDPD 300

Query: 301 SNTEKCEERNDQRIASAEDMVSSISANKEPGKQFGEGPGYGRVYDYAANLPMEFYHYYYG 360
           S TE+ EERNDQR AS +D VS+IS NKEPGKQFGE  G+GR YDYAANLPMEFYHYYYG
Sbjct: 301 SATERSEERNDQRTASVDDKVSNISTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 360

Query: 361 SNTDMGTLIEVRRSWDVYIRPGGSRIPGHWVQPPPPSDEIWAAYLVRPK 410
           SNTDMGTLIEVRRSWD +IRPGGSRIPGHWVQPPPP+DEIWAAYLVRPK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 405

[Close]

BLAST of Tan0004260 vs. NCBI nr
Match: KAG7019034.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 661.4 bits (1705), Expect = 5.1e-186
Identity = 353/409 (86.31%), Postives = 374/409 (91.44%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPLFSMPPPNPPPSCSSFWDNLNVRDRLRDLQDTLDLAKSMQKELEMLM 60
           MN VPHQFAAQPP F MPPPN PP CSSFWDNLNVRDRLRDLQD+LDLAKSMQKELEML 
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPFCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEMLT 60

Query: 61  IIKERKSTEQSVDNVPNDTSICEFSECLKDRRVDLELQESRSVEAAAALMRRLRAQLHPF 120
           IIKE KS+EQS DN+P D+SI EFS+ L+D+R+ LELQESRSVE AAALM+RLR QLHPF
Sbjct: 61  IIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPF 120

Query: 121 RMVADESSLWEEKHPAVRLSNKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180
           R+  DESSL E    AV+LS KLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE
Sbjct: 121 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180

Query: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELDLALIVEKLQELRSMRIQKLKKQ 240
           WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSEL+LALIVEKLQELRS+RIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAVVSRKTIPSYDPESMDPN 300
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATA VSRKTIPSY+PES DP+
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNPESRDPD 300

Query: 301 SNTEKCEERNDQRIASAEDMVSSISANKEPGKQFGEGPGYGRVYDYAANLPMEFYHYYYG 360
           S TE+ EERNDQR AS +D VS+ S NKEPGKQFGE  G+GR YDYAANLPMEFYHYYYG
Sbjct: 301 SATERSEERNDQRAASVDDKVSNTSTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 360

Query: 361 SNTDMGTLIEVRRSWDVYIRPGGSRIPGHWVQPPPPSDEIWAAYLVRPK 410
           SNTDMGTLIEVRRSWD +IRPGGSRIPGHWVQPPPP+DEIWAAYLVRPK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 405

[Close]

BLAST of Tan0004260 vs. NCBI nr
Match: KAG6582639.1 (Protein ABIL1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 660.6 bits (1703), Expect = 8.7e-186
Identity = 353/409 (86.31%), Postives = 374/409 (91.44%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPLFSMPPPNPPPSCSSFWDNLNVRDRLRDLQDTLDLAKSMQKELEMLM 60
           MN VPHQFAAQPP F MPPPN P SCSSFWDNLNVRDRLRDLQD+LDLAKSMQKELEML 
Sbjct: 306 MNPVPHQFAAQPPRFLMPPPNQPASCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEMLT 365

Query: 61  IIKERKSTEQSVDNVPNDTSICEFSECLKDRRVDLELQESRSVEAAAALMRRLRAQLHPF 120
           IIKE KS+EQS DN+P D+SI EFS+ L+D+R+ LELQESRSVE AAALM+RLR QLHPF
Sbjct: 366 IIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPF 425

Query: 121 RMVADESSLWEEKHPAVRLSNKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180
           R+  DESSL E    AV+LS KLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE
Sbjct: 426 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 485

Query: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELDLALIVEKLQELRSMRIQKLKKQ 240
           WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSEL+LALIVEKLQELRS+RIQKLKKQ
Sbjct: 486 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 545

Query: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAVVSRKTIPSYDPESMDPN 300
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATA VSRKTIPSY+PES DP+
Sbjct: 546 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNPESRDPD 605

Query: 301 SNTEKCEERNDQRIASAEDMVSSISANKEPGKQFGEGPGYGRVYDYAANLPMEFYHYYYG 360
           S TE+ EERNDQR AS +D VS+ S NKEPGKQFGE  G+GR YDYAANLPMEFYHYYYG
Sbjct: 606 SATERSEERNDQRAASVDDKVSNTSTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 665

Query: 361 SNTDMGTLIEVRRSWDVYIRPGGSRIPGHWVQPPPPSDEIWAAYLVRPK 410
           SNTDMGTLIEVRRSWD +IRPGGSRIPGHWVQPPPP+DEIWAAYLVRPK
Sbjct: 666 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 710

[Close]

BLAST of Tan0004260 vs. NCBI nr
Match: XP_023526863.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 659.8 bits (1701), Expect = 1.5e-185
Identity = 352/409 (86.06%), Postives = 374/409 (91.44%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPLFSMPPPNPPPSCSSFWDNLNVRDRLRDLQDTLDLAKSMQKELEMLM 60
           MN VPHQFAAQPP F MPPPN PPSCSSFWDNLNVRDRLRDLQD+LDLAKSMQKELE+L 
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEVLT 60

Query: 61  IIKERKSTEQSVDNVPNDTSICEFSECLKDRRVDLELQESRSVEAAAALMRRLRAQLHPF 120
           IIKE KS+EQS DN+P D+SI EFS+ L+D+R+ LELQESRSVE AAALM+RLR QLHP 
Sbjct: 61  IIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPL 120

Query: 121 RMVADESSLWEEKHPAVRLSNKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180
           R+  DESSL E    AV+LS KLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE
Sbjct: 121 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180

Query: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELDLALIVEKLQELRSMRIQKLKKQ 240
           WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSEL+LALIVEKLQELRS+RIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAVVSRKTIPSYDPESMDPN 300
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATA VSRKTIPSY+PES DP+
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNPESRDPD 300

Query: 301 SNTEKCEERNDQRIASAEDMVSSISANKEPGKQFGEGPGYGRVYDYAANLPMEFYHYYYG 360
           S TE+ EERNDQR AS +D VS+ S NKEPGKQFGE  G+GR YDYAANLPMEFYHYYYG
Sbjct: 301 SATERSEERNDQRAASVDDKVSNTSTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 360

Query: 361 SNTDMGTLIEVRRSWDVYIRPGGSRIPGHWVQPPPPSDEIWAAYLVRPK 410
           SNTDMGTLIEVRRSWD +IRPGGSRIPGHWVQPPPP+DEIWAAYLVRPK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 405

[Close]

BLAST of Tan0004260 vs. NCBI nr
Match: XP_022147279.1 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Momordica charantia] >XP_022147280.1 U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Momordica charantia])

HSP 1 Score: 658.3 bits (1697), Expect = 4.3e-185
Identity = 351/409 (85.82%), Postives = 376/409 (91.93%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPLFSMPPPNPPPSCSSFWDNLNVRDRLRDLQDTLDLAKSMQKELEMLM 60
           MNSVPHQFAAQPP FSM    PPPSC+SFW+NLNVRDRLRDLQ+TLDLAKSMQKELEMLM
Sbjct: 1   MNSVPHQFAAQPPWFSM----PPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLM 60

Query: 61  IIKERKSTEQSVDNVPNDTSICEFSECLKDRRVDLELQESRSVEAAAALMRRLRAQLHPF 120
           I K+ KS+EQS  +VPND+   EFSE L+DRR++LELQESRSVEA  ALMR+LRAQLHPF
Sbjct: 61  IFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPF 120

Query: 121 RMVADESSLWEEKHPAVRLSNKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180
           RMV DESS W+EK+ AVRLS KL KAKRNK WRKRKRKRIAESLAKER SFD VDREADE
Sbjct: 121 RMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADE 180

Query: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELDLALIVEKLQELRSMRIQKLKKQ 240
           WRAREIAKDIAKRKVEKMKEIAR+KAKEEKK++DSEL+LALIVEKLQELRS+RIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAVVSRKTIPSYDPESMDPN 300
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATA VSRKTIPSY+PES DPN
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN 300

Query: 301 SNTEKCEERNDQRIASAEDMVSSISANKEPGKQFGEGPGYGRVYDYAANLPMEFYHYYYG 360
           SN E+ EERNDQR ASA+D VS+IS +KEPGKQFGEG G GRVYDYAANLPMEFYHYYYG
Sbjct: 301 SNAERLEERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYG 360

Query: 361 SNTDMGTLIEVRRSWDVYIRPGGSRIPGHWVQPPPPSDEIWAAYLVRPK 410
           SNTDMGTLIEVRRSWD YIRPGGSRIPGHWVQPPPP+DEIWAAYLVRPK
Sbjct: 361 SNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 402

[Close]

BLAST of Tan0004260 vs. ExPASy TrEMBL
Match: A0A6J1EAK8 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432209 PE=4 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 1.9e-186
Identity = 354/409 (86.55%), Postives = 375/409 (91.69%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPLFSMPPPNPPPSCSSFWDNLNVRDRLRDLQDTLDLAKSMQKELEMLM 60
           MN VPHQFAAQPP F MPPPN PPSCSSFWDNLNVRDRLRDLQD+LDLAKSMQKELEML 
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEMLT 60

Query: 61  IIKERKSTEQSVDNVPNDTSICEFSECLKDRRVDLELQESRSVEAAAALMRRLRAQLHPF 120
           IIKE KS+EQS DN+P D+SI EFS+ L+D+R+ LELQESRSVE AAALM+RLR QLHPF
Sbjct: 61  IIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPF 120

Query: 121 RMVADESSLWEEKHPAVRLSNKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180
           R+  DESSL E    AV+LS KLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE
Sbjct: 121 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180

Query: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELDLALIVEKLQELRSMRIQKLKKQ 240
           WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSEL+LALIVEKLQELRS+RIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAVVSRKTIPSYDPESMDPN 300
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATA VSRKTIPSY+ ES DP+
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNLESRDPD 300

Query: 301 SNTEKCEERNDQRIASAEDMVSSISANKEPGKQFGEGPGYGRVYDYAANLPMEFYHYYYG 360
           S TE+ EERNDQR AS +D VS+IS NKEPGKQFGE  G+GR YDYAANLPMEFYHYYYG
Sbjct: 301 SATERSEERNDQRTASVDDKVSNISTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 360

Query: 361 SNTDMGTLIEVRRSWDVYIRPGGSRIPGHWVQPPPPSDEIWAAYLVRPK 410
           SNTDMGTLIEVRRSWD +IRPGGSRIPGHWVQPPPP+DEIWAAYLVRPK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 405

[Close]

BLAST of Tan0004260 vs. ExPASy TrEMBL
Match: A0A6J1CZQ3 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Momordica charantia OX=3673 GN=LOC111016273 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 2.1e-185
Identity = 351/409 (85.82%), Postives = 376/409 (91.93%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPLFSMPPPNPPPSCSSFWDNLNVRDRLRDLQDTLDLAKSMQKELEMLM 60
           MNSVPHQFAAQPP FSM    PPPSC+SFW+NLNVRDRLRDLQ+TLDLAKSMQKELEMLM
Sbjct: 1   MNSVPHQFAAQPPWFSM----PPPSCASFWNNLNVRDRLRDLQETLDLAKSMQKELEMLM 60

Query: 61  IIKERKSTEQSVDNVPNDTSICEFSECLKDRRVDLELQESRSVEAAAALMRRLRAQLHPF 120
           I K+ KS+EQS  +VPND+   EFSE L+DRR++LELQESRSVEA  ALMR+LRAQLHPF
Sbjct: 61  IFKDGKSSEQSAVSVPNDS---EFSEYLEDRRINLELQESRSVEAVVALMRKLRAQLHPF 120

Query: 121 RMVADESSLWEEKHPAVRLSNKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180
           RMV DESS W+EK+ AVRLS KL KAKRNK WRKRKRKRIAESLAKER SFD VDREADE
Sbjct: 121 RMVYDESSPWQEKNAAVRLSTKLLKAKRNKLWRKRKRKRIAESLAKERGSFDLVDREADE 180

Query: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELDLALIVEKLQELRSMRIQKLKKQ 240
           WRAREIAKDIAKRKVEKMKEIAR+KAKEEKK++DSEL+LALIVEKLQELRS+RIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARVKAKEEKKRIDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAVVSRKTIPSYDPESMDPN 300
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAA+DAIATA VSRKTIPSY+PES DPN
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAARDAIATAEVSRKTIPSYNPESKDPN 300

Query: 301 SNTEKCEERNDQRIASAEDMVSSISANKEPGKQFGEGPGYGRVYDYAANLPMEFYHYYYG 360
           SN E+ EERNDQR ASA+D VS+IS +KEPGKQFGEG G GRVYDYAANLPMEFYHYYYG
Sbjct: 301 SNAERLEERNDQRTASADDKVSNISTDKEPGKQFGEGQGCGRVYDYAANLPMEFYHYYYG 360

Query: 361 SNTDMGTLIEVRRSWDVYIRPGGSRIPGHWVQPPPPSDEIWAAYLVRPK 410
           SNTDMGTLIEVRRSWD YIRPGGSRIPGHWVQPPPP+DEIWAAYLVRPK
Sbjct: 361 SNTDMGTLIEVRRSWDAYIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 402

[Close]

BLAST of Tan0004260 vs. ExPASy TrEMBL
Match: A0A6J1IWF2 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479855 PE=4 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 2.7e-185
Identity = 352/409 (86.06%), Postives = 373/409 (91.20%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPLFSMPPPNPPPSCSSFWDNLNVRDRLRDLQDTLDLAKSMQKELEMLM 60
           MN VPHQFAAQPP F MPPPN PPSCSSFWDNLNVRDRLRDLQD+LDLAKSMQKELEML 
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSMQKELEMLT 60

Query: 61  IIKERKSTEQSVDNVPNDTSICEFSECLKDRRVDLELQESRSVEAAAALMRRLRAQLHPF 120
           IIKE KS+EQS DN+P D+SI EFS+ L+D+R+ LELQESRSVE AAALM+RLR QLHPF
Sbjct: 61  IIKESKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLREQLHPF 120

Query: 121 RMVADESSLWEEKHPAVRLSNKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180
           R+  DESSL E    AV+LS KLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE
Sbjct: 121 RIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADE 180

Query: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELDLALIVEKLQELRSMRIQKLKKQ 240
           WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSEL+LALIVEKLQELRS+RIQKLKKQ
Sbjct: 181 WRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQKLKKQ 240

Query: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAVVSRKTIPSYDPESMDPN 300
           GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATA VSRKTI SY+PES DP+
Sbjct: 241 GHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTISSYNPESRDPD 300

Query: 301 SNTEKCEERNDQRIASAEDMVSSISANKEPGKQFGEGPGYGRVYDYAANLPMEFYHYYYG 360
           S TE+ EERNDQ  AS +D VS+ S NKEPGKQFGE  G+GR YDYAANLPMEFYHYYYG
Sbjct: 301 SATERPEERNDQTTASVDDKVSNTSTNKEPGKQFGEVQGFGRAYDYAANLPMEFYHYYYG 360

Query: 361 SNTDMGTLIEVRRSWDVYIRPGGSRIPGHWVQPPPPSDEIWAAYLVRPK 410
           SNTDMGTLIEVRRSWD +IRPGGSRIPGHWVQPPPP+DEIWAAYLVRPK
Sbjct: 361 SNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 405

[Close]

BLAST of Tan0004260 vs. ExPASy TrEMBL
Match: A0A6J1EAC6 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432209 PE=4 SV=1)

HSP 1 Score: 654.1 bits (1686), Expect = 4.0e-184
Identity = 353/414 (85.27%), Postives = 375/414 (90.58%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPLFSMPPPNPPPSCSSFWDNLNVRDRLRDLQDTLDLAKSM-----QKE 60
           MN VPHQFAAQPP F MPPPN PPSCSSFWDNLNVRDRLRDLQD+LDLAKS+     QKE
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSIINIDRQKE 60

Query: 61  LEMLMIIKERKSTEQSVDNVPNDTSICEFSECLKDRRVDLELQESRSVEAAAALMRRLRA 120
           LEML IIKE KS+EQS DN+P D+SI EFS+ L+D+R+ LELQESRSVE AAALM+RLR 
Sbjct: 61  LEMLTIIKEGKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLRE 120

Query: 121 QLHPFRMVADESSLWEEKHPAVRLSNKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD 180
           QLHPFR+  DESSL E    AV+LS KLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD
Sbjct: 121 QLHPFRIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD 180

Query: 181 READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELDLALIVEKLQELRSMRIQ 240
           READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSEL+LALIVEKLQELRS+RIQ
Sbjct: 181 READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQ 240

Query: 241 KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAVVSRKTIPSYDPE 300
           KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATA VSRKTIPSY+ E
Sbjct: 241 KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTIPSYNLE 300

Query: 301 SMDPNSNTEKCEERNDQRIASAEDMVSSISANKEPGKQFGEGPGYGRVYDYAANLPMEFY 360
           S DP+S TE+ EERNDQR AS +D VS+IS NKEPGKQFGE  G+GR YDYAANLPMEFY
Sbjct: 301 SRDPDSATERSEERNDQRTASVDDKVSNISTNKEPGKQFGEVQGFGRAYDYAANLPMEFY 360

Query: 361 HYYYGSNTDMGTLIEVRRSWDVYIRPGGSRIPGHWVQPPPPSDEIWAAYLVRPK 410
           HYYYGSNTDMGTLIEVRRSWD +IRPGGSRIPGHWVQPPPP+DEIWAAYLVRPK
Sbjct: 361 HYYYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 410

[Close]

BLAST of Tan0004260 vs. ExPASy TrEMBL
Match: A0A6J1IZE8 (U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479855 PE=4 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 5.7e-183
Identity = 351/414 (84.78%), Postives = 373/414 (90.10%), Query Frame = 0


Query: 1   MNSVPHQFAAQPPLFSMPPPNPPPSCSSFWDNLNVRDRLRDLQDTLDLAKSM-----QKE 60
           MN VPHQFAAQPP F MPPPN PPSCSSFWDNLNVRDRLRDLQD+LDLAKS+     QKE
Sbjct: 1   MNPVPHQFAAQPPRFLMPPPNQPPSCSSFWDNLNVRDRLRDLQDSLDLAKSIINIDRQKE 60

Query: 61  LEMLMIIKERKSTEQSVDNVPNDTSICEFSECLKDRRVDLELQESRSVEAAAALMRRLRA 120
           LEML IIKE KS+EQS DN+P D+SI EFS+ L+D+R+ LELQESRSVE AAALM+RLR 
Sbjct: 61  LEMLTIIKESKSSEQSADNLPYDSSIGEFSDYLEDKRISLELQESRSVEVAAALMKRLRE 120

Query: 121 QLHPFRMVADESSLWEEKHPAVRLSNKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD 180
           QLHPFR+  DESSL E    AV+LS KLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD
Sbjct: 121 QLHPFRIDTDESSLRE----AVKLSTKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVD 180

Query: 181 READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELDLALIVEKLQELRSMRIQ 240
           READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSEL+LALIVEKLQELRS+RIQ
Sbjct: 181 READEWRAREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELELALIVEKLQELRSIRIQ 240

Query: 241 KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAVVSRKTIPSYDPE 300
           KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATA VSRKTI SY+PE
Sbjct: 241 KLKKQGHFLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIATAEVSRKTISSYNPE 300

Query: 301 SMDPNSNTEKCEERNDQRIASAEDMVSSISANKEPGKQFGEGPGYGRVYDYAANLPMEFY 360
           S DP+S TE+ EERNDQ  AS +D VS+ S NKEPGKQFGE  G+GR YDYAANLPMEFY
Sbjct: 301 SRDPDSATERPEERNDQTTASVDDKVSNTSTNKEPGKQFGEVQGFGRAYDYAANLPMEFY 360

Query: 361 HYYYGSNTDMGTLIEVRRSWDVYIRPGGSRIPGHWVQPPPPSDEIWAAYLVRPK 410
           HYYYGSNTDMGTLIEVRRSWD +IRPGGSRIPGHWVQPPPP+DEIWAAYLVRPK
Sbjct: 361 HYYYGSNTDMGTLIEVRRSWDAFIRPGGSRIPGHWVQPPPPADEIWAAYLVRPK 410

[Close]

BLAST of Tan0004260 vs. TAIR 10
Match: AT2G46200.1 (unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 16; Bacteria - 188; Metazoa - 1070; Fungi - 227; Plants - 145; Viruses - 4; Other Eukaryotes - 1318 (source: NCBI BLink). )

HSP 1 Score: 353.2 bits (905), Expect = 2.8e-97
Identity = 215/409 (52.57%), Postives = 266/409 (65.04%), Query Frame = 0


Query: 5   PHQFAAQPPLFSMPP--PNPPPSCSSFWDNLNVRDRLRDLQDTLDLAKSMQKELEMLMII 64
           P  F    P F   P  P  PP C  FW+  N+ D+L+ LQDTL+LAKSM+KELE L +I
Sbjct: 3   PANFQPPNPPFHWAPMLPPDPPRCGMFWNTKNITDQLKQLQDTLNLAKSMEKELEALKMI 62

Query: 65  KERKSTEQSVDNVPNDTSICEFSECLKDRRVDLELQESRSVEAAAALMRRLRAQLHPFRM 124
           K+ K    SV+N   D+ +    E L+ R++DL  QE  SV+AA +LM  LRAQL PFR 
Sbjct: 63  KDAKG---SVENAVQDSGV----EYLEARKMDLGQQEMLSVDAANSLMSTLRAQLEPFRF 122

Query: 125 VADESSLWEEKHPAVRLSNKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADEWR 184
           V DE+S WEEK  AVRL+ K+ K+ RNK W+KRKR+  AE  AKE E F+Q DREADEWR
Sbjct: 123 VVDENSPWEEKSAAVRLTCKMKKSIRNKLWKKRKRRCAAEMRAKEPERFEQADREADEWR 182

Query: 185 AREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELDLALIVEKLQELRSMRIQKLKKQGH 244
            +E+AKD+A RKV++MK I +IKAK E+K+L+ EL+LALIVE++QELRS+RI+KLKKQGH
Sbjct: 183 EKEMAKDMANRKVDEMKAIEKIKAKRERKRLEPELELALIVEEMQELRSLRIEKLKKQGH 242

Query: 245 FLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIA-----TAVVSRKTIPSYDPESM 304
           FLPEEDDKF E VRAAVE+EE QA +  +T+  +  IA     T   S KT    D +S 
Sbjct: 243 FLPEEDDKFFESVRAAVEQEENQAQSLINTETEEHVIASEENTTLTTSNKTNNDTDKDS- 302

Query: 305 DPNSNTEKCEERNDQRIASAEDMVSSISANKEPGKQFGEGPGYGRVYDYAANLPMEFYHY 364
             N+N   CE     R   A D                         D  +NLP+E YHY
Sbjct: 303 --NTNAASCE-----RTMKAPD----------------------NGCDNISNLPVEVYHY 362

Query: 365 YYGSNTDMGTLIEVRRSWDVYIRPGGSRIPGHWVQPPPPSDEIWAAYLV 407
           YYGSN DMG LIE+RR WD Y+  GGSRIPGHWVQP PP++EIWA+ LV
Sbjct: 363 YYGSNIDMGRLIEIRREWDAYLSAGGSRIPGHWVQPSPPANEIWASCLV 374

[Close]

BLAST of Tan0004260 vs. TAIR 10
Match: AT2G46200.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 353.2 bits (905), Expect = 2.8e-97
Identity = 215/409 (52.57%), Postives = 266/409 (65.04%), Query Frame = 0


Query: 5   PHQFAAQPPLFSMPP--PNPPPSCSSFWDNLNVRDRLRDLQDTLDLAKSMQKELEMLMII 64
           P  F    P F   P  P  PP C  FW+  N+ D+L+ LQDTL+LAKSM+KELE L +I
Sbjct: 3   PANFQPPNPPFHWAPMLPPDPPRCGMFWNTKNITDQLKQLQDTLNLAKSMEKELEALKMI 62

Query: 65  KERKSTEQSVDNVPNDTSICEFSECLKDRRVDLELQESRSVEAAAALMRRLRAQLHPFRM 124
           K+ K    SV+N   D+ +    E L+ R++DL  QE  SV+AA +LM  LRAQL PFR 
Sbjct: 63  KDAKG---SVENAVQDSGV----EYLEARKMDLGQQEMLSVDAANSLMSTLRAQLEPFRF 122

Query: 125 VADESSLWEEKHPAVRLSNKLSKAKRNKQWRKRKRKRIAESLAKERESFDQVDREADEWR 184
           V DE+S WEEK  AVRL+ K+ K+ RNK W+KRKR+  AE  AKE E F+Q DREADEWR
Sbjct: 123 VVDENSPWEEKSAAVRLTCKMKKSIRNKLWKKRKRRCAAEMRAKEPERFEQADREADEWR 182

Query: 185 AREIAKDIAKRKVEKMKEIARIKAKEEKKKLDSELDLALIVEKLQELRSMRIQKLKKQGH 244
            +E+AKD+A RKV++MK I +IKAK E+K+L+ EL+LALIVE++QELRS+RI+KLKKQGH
Sbjct: 183 EKEMAKDMANRKVDEMKAIEKIKAKRERKRLEPELELALIVEEMQELRSLRIEKLKKQGH 242

Query: 245 FLPEEDDKFLEKVRAAVEEEERQALAAADTDAAKDAIA-----TAVVSRKTIPSYDPESM 304
           FLPEEDDKF E VRAAVE+EE QA +  +T+  +  IA     T   S KT    D +S 
Sbjct: 243 FLPEEDDKFFESVRAAVEQEENQAQSLINTETEEHVIASEENTTLTTSNKTNNDTDKDS- 302

Query: 305 DPNSNTEKCEERNDQRIASAEDMVSSISANKEPGKQFGEGPGYGRVYDYAANLPMEFYHY 364
             N+N   CE     R   A D                         D  +NLP+E YHY
Sbjct: 303 --NTNAASCE-----RTMKAPD----------------------NGCDNISNLPVEVYHY 362

Query: 365 YYGSNTDMGTLIEVRRSWDVYIRPGGSRIPGHWVQPPPPSDEIWAAYLV 407
           YYGSN DMG LIE+RR WD Y+  GGSRIPGHWVQP PP++EIWA+ LV
Sbjct: 363 YYGSNIDMGRLIEIRREWDAYLSAGGSRIPGHWVQPSPPANEIWASCLV 374

The following BLAST results are available for this feature:

BLAST of Tan0004260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYD3	3.9e-96	52.57	U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Arabidopsis thaliana O...	[more]

BLAST of Tan0004260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924846.1	3.9e-186	86.55	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucurbita mos...	[more]
KAG7019034.1	5.1e-186	86.31	U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Cucurbita argyrosperma s...	[more]
KAG6582639.1	8.7e-186	86.31	Protein ABIL1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023526863.1	1.5e-185	86.06	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 [Cucurbita pep...	[more]
XP_022147279.1	4.3e-185	85.82	U11/U12 small nuclear ribonucleoprotein 59 kDa protein [Momordica charantia] >XP...	[more]

BLAST of Tan0004260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EAK8	1.9e-186	86.55	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucurbita m...	[more]
A0A6J1CZQ3	2.1e-185	85.82	U11/U12 small nuclear ribonucleoprotein 59 kDa protein OS=Momordica charantia OX...	[more]
A0A6J1IWF2	2.7e-185	86.06	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X2 OS=Cucurbita m...	[more]
A0A6J1EAC6	4.0e-184	85.27	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucurbita m...	[more]
A0A6J1IZE8	5.7e-183	84.78	U11/U12 small nuclear ribonucleoprotein 59 kDa protein isoform X1 OS=Cucurbita m...	[more]

BLAST of Tan0004260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46200.1	2.8e-97	52.57	unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 1...	[more]
AT2G46200.2	2.8e-97	52.57	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 241..261
None	No IPR available	COILS	Coil	Coil	coord: 153..173
None	No IPR available	COILS	Coil	Coil	coord: 181..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..298
None	No IPR available	PANTHER	PTHR48190	FAMILY NOT NAMED	coord: 52..398
IPR031974	Programmed cell death protein 7	PFAM	PF16021	PDCD7	coord: 120..394 e-value: 1.0E-18 score: 67.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0004260.1	Tan0004260.1	mRNA
Tan0004260.2	Tan0004260.2	mRNA
Tan0004260.3	Tan0004260.3	mRNA
Tan0004260.4	Tan0004260.4	mRNA
Tan0004260.5	Tan0004260.5	mRNA
Tan0004260.6	Tan0004260.6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane