Tan0004244 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCTACCACATGAGAGGAAGTAATTCGGGTCTGCAGCTTCTTGGGCGGTCTGTGCCCTTCCCTTCTCTTTGGTTTGCTTCAAATTTTCCTTCAACGGCAATGACAAATCACTTGGCCTTTCAGCTTTCCATTTCCTCAACCAAAACCTTCATCATCCATGGCTTTGCCGCCACTCATAAAGAGAAAGCACTTCCATCCATCTTTTCTGCTTCACCCTTCAAACCCTCACCGATGAATTTCAAATCCAACAACCCAACAACAGTTACAATCACAACCCCAATGCAATTCAATGCAAGTGAGCCTCTTTTCTTCTCGTCTACAAATTTCTTCTTTACCATTTTGTTTTCTGTTCTGTTTTGACGGCTTCTGAGTTTACATTCGTTTGTTTATATCTTTAAAACCCTAAGAAATGAGTCCAAAGGCACACACACGAAGTCTTTTTCAAACGGTAAACCATCGAAATAAATGGCTAGGAATTAAGTCGTGTGTGTATGTGTGTGCTGCTTCCTGGGTTTTGGGAGAATTCCAAGGATTCTGATAGAAATGATATTAGGATAGAATTAAGAATATTATTAAGGTATTAAGGGTATATTAACAATTAGACAGGGAAGTTAATGGTGTTTTGTTATAGATAGAATGAGTATGAAAGGATGAATGTATGGTATGCATTGGTTTAGTTGACTAAGGTGTGAATGAGATTACTGAAGGGGTGGTAGGTTCTAAGTACCTGTTCTTCTATCCCTTATATTTTAGTATCATTCTTGTTGTTTGGATCTATCAGATTCATTGCCATTTGAGAGCAAAAAATTGCTTTACAGGTGCACAAGCAAATGATCTAGTTACAACTGGAATGGAAGAGCAAGCAGAGATGGAAGTTGCAGAGGGATATACCATTTCTCAATTTTGTGATAAAATAATTGACATTTTCTTGAATCAGAAGCCCAAGACTAAGGAATGGAGGAAGTTTTTGGTATTTAGAGAGGAGTGGAAAAAGTATAGGGAGAGCTTCTACAGTCACTGTCAAAGGCTGGCGGATTGGCAGAGTGATCCAAATATGAAAGAGAAGTTAATTTCACTTAGGAGAAAGGTCAAAACGGTATGTCATTGTCCTCTTCTTCTTCCCCTCCATTTGTTTTTTCAACTTTCCTGGTATGATTTTTGTTCACAAAAACCAAATCTTGTTGCATTTGTTTTCGGTTGTAAGAGTTTGAAAACAGAATTTAGAGGAGAATTTAAGCTGTAAATGTTCACTGCTTGTTCATTATTTGGTGAGATTTTCCAATGACCAGAGTGTAATTTGTTTAAACATTTAGAACGGCAACTTTTGTTTTTTGCTTTTTCATTTTTTGATCTCAAGTGAGAAAGATACAGATTGATGATGAAATGGAGATCCACAGTGAACTTCTCAAGGAATTACAGGACAGCCCAACTGACATTAATGCAGTAGTTGCAAAGCGGCGCAAAGAGTTCACAGAGGAATTTTTCAAGTTCCTTACTTTGATTTCAGAAACCCATGATAGTTTGGAAGATCGTGATGGTAATAGTTTGAAAACTTTCAATTCCTTATCTTAGATTTTTCATTTTTTTATCATGAATGAGAAATATTCAGCTTAGATTTAATCTAAGATTTAGTTTATATTTATATTGTCCTTATCTTTTAACCATCTTTAGAAGTATTTAGATGAATTTAATCTTTGTGTAGCCAGGATTATATATTTGCTCTCTTTAAATCTAGAAGCCCTATCATGCATTTTTCACCTAAGTAGTGAATAATTAAAGTTGTCAATCTTGCCAATAAGAGCATAGCTCAACTGGCATTAAGTAAGACTCATGACCAAGAGGTCATAGGTTCGAATCCTCCCACCCCAAATATTGATGTACTCAAAAAAAGTTGTCAATCTTCGTATGTTTTTTCTTAAATTTTGTTCTGGGATTATTATTTGACAAATTTGTATCATGAATTCACACTGTGACATACATTTCATTCTTTATTCTTATTCACCTTTATGACTGATGACTGAATAATGACATTTATAATCTATAGTAGATTTCTCAAGAATTGACTAAAACCCAGAGTTGGGACAACATTTTAACTAGGAGATAGAGTTACTCTATTCTGAAAGAATAAAGAATTAATAAACAAAGACTTTATCATTAGTTCTCTCCTAAATTATTTTTCTTATTTGAGCAGCGGTGGCTCGGCTGGCGGCCAGATGTCTGTCTGCAGTGAGTGCTTACGATCGAACATTAGAAAATGTGGAGACATTAGATGCTGCACAAGTCAAATTTGATGATATACTGAATTCTCCCTCATTGGATGTGGCTTGTGAGAAGATTGCAAGTCTTGCAAAGGCAAAGGAACTTGATTCATCATTGATCCTTTTGATAAACAGTGCTTGGGCTTCTGCAAAAGATTCACCAACCATGAAGAATGAGGTAATGTTTAGATTTAAAACTTGTCATATTTATTTCATTTTAGTACCCAAACTTCAAGTAGTCTGTTTGGTCCAACTTTCAAGTGTTCTGTTTTTTCCTCTAGACTTTGCATAAAACATTATTTTCATTCTTACCTTTAATTTATAGTTAATTTATTTAAGAAGAATTTAACTAAATTTAAAAATCCGATGTCTAATTATTACGTGTACTTGTCTTTATGGACATATATTGATTAGGTAAAATGAAAAAAAAAAAAAAGGAAAAATGGGAATACGTCAGGTTTGTGTTAAAAAATTTAAAAAAACAAAAACAAAAACAAATAATAAGGGTCCCGTTTGATAACCATTTTGTTTTTGGATTTTAATTTTTGAAAGTTAAACTTATGTTCACCTAATTTCTCTACAATAAAGATTATCTCCCTTAAGTAAACATTTGAACTCTTAGCCAAATTCTAAAAACAAAGTCAAGTTTTTGAAAGCTACTTTTTTTAGTTTTCAAAAGTTGGCTTGGTTTTTGAAAACATAGGTACAAAGTAGACAAAAAGACATATAAACTCATTGGTATAAGTAGTATTTTTAGGTTTAAATTTCAAAAACTAAAAACCAAAAACAAAATGGTTATCAAACGGGGGCAAAGGTTTTATGGAAAGTTCAAAAACCAACAGAATGTTTGGAAAGAGGACAAAAATAGAATTCACATAAGAGTCGAGGACTGATTTAGAATCTAAACTTAGTGTATATGTAATGTATCATATGACACTTAACGTTTGCTAATTCTATTTCTAAACCATTATATAATAATGCATTATCAACCTCCTTTCCCAACCATTTCCTTGGTTTTATTTTCACATTAGCCATTTCCATGGTTTGTCTTGTCTCTGCTTCCCCGGTACTGTGTCTTTGGCATGCTTTTTTATTTTTATTTTTTTTTAGTGAAGCATTTATTTGAAATATATTAGTTAAATGCTTCATTTACAAACACTTTTACAATTTCTCCAGCCACTTATGATTCTCGAAAATTTTAAGAACTTTTAAAAGTACTTTTGGTGGTTAAAAGCAGTTTTTACCCGTCATCCAAACACTACCAATTTAAAAAAAGAAAAAAGAGAGAAAAATAGTCATTAATAAGCACTTTAAAGACATGCCAAACACACTAATACACTAAAAAGGGATTGTTGTTTCTATCCTCAAACACTTTTAAGATGCAACTATTATGTCACCTTCTCTGAGTTCTGTCTGTGTGTTTCTCTCTGAGGATGTAGGTGAAAGAAATAATGTATCAATTATACAAAGCCACAAAAAGCAATCTTAGAAGCATGGCTCCTAAAGAAATAAAGCTGTTAAAGCATTTGCTAAATATCATAGATCCTGAAGAACGGTTTTCTGCTTTAGCAACAGCCTTTGCACCTGGTGATGGAAGTGAACCCAAAGATCGGAATGCTATGTACACGTGAGTAAGCCTCATATCATATTCTAATGTACATTCCTTTTTTTTTTTAATGGCGATTACGCATTTCTCCCCTAGGTTTCATTAAAGTTAAAATATCATTTTGGTCCCTCTAATTTGGGACTTGTTCTATTGTAGTCCTTGCGCTTTCAAGTGTATAAATTTAGTCCCCATGCTTTTATTAAATCTTAAATTTTTTTCTCTTCTGCTAGTTTATATATAATAAATAACATTTCTTAAAAAAAATTAGTCTCTATTAACTTTCTTTCTATAAATTTTGGAAATATATTCACATGATGTATTTTCTTGAATAGAACCTATTATTATTTTTTTACCAAGTTGGATAAAAAACAACTTCAAACTAATAATAATGACTAAGTAAAAACTATTTTTAGACATTTGGAAGTACTTGGACTAAAACAGAAGGAATCCCAAAGTGTAGGACCAGAATAGTATTTTATATCTATTTTGGTCTTTGAACTTTTAAATTTAGTCCACTCTAGTCCACGACATTTGTTTCAATTCCCAAACTTTGAGAAACTAACTATTTTGATAATCGTTGCTATTTTGTCGTCAATTATTTATCATTTAAATGACTTGGCTCTAATATGTGTATCAAGAACATGTTTAGGTGGGTACACATTGAAGGCATATAGGGGAATTTATGGATTACAAAGAGCATGAGAATATTTGGAGAAGGAATAATTTTCTTATAAATCTGTTTTTTTTTTTTAATGATTGAGCAGAACTCCAAAAGAGCTGCATAAGTGGATAAAGATGATGCTTGATTCATACCATCTGAACCAGGAAGATACAGACATCAGAGAAGCAAGGCATATGAATCAGCCTGTTGTTATACAAAGGCTATTCATTCTCAAGGATACTATTGAAACTGAGTATTTGTATCAAAATGAGCTTCAGAATTCTGAAACAAAACTAAACCATGTCTCTGAAGATGCAGTTTCCATATAAGTTTGTAAATGCTGTCATTTTTTGTAATCTAGCCAACACTAGGATCGTTAGTTTTGGCATTGACTCGAGAATTATAATGATATATGATTATAAACTATTAAAAGATGAATATTCG GGCTACCACATGAGAGGAAGTAATTCGGGTCTGCAGCTTCTTGGGCGGTCTGTGCCCTTCCCTTCTCTTTGGTTTGCTTCAAATTTTCCTTCAACGGCAATGACAAATCACTTGGCCTTTCAGCTTTCCATTTCCTCAACCAAAACCTTCATCATCCATGGCTTTGCCGCCACTCATAAAGAGAAAGCACTTCCATCCATCTTTTCTGCTTCACCCTTCAAACCCTCACCGATGAATTTCAAATCCAACAACCCAACAACAGTTACAATCACAACCCCAATGCAATTCAATGCAAGTGCACAAGCAAATGATCTAGTTACAACTGGAATGGAAGAGCAAGCAGAGATGGAAGTTGCAGAGGGATATACCATTTCTCAATTTTGTGATAAAATAATTGACATTTTCTTGAATCAGAAGCCCAAGACTAAGGAATGGAGGAAGTTTTTGGTATTTAGAGAGGAGTGGAAAAAGTATAGGGAGAGCTTCTACAGTCACTGTCAAAGGCTGGCGGATTGGCAGAGTGATCCAAATATGAAAGAGAAGTTAATTTCACTTAGGAGAAAGGTCAAAACGATTGATGATGAAATGGAGATCCACAGTGAACTTCTCAAGGAATTACAGGACAGCCCAACTGACATTAATGCAGTAGTTGCAAAGCGGCGCAAAGAGTTCACAGAGGAATTTTTCAAGTTCCTTACTTTGATTTCAGAAACCCATGATAGTTTGGAAGATCGTGATGCGGTGGCTCGGCTGGCGGCCAGATGTCTGTCTGCAGTGAGTGCTTACGATCGAACATTAGAAAATGTGGAGACATTAGATGCTGCACAAGTCAAATTTGATGATATACTGAATTCTCCCTCATTGGATGTGGCTTGTGAGAAGATTGCAAGTCTTGCAAAGGCAAAGGAACTTGATTCATCATTGATCCTTTTGATAAACAGTGCTTGGGCTTCTGCAAAAGATTCACCAACCATGAAGAATGAGGTGAAAGAAATAATGTATCAATTATACAAAGCCACAAAAAGCAATCTTAGAAGCATGGCTCCTAAAGAAATAAAGCTGTTAAAGCATTTGCTAAATATCATAGATCCTGAAGAACGGTTTTCTGCTTTAGCAACAGCCTTTGCACCTGGTGATGGAAGTGAACCCAAAGATCGGAATGCTATGTACACAACTCCAAAAGAGCTGCATAAGTGGATAAAGATGATGCTTGATTCATACCATCTGAACCAGGAAGATACAGACATCAGAGAAGCAAGGCATATGAATCAGCCTGTTGTTATACAAAGGCTATTCATTCTCAAGGATACTATTGAAACTGAGTATTTGTATCAAAATGAGCTTCAGAATTCTGAAACAAAACTAAACCATGTCTCTGAAGATGCAGTTTCCATATAAGTTTGTAAATGCTGTCATTTTTTGTAATCTAGCCAACACTAGGATCGTTAGTTTTGGCATTGACTCGAGAATTATAATGATATATGATTATAAACTATTAAAAGATGAATATTCG ATGAGAGGAAGTAATTCGGGTCTGCAGCTTCTTGGGCGGTCTGTGCCCTTCCCTTCTCTTTGGTTTGCTTCAAATTTTCCTTCAACGGCAATGACAAATCACTTGGCCTTTCAGCTTTCCATTTCCTCAACCAAAACCTTCATCATCCATGGCTTTGCCGCCACTCATAAAGAGAAAGCACTTCCATCCATCTTTTCTGCTTCACCCTTCAAACCCTCACCGATGAATTTCAAATCCAACAACCCAACAACAGTTACAATCACAACCCCAATGCAATTCAATGCAAGTGCACAAGCAAATGATCTAGTTACAACTGGAATGGAAGAGCAAGCAGAGATGGAAGTTGCAGAGGGATATACCATTTCTCAATTTTGTGATAAAATAATTGACATTTTCTTGAATCAGAAGCCCAAGACTAAGGAATGGAGGAAGTTTTTGGTATTTAGAGAGGAGTGGAAAAAGTATAGGGAGAGCTTCTACAGTCACTGTCAAAGGCTGGCGGATTGGCAGAGTGATCCAAATATGAAAGAGAAGTTAATTTCACTTAGGAGAAAGGTCAAAACGATTGATGATGAAATGGAGATCCACAGTGAACTTCTCAAGGAATTACAGGACAGCCCAACTGACATTAATGCAGTAGTTGCAAAGCGGCGCAAAGAGTTCACAGAGGAATTTTTCAAGTTCCTTACTTTGATTTCAGAAACCCATGATAGTTTGGAAGATCGTGATGCGGTGGCTCGGCTGGCGGCCAGATGTCTGTCTGCAGTGAGTGCTTACGATCGAACATTAGAAAATGTGGAGACATTAGATGCTGCACAAGTCAAATTTGATGATATACTGAATTCTCCCTCATTGGATGTGGCTTGTGAGAAGATTGCAAGTCTTGCAAAGGCAAAGGAACTTGATTCATCATTGATCCTTTTGATAAACAGTGCTTGGGCTTCTGCAAAAGATTCACCAACCATGAAGAATGAGGTGAAAGAAATAATGTATCAATTATACAAAGCCACAAAAAGCAATCTTAGAAGCATGGCTCCTAAAGAAATAAAGCTGTTAAAGCATTTGCTAAATATCATAGATCCTGAAGAACGGTTTTCTGCTTTAGCAACAGCCTTTGCACCTGGTGATGGAAGTGAACCCAAAGATCGGAATGCTATGTACACAACTCCAAAAGAGCTGCATAAGTGGATAAAGATGATGCTTGATTCATACCATCTGAACCAGGAAGATACAGACATCAGAGAAGCAAGGCATATGAATCAGCCTGTTGTTATACAAAGGCTATTCATTCTCAAGGATACTATTGAAACTGAGTATTTGTATCAAAATGAGCTTCAGAATTCTGAAACAAAACTAAACCATGTCTCTGAAGATGCAGTTTCCATATAA MRGSNSGLQLLGRSVPFPSLWFASNFPSTAMTNHLAFQLSISSTKTFIIHGFAATHKEKALPSIFSASPFKPSPMNFKSNNPTTVTITTPMQFNASAQANDLVTTGMEEQAEMEVAEGYTISQFCDKIIDIFLNQKPKTKEWRKFLVFREEWKKYRESFYSHCQRLADWQSDPNMKEKLISLRRKVKTIDDEMEIHSELLKELQDSPTDINAVVAKRRKEFTEEFFKFLTLISETHDSLEDRDAVARLAARCLSAVSAYDRTLENVETLDAAQVKFDDILNSPSLDVACEKIASLAKAKELDSSLILLINSAWASAKDSPTMKNEVKEIMYQLYKATKSNLRSMAPKEIKLLKHLLNIIDPEERFSALATAFAPGDGSEPKDRNAMYTTPKELHKWIKMMLDSYHLNQEDTDIREARHMNQPVVIQRLFILKDTIETEYLYQNELQNSETKLNHVSEDAVSI Homology
BLAST of Tan0004244 vs. ExPASy Swiss-Prot
Match: Q84WN0 (Uncharacterized protein At4g37920 OS=Arabidopsis thaliana OX=3702 GN=At4g37920 PE=2 SV=2) HSP 1 Score: 490.7 bits (1262), Expect = 1.8e-137 Identity = 250/374 (66.84%), Postives = 309/374 (82.62%), Query Frame = 0
BLAST of Tan0004244 vs. NCBI nr
Match: XP_038883875.1 (uncharacterized protein At4g37920 isoform X2 [Benincasa hispida]) HSP 1 Score: 718.4 bits (1853), Expect = 4.0e-203 Identity = 375/433 (86.61%), Postives = 397/433 (91.69%), Query Frame = 0
BLAST of Tan0004244 vs. NCBI nr
Match: KAG6603165.1 (hypothetical protein SDJN03_03774, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 714.5 bits (1843), Expect = 5.8e-202 Identity = 371/433 (85.68%), Postives = 399/433 (92.15%), Query Frame = 0
BLAST of Tan0004244 vs. NCBI nr
Match: XP_022933100.1 (uncharacterized protein At4g37920 [Cucurbita moschata]) HSP 1 Score: 714.5 bits (1843), Expect = 5.8e-202 Identity = 371/433 (85.68%), Postives = 398/433 (91.92%), Query Frame = 0
BLAST of Tan0004244 vs. NCBI nr
Match: XP_022967802.1 (uncharacterized protein At4g37920 [Cucurbita maxima]) HSP 1 Score: 713.0 bits (1839), Expect = 1.7e-201 Identity = 369/433 (85.22%), Postives = 398/433 (91.92%), Query Frame = 0
BLAST of Tan0004244 vs. NCBI nr
Match: XP_023544083.1 (uncharacterized protein At4g37920 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 708.4 bits (1827), Expect = 4.1e-200 Identity = 371/434 (85.48%), Postives = 396/434 (91.24%), Query Frame = 0
BLAST of Tan0004244 vs. ExPASy TrEMBL
Match: A0A6J1F3Z5 (uncharacterized protein At4g37920 OS=Cucurbita moschata OX=3662 GN=LOC111439867 PE=4 SV=1) HSP 1 Score: 714.5 bits (1843), Expect = 2.8e-202 Identity = 371/433 (85.68%), Postives = 398/433 (91.92%), Query Frame = 0
BLAST of Tan0004244 vs. ExPASy TrEMBL
Match: A0A6J1HRT8 (uncharacterized protein At4g37920 OS=Cucurbita maxima OX=3661 GN=LOC111467208 PE=4 SV=1) HSP 1 Score: 713.0 bits (1839), Expect = 8.1e-202 Identity = 369/433 (85.22%), Postives = 398/433 (91.92%), Query Frame = 0
BLAST of Tan0004244 vs. ExPASy TrEMBL
Match: A0A1S3B4W5 (uncharacterized protein At4g37920, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486045 PE=4 SV=1) HSP 1 Score: 698.4 bits (1801), Expect = 2.1e-197 Identity = 365/436 (83.72%), Postives = 397/436 (91.06%), Query Frame = 0
BLAST of Tan0004244 vs. ExPASy TrEMBL
Match: A0A0A0L3X1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G515540 PE=4 SV=1) HSP 1 Score: 689.5 bits (1778), Expect = 9.6e-195 Identity = 360/436 (82.57%), Postives = 393/436 (90.14%), Query Frame = 0
BLAST of Tan0004244 vs. ExPASy TrEMBL
Match: A0A6J1DBT6 (uncharacterized protein At4g37920, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018874 PE=4 SV=1) HSP 1 Score: 636.7 bits (1641), Expect = 7.4e-179 Identity = 339/423 (80.14%), Postives = 366/423 (86.52%), Query Frame = 0
BLAST of Tan0004244 vs. TAIR 10
Match: AT4G37920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36320.1); Has 123 Blast hits to 120 proteins in 40 species: Archae - 2; Bacteria - 11; Metazoa - 8; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 490.7 bits (1262), Expect = 1.3e-138 Identity = 250/374 (66.84%), Postives = 309/374 (82.62%), Query Frame = 0
BLAST of Tan0004244 vs. TAIR 10
Match: AT1G36320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 287.3 bits (734), Expect = 2.1e-77 Identity = 151/375 (40.27%), Postives = 244/375 (65.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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