Tan0003968 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCCTAGTAGCACATATTTATAGGAGAGAAGACATACTTATGAAACATATCCAAAGTTTTTAATGATGGAGAGAAGCAAATCATTTTGTGGGTCTTACTCAAATGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAGACCCAAATCATACAGCTTCAATGGGACAATCAACAAGGAAGATGAGGGCAATCCAGAGCTCAAGAGGAGACAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGTAAGCTGAAGAAGTCCTTGAGAAACAGCTTCAAGTGGATCAAGAACAAGTTTTCCCACAGCTTTTATGATGATTGAGTTGTAAATTCTCCTTTTGTAAACTATTCTTGTTTCTGTGTGAGACTACAAGCTTATGCACACTTCAATTCTATGGCCATCTCCACATTGATCCCCAAGCATACAACTAAAAAGTCTTAACATTTGGCCCTACTATATTTGGTTACCACGAAAACTCGTAGAATATTAAATTCTAGGTAGGTGGCCATCATGAATGCAATAAACAGTCAATAGTGAGCATCTAGCATGAATGTAGTAAAACAATATGTTATATTACATATATTACCTAGCATGGATGTAGCAAGCTTGGCATAAGGTCATGAGTTAAAAGATATAAATATAACATCATCAAATTTTAAATGATGTTATGCTTTAGAGACAAGAAAAATAGAAAGCTTTCACAGTCTTTCCATAACATCTCCAGTAGCCATAACAGAGGTTCACATTTGGATGGAATGGATTATCAATACAAAGTTTACTGTCTTCTCCTACACTATCAAGTACTGATATCCAATATAGATGCAAGTCTTTATACATCTCTATCATTGGGATTTCAAAAACTTCATCAAAAGCCAAACAGAAATAAATAAATAAGTGCATTTTTACTCTTAAAGGAATTCGAACTAGAGTTCT GTTCCTAGTAGCACATATTTATAGGAGAGAAGACATACTTATGAAACATATCCAAAGTTTTTAATGATGGAGAGAAGCAAATCATTTTGTGGGTCTTACTCAAATGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAGACCCAAATCATACAGCTTCAATGGGACAATCAACAAGGAAGATGAGGGCAATCCAGAGCTCAAGAGGAGACAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGTAAGCTGAAGAAGTCCTTGAGAAACAGCTTCAAGTGGATCAAGAACAAGTTTTCCCACAGCTTTTATGATGATTGAGTTGTAAATTCTCCTTTTGTAAACTATTCTTGTTTCTGTGTGAGACTACAAGCTTATGCACACTTCAATTCTATGGCCATCTCCACATTGATCCCCAAGCATACAACTAAAAAGTCTTAACATTTGGCCCTACTATATTTGGTTACCACGAAAACTCGTAGAATATTAAATTCTAGGTAGGTGGCCATCATGAATGCAATAAACAGTCAATAGTGAGCATCTAGCATGAATGTAGTAAAACAATATGTTATATTACATATATTACCTAGCATGGATGTAGCAAGCTTGGCATAAGGTCATGAGTTAAAAGATATAAATATAACATCATCAAATTTTAAATGATGTTATGCTTTAGAGACAAGAAAAATAGAAAGCTTTCACAGTCTTTCCATAACATCTCCAGTAGCCATAACAGAGGTTCACATTTGGATGGAATGGATTATCAATACAAAGTTTACTGTCTTCTCCTACACTATCAAGTACTGATATCCAATATAGATGCAAGTCTTTATACATCTCTATCATTGGGATTTCAAAAACTTCATCAAAAGCCAAACAGAAATAAATAAATAAGTGCATTTTTACTCTTAAAGGAATTCGAACTAGAGTTCT ATGATGGAGAGAAGCAAATCATTTTGTGGGTCTTACTCAAATGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAGACCCAAATCATACAGCTTCAATGGGACAATCAACAAGGAAGATGAGGGCAATCCAGAGCTCAAGAGGAGACAAAGAGTAGCTACTTACAATATGTATTCAATGGAAGGTAAGCTGAAGAAGTCCTTGAGAAACAGCTTCAAGTGGATCAAGAACAAGTTTTCCCACAGCTTTTATGATGATTGA MMERSKSFCGSYSNAYGDVRFGFEDRPKSYSFNGTINKEDEGNPELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKFSHSFYDD Homology
BLAST of Tan0003968 vs. NCBI nr
Match: KAE8647476.1 (hypothetical protein Csa_003778 [Cucumis sativus]) HSP 1 Score: 156.4 bits (394), Expect = 1.1e-34 Identity = 77/86 (89.53%), Postives = 77/86 (89.53%), Query Frame = 0
BLAST of Tan0003968 vs. NCBI nr
Match: TYK12983.1 (hypothetical protein E5676_scaffold255G005800 [Cucumis melo var. makuwa]) HSP 1 Score: 148.7 bits (374), Expect = 2.4e-32 Identity = 73/85 (85.88%), Postives = 76/85 (89.41%), Query Frame = 0
BLAST of Tan0003968 vs. NCBI nr
Match: PON52269.1 (hypothetical protein TorRG33x02_308860 [Trema orientale]) HSP 1 Score: 121.7 bits (304), Expect = 3.1e-24 Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of Tan0003968 vs. NCBI nr
Match: PRQ49076.1 (hypothetical protein RchiOBHm_Chr2g0117891 [Rosa chinensis]) HSP 1 Score: 120.6 bits (301), Expect = 6.9e-24 Identity = 60/94 (63.83%), Postives = 70/94 (74.47%), Query Frame = 0
BLAST of Tan0003968 vs. NCBI nr
Match: EXB64484.1 (hypothetical protein L484_006721 [Morus notabilis]) HSP 1 Score: 118.2 bits (295), Expect = 3.4e-23 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 0
BLAST of Tan0003968 vs. ExPASy TrEMBL
Match: A0A0A0KFC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486830 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 5.5e-35 Identity = 77/86 (89.53%), Postives = 77/86 (89.53%), Query Frame = 0
BLAST of Tan0003968 vs. ExPASy TrEMBL
Match: A0A5D3CM35 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005800 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.1e-32 Identity = 73/85 (85.88%), Postives = 76/85 (89.41%), Query Frame = 0
BLAST of Tan0003968 vs. ExPASy TrEMBL
Match: A0A2P5BU01 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_308860 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.5e-24 Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of Tan0003968 vs. ExPASy TrEMBL
Match: A0A2P6RRL4 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0117891 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.3e-24 Identity = 60/94 (63.83%), Postives = 70/94 (74.47%), Query Frame = 0
BLAST of Tan0003968 vs. ExPASy TrEMBL
Match: A0A6A1VCF1 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G025428 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23 Identity = 62/90 (68.89%), Postives = 69/90 (76.67%), Query Frame = 0
BLAST of Tan0003968 vs. TAIR 10
Match: AT4G09890.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 77.0 bits (188), Expect = 8.1e-15 Identity = 41/81 (50.62%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of Tan0003968 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 54.3 bits (129), Expect = 5.6e-08 Identity = 26/51 (50.98%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of Tan0003968 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 53.9 bits (128), Expect = 7.3e-08 Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of Tan0003968 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 48.9 bits (115), Expect = 2.4e-06 Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Tan0003968 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 48.9 bits (115), Expect = 2.4e-06 Identity = 19/34 (55.88%), Postives = 29/34 (85.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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