Tan0003945 (gene) Snake gourd v1

Overview
NameTan0003945
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG01: 101059933 .. 101061778 (-)
RNA-Seq ExpressionTan0003945
SyntenyTan0003945
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAAATGCTCGGATCTTCCTCAATGTACGGTCATCGACGCCTTTGCAATGCCATACGGCTTACGGTACTACTCTTCTTCTTTATGTACATTGTCTTAATCGCTTCTCGATCGCTGTAACTATTGACTCGATGTGATTAACATTTAGGGCTTCGTTTCGGGAATTTCTAAAAATGTTTGTTAAGTTTTTATTCTCTGAATCGGTAGGTTTTGCTTTACTTTTGAAGTGGAAGGATGATTTTAGTGCACTTTCTAGTGATGGATTGGTACTGGCATTGCTTATCTGGTTAGGCATTATGATTGTCTACAATGTTGATGGCGGCTCCTCTACGGTGACAGAGTTTTCGACGTCCAAAACAGGCTTGCGTTTGGCTTTAATATTTTTTTTTTACTCGATATTTGCGGCCTCTGTTTTCGTATTCTTGATTCGGATTGCGTTCCGAATCGAGGAATCTTTAGTACTAGAACCTGCATTGCTGAGAATGTTGAATTGTTCGGCTCCTTCGTGTTTTCGTTAAGGTATTGAGTAGCGTTTTGTTCGTATGAAATTTGTTCTGGTAAATTAGTTCCGGCACTGGAGCCTGGATGCCTCTGTTGCTCTCTGACTCCTTTAGCTCGCTGTGTGTAAAGCTACGGAGAACCGACTGAACTATCAACTTATGTTATTGTGTTGACGGTTGGGAGCTAGTATCTTTTGTTATCATATGCTTAAACATGTTAAATTGACATGAAGATTTGAAGCCTATTTTCTTTTGGCATTATGTTAAAAATTAATAACTTAAATTAATAAGTTAGGGTGAGTTTGATCCTGTTAAAATATTCTTAATCACTCATATTTTTTATTCATGCATACATGAAATGTTGCTCATGTCTTTGAAATATTGCAGCAGTGTTTTGATGAAAGCAAAATATTTCAAATGTTCGTTGAACTTTATTGTGCTTTGACCGTGTATAATGTTTCAAATGTTCAGGCCCAGGCCGTATGCTTCTCTAGCCCTCTCTGCTATCCTGTCGAGTTTCTGTTTTGTCTTGTCTCTAATCTTCTATTTGGTATTTTTGAAGTCCCTGATAGAGAGTTTGTTTTTATATATATTAAAAAAATAATAATAAAGTTGTTGGTGCTCGTGCAGCATATTTACCTTAATTAAGTTGGTGCATGTATAATGCGGATTCTTTTTATAACTTTTCTTCTTTTCTCATTAATTGTAATTGGAGGGTATTCTTATATGCTCTTTTAGATGGACTGAGGTGATACCTTGTCTTCCAAGCTACCTATTTTTCATGAATATATTTTCTTATATTTATGATGAAAAGAATTGAGACCATCTGTTATATATCTACTGTTTAATTTGTGAAACGATAGGTGCAATTAATGAAAATTACTTTTATAATGCTGTGGACTTTTGAAGTATTTGCTTAGGCTGATTGAAGAGGTAGACACTATAAAAATAAAACAAAATAAAGAAGTAAAAGAATATTTATCATTGCTTCTTTTGGATGTTCAGACATTTTGAAGTCATTCCCTTTTCTCCTTAATTTTGGGAAATTGAGGGAGTTGTTAGTTGTTTGTGTTACTCGAACTTCTCGGTAGGGATCCTGCCTTATTGTCTTGCATGGCATCTACATATATATATATATATATTTTTAGTTTAGATCAAGATTCTTTACTGGGTTTTTCTATGCAAACATTGTTTCTGGTTATTCATAATTTCAATAGGATGGTCGTTATTGTTCAGTGTTTTGTTCTAGTATAGAACCCAATGCATCCACTTCTTCTGGAACCTGTGGACAAGTCAATCCAGCCCATAGATCCTTTGTTTCACCCGTCCCTGTCGGTTCTTGA

mRNA sequence

ATGGATCAAATGCTCGGATCTTCCTCAATGTACGGTCATCGACGCCTTTGCAATGCCATACGGCTTACGTGGAAGGATGATTTTAGTGCACTTTCTAGTGATGGATTGGTACTGGCATTGCTTATCTGGTTAGGCATTATGATTGTCTACAATGTTGATGGCGGCTCCTCTACGGATGGTCGTTATTGTTCAGTGTTTTGTTCTAGTATAGAACCCAATGCATCCACTTCTTCTGGAACCTGTGGACAAGTCAATCCAGCCCATAGATCCTTTGTTTCACCCGTCCCTGTCGGTTCTTGA

Coding sequence (CDS)

ATGGATCAAATGCTCGGATCTTCCTCAATGTACGGTCATCGACGCCTTTGCAATGCCATACGGCTTACGTGGAAGGATGATTTTAGTGCACTTTCTAGTGATGGATTGGTACTGGCATTGCTTATCTGGTTAGGCATTATGATTGTCTACAATGTTGATGGCGGCTCCTCTACGGATGGTCGTTATTGTTCAGTGTTTTGTTCTAGTATAGAACCCAATGCATCCACTTCTTCTGGAACCTGTGGACAAGTCAATCCAGCCCATAGATCCTTTGTTTCACCCGTCCCTGTCGGTTCTTGA

Protein sequence

MDQMLGSSSMYGHRRLCNAIRLTWKDDFSALSSDGLVLALLIWLGIMIVYNVDGGSSTDGRYCSVFCSSIEPNASTSSGTCGQVNPAHRSFVSPVPVGS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0003945.1Tan0003945.1mRNA