Tan0003815 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAAAATTCCAGCGGATTCTGTAAAGCGCGTGGGATATTAAAAAAATTAAAAAAGAAAAAAACTTTTTGATTATTTTTAATTTTTGAAAAGTGAGAAACTCTATCTTTTTCCACTAATATATAAGACAGAATATCGACAATTTTAAAGCAACTCCGTAGTTTGCTGAGTTTCCATTTTAAGAGCAAAAGCTTTCTTTGAAATTGAAACAGAAACAGAGAGAGAGAGGGAGCGAGAGATATTCGAATATCTACGGCAATCCACAATCAGGTTCGTTTCGCTACGGATTCAAATTTAGATTTCTTCCTTATTCGACATTCTCAGTCTGCTTTTGGAAATTGTTCTCGGAAAAAAGCTGTTTTGCTTTGATCAGATTTTTGTTAGGGTTCTTGAAGCTCTTTGAATCTCTTATCTATGGATTCGTTTCCATCTTAATGATTGATGTTTGTTTTTTTCTTCTCGCCTTGATACAGATAACCTAATAGGTTTAATTTAATTCCATTATTGAGAATTGACAATGGCGTTGGGGAAGAAGAGCGGTTGTTTGAAATCGAAAAGCGTCGTCTCTGCTGCCGATAAAGGACTGGATTTCGGAGTTGTGAGATATACGCGTGGTTTAGGAAGGAAACGGATTGTGATTTCTTGCAATGAGGAGGATTCGTCTACCGACTTGACGCCGAAGGCACCGTCGAAGAGGCGCTGCAGCGCCATCAATACGACGGTGGACGCCGATATGTCTCTGCTCGAGGCCCTGCCTCAGGAGATTCTGGTTAGTACAAACTTCCATTGATTGAAATTGCTTCCAAATTGTTAAATCTTCGCATTCGGTTCCTCTTTCGACTGTTGTTTCTAAATTGAATTTCCCCCTTTTTCCCTCTCCATCAGATTAGGATTCTCTGCGGTGTGGAACATGATGATTTGAAACAGCTAATCCGCGTTTCGAAAACAATTAACGAAGCGGTAAATATCACTCGCATCATAATTCACTTCATTTGTTTCCATTCTTTTCCTCCAATGATTCTCATTGATTTAGGGTTTCAATTTCATTTACAGACTTTGATTGCAAAAGAATTGCATTTCGCGTACAGCACTCCCTCAAAGGTCCGTGCATTTCGCACCGCCATTGAATTCGACAATTCCAGCGATCTCGACGAGATTGAAGCCCCAAATGCTCCTCCCACAAGACGATTTAGGTCTCCATTAAACAGAAAGAAGCTCGCGGACATTTCGGTGGCCTTATTCGCAGAAGAAGACCAATGGCCAAAGAAAAAGTTGCCCATTGAGACAGAGATATGAATTATAACCCAGAGGACTGTGTAAATACATCTGTGTTATGTTGTTGTAGAAATACACCATTGCTGGTAGGAAGAAAGAAACGGGTCTGAAAATCTCAGATCCTGCTTGAAGCTGTACATGTCCGGACATTTTCACTGACCAATTCTTCAAATCTTTCATTGAAGATGAAGATGGGTAGGTTAGAAAACGAATGCATCTCTTTTATTTTGTACATGTATTACAGAGACAGACTGATGATAGGTAGAAAATTCGTTATTCGTTTACGTTTACCTTTACAAGGGTAGCATTTTGGTTTAATCTCTCTCTCTCTGATACTATGGCTCTCATTCATTCTCTGTCTAATAAAAACGAACCATATTTTCCTCGCAATTTTGTGTGACTATTTACAACATGTTCTGCTTTTGCCTACGTTTTTTGTTTTTTACCTTCCACATTGTATTGCTTGATAGCTAGCGCAGTTGTGGCATTGTTTGTTAAACTCTGCCACTAGCTTTTTCACTATAACAGCCGGAAGAATAGCTCGTACATAACTAACCTATGCTTGTTTTGATTCCATTTTGAATGATTTTCCATAATTGATCAAATGGGCTTGTGGGTTTTTTCTTTTTCCTTTTTGGTGGTGTGTGACGAAATGATCTGTAACGTATGAAAGCAGAAAAAAAAAACGAAGCAGAATTTGGAAACAGAATTAGAAATTATCAGAAGCCTCGACTCGACTTTGATGACAGCTGTTGGTTGTGCTTTTCACTCGCCGAAAGGAGTATGAATTCCTAATTACATGTGGAAATGCTTAAGTACAAGCTGGACTGATGAACTGGCAACCCTGAAATTTCGTCTCTTTGAAGCTTTCAGTTTCAGTTTCATTTCTTCTTGTTCTTCAAATAAGCTAGAAATGAGGATGAAATTTTGAAGTTGTTAAACTATACTCAAAATGACAGATTTTCATCATGGATATGCCATTAATGAGTTGTGGATTGGATTCATTCAAGGACTCATTTCTCTTTTATGCTAAATTTCACACCAAAAAATGGGAAGCTCCTTGTATCCATGTCTCAGGACAGTATTACAAATTACTCAAGCTTGTTTAACTTTTGAAAACAGTCCTCATTCGCCTTAATTCATGTAATTCTATTAGAATGAATGCTAATTAAATTGCTAAGTGTTGAACATTAAGTCAAATGTTATAATATGGCGTAATTGGTTGGATTCCAGTTGTATAAGTATTGATTTCCAGATGGACAACACAGAAGCATTGAACAGAAAAAGCAACAAGATCTTTAAGAAAATCAACCCAAGTATTTATCTATTTCGTGTATTAGATACTGTACAAGGTGTAGATCTTGATATAATAATAATGATG CGAAAATTCCAGCGGATTCTGTAAAGCGCGTGGGATATTAAAAAAATTAAAAAAGAAAAAAACTTTTTGATTATTTTTAATTTTTGAAAAGTGAGAAACTCTATCTTTTTCCACTAATATATAAGACAGAATATCGACAATTTTAAAGCAACTCCGTAGTTTGCTGAGTTTCCATTTTAAGAGCAAAAGCTTTCTTTGAAATTGAAACAGAAACAGAGAGAGAGAGGGAGCGAGAGATATTCGAATATCTACGGCAATCCACAATCAGATAACCTAATAGGTTTAATTTAATTCCATTATTGAGAATTGACAATGGCGTTGGGGAAGAAGAGCGGTTGTTTGAAATCGAAAAGCGTCGTCTCTGCTGCCGATAAAGGACTGGATTTCGGAGTTGTGAGATATACGCGTGGTTTAGGAAGGAAACGGATTGTGATTTCTTGCAATGAGGAGGATTCGTCTACCGACTTGACGCCGAAGGCACCGTCGAAGAGGCGCTGCAGCGCCATCAATACGACGGTGGACGCCGATATGTCTCTGCTCGAGGCCCTGCCTCAGGAGATTCTGATTAGGATTCTCTGCGGTGTGGAACATGATGATTTGAAACAGCTAATCCGCGTTTCGAAAACAATTAACGAAGCGACTTTGATTGCAAAAGAATTGCATTTCGCGTACAGCACTCCCTCAAAGGTCCGTGCATTTCGCACCGCCATTGAATTCGACAATTCCAGCGATCTCGACGAGATTGAAGCCCCAAATGCTCCTCCCACAAGACGATTTAGGTCTCCATTAAACAGAAAGAAGCTCGCGGACATTTCGGTGGCCTTATTCGCAGAAGAAGACCAATGGCCAAAGAAAAAGTTGCCCATTGAGACAGAGATATGAATTATAACCCAGAGGACTGTGTAAATACATCTGTGTTATGTTGTTGTAGAAATACACCATTGCTGGTAGGAAGAAAGAAACGGGTCTGAAAATCTCAGATCCTGCTTGAAGCTGTACATGTCCGGACATTTTCACTGACCAATTCTTCAAATCTTTCATTGAAGATGAAGATGGGTAGGTTAGAAAACGAATGCATCTCTTTTATTTTGTACATGTATTACAGAGACAGACTGATGATAGGTAGAAAATTCGTTATTCGTTTACGTTTACCTTTACAAGGGTAGCATTTTGGTTTAATCTCTCTCTCTCTGATACTATGGCTCTCATTCATTCTCTGTCTAATAAAAACGAACCATATTTTCCTCGCAATTTTGTGTGACTATTTACAACATGTTCTGCTTTTGCCTACGTTTTTTGTTTTTTACCTTCCACATTGTATTGCTTGATAGCTAGCGCAGTTGTGGCATTGTTTGTTAAACTCTGCCACTAGCTTTTTCACTATAACAGCCGGAAGAATAGCTCGTACATAACTAACCTATGCTTGTTTTGATTCCATTTTGAATGATTTTCCATAATTGATCAAATGGGCTTGTGGGTTTTTTCTTTTTCCTTTTTGGTGGTGTGTGACGAAATGATCTGTAACGTATGAAAGCAGAAAAAAAAAACGAAGCAGAATTTGGAAACAGAATTAGAAATTATCAGAAGCCTCGACTCGACTTTGATGACAGCTGTTGGTTGTGCTTTTCACTCGCCGAAAGGAGTATGAATTCCTAATTACATGTGGAAATGCTTAAGTACAAGCTGGACTGATGAACTGGCAACCCTGAAATTTCGTCTCTTTGAAGCTTTCAGTTTCAGTTTCATTTCTTCTTGTTCTTCAAATAAGCTAGAAATGAGGATGAAATTTTGAAGTTGTTAAACTATACTCAAAATGACAGATTTTCATCATGGATATGCCATTAATGAGTTGTGGATTGGATTCATTCAAGGACTCATTTCTCTTTTATGCTAAATTTCACACCAAAAAATGGGAAGCTCCTTGTATCCATGTCTCAGGACAGTATTACAAATTACTCAAGCTTGTTTAACTTTTGAAAACAGTCCTCATTCGCCTTAATTCATGTAATTCTATTAGAATGAATGCTAATTAAATTGCTAAGTGTTGAACATTAAGTCAAATGTTATAATATGGCGTAATTGGTTGGATTCCAGTTGTATAAGTATTGATTTCCAGATGGACAACACAGAAGCATTGAACAGAAAAAGCAACAAGATCTTTAAGAAAATCAACCCAAGTATTTATCTATTTCGTGTATTAGATACTGTACAAGGTGTAGATCTTGATATAATAATAATGATG ATGGCGTTGGGGAAGAAGAGCGGTTGTTTGAAATCGAAAAGCGTCGTCTCTGCTGCCGATAAAGGACTGGATTTCGGAGTTGTGAGATATACGCGTGGTTTAGGAAGGAAACGGATTGTGATTTCTTGCAATGAGGAGGATTCGTCTACCGACTTGACGCCGAAGGCACCGTCGAAGAGGCGCTGCAGCGCCATCAATACGACGGTGGACGCCGATATGTCTCTGCTCGAGGCCCTGCCTCAGGAGATTCTGATTAGGATTCTCTGCGGTGTGGAACATGATGATTTGAAACAGCTAATCCGCGTTTCGAAAACAATTAACGAAGCGACTTTGATTGCAAAAGAATTGCATTTCGCGTACAGCACTCCCTCAAAGGTCCGTGCATTTCGCACCGCCATTGAATTCGACAATTCCAGCGATCTCGACGAGATTGAAGCCCCAAATGCTCCTCCCACAAGACGATTTAGGTCTCCATTAAACAGAAAGAAGCTCGCGGACATTTCGGTGGCCTTATTCGCAGAAGAAGACCAATGGCCAAAGAAAAAGTTGCCCATTGAGACAGAGATATGA MALGKKSGCLKSKSVVSAADKGLDFGVVRYTRGLGRKRIVISCNEEDSSTDLTPKAPSKRRCSAINTTVDADMSLLEALPQEILIRILCGVEHDDLKQLIRVSKTINEATLIAKELHFAYSTPSKVRAFRTAIEFDNSSDLDEIEAPNAPPTRRFRSPLNRKKLADISVALFAEEDQWPKKKLPIETEI Homology
BLAST of Tan0003815 vs. ExPASy Swiss-Prot
Match: O65416 (F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2) HSP 1 Score: 133.3 bits (334), Expect = 2.9e-30 Identity = 82/191 (42.93%), Postives = 117/191 (61.26%), Query Frame = 0
BLAST of Tan0003815 vs. ExPASy Swiss-Prot
Match: Q8GX77 (F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 9.5e-29 Identity = 87/185 (47.03%), Postives = 107/185 (57.84%), Query Frame = 0
BLAST of Tan0003815 vs. ExPASy Swiss-Prot
Match: Q9S9T6 (F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.4e-24 Identity = 75/156 (48.08%), Postives = 98/156 (62.82%), Query Frame = 0
BLAST of Tan0003815 vs. ExPASy Swiss-Prot
Match: Q5XF11 (F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 4.9e-09 Identity = 43/145 (29.66%), Postives = 70/145 (48.28%), Query Frame = 0
BLAST of Tan0003815 vs. NCBI nr
Match: XP_008439907.1 (PREDICTED: F-box protein At4g05010-like [Cucumis melo] >KAA0052721.1 F-box protein [Cucumis melo var. makuwa]) HSP 1 Score: 326.6 bits (836), Expect = 1.4e-85 Identity = 166/190 (87.37%), Postives = 180/190 (94.74%), Query Frame = 0
BLAST of Tan0003815 vs. NCBI nr
Match: TYK13104.1 (F-box protein [Cucumis melo var. makuwa]) HSP 1 Score: 326.6 bits (836), Expect = 1.4e-85 Identity = 166/190 (87.37%), Postives = 179/190 (94.21%), Query Frame = 0
BLAST of Tan0003815 vs. NCBI nr
Match: XP_004134730.1 (F-box protein At4g05010 [Cucumis sativus] >XP_031744056.1 F-box protein At4g05010 [Cucumis sativus] >KGN49188.1 hypothetical protein Csa_003153 [Cucumis sativus]) HSP 1 Score: 323.9 bits (829), Expect = 9.0e-85 Identity = 164/190 (86.32%), Postives = 178/190 (93.68%), Query Frame = 0
BLAST of Tan0003815 vs. NCBI nr
Match: XP_022950447.1 (F-box protein SKIP27-like [Cucurbita moschata] >KAG6603722.1 F-box protein SKIP27, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033902.1 F-box protein SKIP27, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 310.8 bits (795), Expect = 7.9e-81 Identity = 160/191 (83.77%), Postives = 175/191 (91.62%), Query Frame = 0
BLAST of Tan0003815 vs. NCBI nr
Match: XP_022977983.1 (F-box protein SKIP27-like [Cucurbita maxima]) HSP 1 Score: 310.5 bits (794), Expect = 1.0e-80 Identity = 158/190 (83.16%), Postives = 173/190 (91.05%), Query Frame = 0
BLAST of Tan0003815 vs. ExPASy TrEMBL
Match: A0A5A7UGT0 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003340 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 6.7e-86 Identity = 166/190 (87.37%), Postives = 180/190 (94.74%), Query Frame = 0
BLAST of Tan0003815 vs. ExPASy TrEMBL
Match: A0A5D3CPZ7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007130 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 6.7e-86 Identity = 166/190 (87.37%), Postives = 179/190 (94.21%), Query Frame = 0
BLAST of Tan0003815 vs. ExPASy TrEMBL
Match: A0A1S3B0I0 (F-box protein At4g05010-like OS=Cucumis melo OX=3656 GN=LOC103484553 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 6.7e-86 Identity = 166/190 (87.37%), Postives = 180/190 (94.74%), Query Frame = 0
BLAST of Tan0003815 vs. ExPASy TrEMBL
Match: A0A0A0KI01 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516960 PE=4 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 4.3e-85 Identity = 164/190 (86.32%), Postives = 178/190 (93.68%), Query Frame = 0
BLAST of Tan0003815 vs. ExPASy TrEMBL
Match: A0A6J1GEU1 (F-box protein SKIP27-like OS=Cucurbita moschata OX=3662 GN=LOC111453544 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 3.8e-81 Identity = 160/191 (83.77%), Postives = 175/191 (91.62%), Query Frame = 0
BLAST of Tan0003815 vs. TAIR 10
Match: AT4G21510.1 (F-box family protein ) HSP 1 Score: 133.3 bits (334), Expect = 2.1e-31 Identity = 82/191 (42.93%), Postives = 117/191 (61.26%), Query Frame = 0
BLAST of Tan0003815 vs. TAIR 10
Match: AT1G61340.1 (F-box family protein ) HSP 1 Score: 128.3 bits (321), Expect = 6.7e-30 Identity = 87/185 (47.03%), Postives = 107/185 (57.84%), Query Frame = 0
BLAST of Tan0003815 vs. TAIR 10
Match: AT4G05010.1 (F-box family protein ) HSP 1 Score: 113.6 bits (283), Expect = 1.7e-25 Identity = 75/156 (48.08%), Postives = 98/156 (62.82%), Query Frame = 0
BLAST of Tan0003815 vs. TAIR 10
Match: AT1G61340.2 (F-box family protein ) HSP 1 Score: 106.3 bits (264), Expect = 2.7e-23 Identity = 87/231 (37.66%), Postives = 107/231 (46.32%), Query Frame = 0
BLAST of Tan0003815 vs. TAIR 10
Match: AT4G35930.1 (F-box family protein ) HSP 1 Score: 62.8 bits (151), Expect = 3.5e-10 Identity = 43/145 (29.66%), Postives = 70/145 (48.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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