Tan0003755 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACCTTCAAATTTTCCAAATTTTTTTCTTCCTTTTTATCAATTTGTCATTTCTTGCCAAATTTGCTTAAGAATTTCTATCCTTCTCCTATCTCTCTCTCTCTCTCTCTCTCTCTCCTAATTTCTTGATCTAAAAAATTGATCATCATGTCAAGCGAAGCCCGAAAAGATTCGACGGAGGCCGGATCATCGTCGAGGACGGGGGCGGCGGATAATCAGCAGCACCAAGCAGCGGCGGCGCTGAGCCGTTACGAATCACAGAAACGGCGTGACTGGAACACGTTCGGACAGTATCTGAAAAATCAAACGCCGCCGGTAACGCTGTCACAGTGCAACTGCAACCACGTGCTGGAATTCCTGCGGTACCTGGACCAGTTCGGAAAAACAAAGGTTCATTTACATGGGTGTGTATTTTTCGGTCAGCCTGACCCACCTGCCCCTTGCACGTGCCCACTCCGGCAAGCATGGGGCAGCCTGGACGCCCTGATCGGACGGCTTCGAGCGGCGTACGAGGAGCACGGCGGATCGCCGGAAACAAACCCTTTTGGAAATGGAGCAATTCGAATGTATTTAAGGGAAGTGAAGGAAGGTCAAGCCAAAGCTAGAGGAATTCCGTACAAGAAAAAGAAGAGAAAAAGATCAACCCAATTGAAGCCCAACGACGACGACAATAATCAACCCATCAAGCATCTTCCTTGATTCAAATCACTCTTCTACTTCTTTCTCAATTCCTGGTATTTTCCTTTTTTTTTTTTTTTGCCTCCATTTATATTATATTCTAATTAATTTCTTCCCAATATTATTTAATTAACCTTCATTTTCAAATCAATAATTGATTTACATATCCCTCCATTCATTTTAACCTTCTTACTCAAATAAAACCCATTACTTATTGAAATACAAATTAGAGATTGTCTAACCAAACTTAATTATTTGGAGAGGAAAAAAAAACATAAAACATAAAACAAACCCTAGAACCCACTTCAAAAAAACCCTAATTGTAATTTGGATCAATCAGTTATAATAAGACACATGTTATCCTTATCCATTACAATACACACAAAACCTTGTTTTCAAAAAACAAACAACTATATATATATCAAAAGCCACTGTGTTAGAATTGTGGAACCGTACTGTCTCTCTCTCTCTCTCAAATCAAACAAAGCACTATTTTTTTTTTTGATTGACTTAATTAAATACTTCATTTAAATTCTCACCTTTTACTAGTTTTTGGCCCTTTTGTGATTCTGTGCGATTTTGTGCCCCCCATGCATGGATGGAATGACCATTATATAATATATATATATATATAAATAAACATATATATGATATACATTGATTGATATGATACGATGCATGTGAATTTCCTTTGCGAGTGTTTTCCCAGTTTCAAACTGTGCATTTTGTTCTATATATTCAAACAAAATCCACCTCTTCAAAAATTTAAAAAAGAAAAGAAAAAGAAAATAAAAGTTAAATTGTCCCCCTTTTTTCTGTCTCTCTGATTGATTTATGTATGAATCAATGGAACATCATGGGAACTTTGTTCCTAAACAGTCGTTTTTTCTTTTCTTTTTCTTTGTCTCGGTCGCAGATCGATGTGTTTTTGTACTGATTCCACTGCAATATATCATGAACTTGCGCTGTGGATAATTATGTCGTATAAATTATTATTTACAGGCTTCTTTTTTTAAAAAAAAAAATTGGAGAGATATATATTATATATGGTATTAGAAGCATAGATTAGTATTTTTCTTTTATTTTCTGTGGAAAATATAGATTTGAGTTCACTTTTTTATTATCTCAAGATATTCTAGTTTTCTGGTTTAGATTTTAAAAGCCTCCTTAACCATTGACATTAGATTCTTCTACAGTTGAGAATTTGGACTAAATTCATTTAAACAGAATTAATTAGTTCATGTTGATTGAATTAAATGTTAATTTTCATTATTCAAGAAACAATAATTGATAACTTAGGATATTATTAGACTTCTAATTAATAAGCTTTAACATAAGATTTAGAAATGGTCGTTGTGCGATTAAAGATTTAACTTGCCTTTTTTGTTTTTGTGTTTGCCTAATTGCTATTGCATTAGAGAAACTTTCATCATTAAGATCAATTGCTGACGGGTTTGCGATGTGTTATCATTTTGGCCTGTATTTTCTTAAAATGGAACCCGCTAAATAAATAAACTCAACACTTGAAAATTTTATTTTTAAAATTTTGGACCAATAAATTGGTTTTGTGATCTAAAATGAGTTCTTTTTTTTTTATTCTTAGAAATAATGAAAATAGGAAATATATTAATTAGTTTTACATTATTGATTGTGGAAGCAATTGAACTATAATTCCAGATGTAATTCTTTAAAACAGAAGAATTCTTTGAAACATTGAACAGTGTTGCGTTTGATGTTATCAAAATTTTTAAAATTATCATTTTGTAGGACATGATGCATCGACTTATTTTGATCAATATAGAATGTACTTCATATTTCAATATAGAACTTTGAATTTCTTTATTTTGTTATCTATTTTTTTACTGGTATGCAGGACATGATACACTAACTTAGAATGTACTTCATATTCAATATGGAACTTTGAATTTCTTTTTTTTTCTATCTATTTTTTACCAATATTTTAAAAACTCAAGTCTAATTTTAAAAATGGAAAAGAGTAGGCCCGTTTGATATCCATTTGATTTTTAGAAATTATACTTGTTTTCTACAATTTCTTCTCATCTTTTCTATAATGATGTCTATCTTTCTTGAGTTACCATTTTAAGTTTCTAACAAAATTTTAAAAACAAACACAAATTTTTGAAAACTACTTTTTTAAAACATAAGTACAAAGTGGATAAGAAACTTATAACTTTATTGGTAAAAATAGTATTTTTTAGGCTTATTTTTCAAAAAAAAAAAAGAAGATTGTAGTTTTTAAAAAATTGTTTTTGTTTGAATTTGATTAAAAATTCAAATATTTCTTTAAGAAATATTAAAATTATGGTAGACAAATCATAAGAAATTAAGCTTAGATGTTTTTTTTTTTTAAAAAAAAAAACAGAAAATTCAACTTAACCTAACAATTATCCTGTTTTTTAAGTATCTACCACCTTTTAAATGACGTGTATTTTGAAAATAATTATAGAAAGTTGCAATCGAATGCATTTCTAGATTTTTTAAAAGATTTCAAATGCAATTATATTTTTTTGTTTCATTGTTCTTAAGACTTTTTATTTTTTATTTTTTATATCTCCTAAAAAAAGCTTATTTTTATATAAAGATCAAACATGTTTTTTCCCTTTTATAATTTTAAAATGAAAACTAATGTCTTTTCTCTTTGTTAACTTTTGTTTACAACATTAAGAATTAGGGCAGAGGAATTTGAATTCAAGATCATAAACGAAGTTTCATTGAAGCCAAGGGTGGCACGTGTCCCATTTCTCATCATTTTCTTTTTTTTTTCTTTTTTCGTTTCTGAATAATTTTTTTAAAAATTAAATATTATTTTGCTCCTGTGATTATTTTAGTTTTGGACCTTTCAAAAATTCATTTTTTTAGTCTTTATGCTTTTAAAAAGTGACCATTATAATCCTTCATTTCTATTTTTATCTCAAATCTTTTGATTAAGGTGGTTTATATTAGTACTTAATATATTTAATTTGTGCATAATATGTATTATATTTGTCCCTTTTTTGTACTTTTTTAAAATTTTAAATTTTATTATGTCTTGATATATACATTTTGTAGTATTATCTAACATTTCTTGGACTTCAAAGAGTAGAAAAAAATTTTAATTCTAAATGTTTTGAGTTTAATATCTTAGATAGAATAACTTATTCCAGTTTGATACTTTAACATTATTTCATTGAAATGAAAATTTATATTTTTAAAAAATAGAGAGTATTATACAACAAAAACATTTAAATTTGTATGCCTATGTATTTGTGTCTCATCTGATTAAAATTTTCCATAATCATATCTTGTACCTTAATTGATCTAATTACTCCTTTTCATTCCCTTAGTATCTCATTAATTTCAAATCAATTAATTTGGAGCTTAATTAATTGTTTTTTTATGCCCTTGTAATTAATACGTGTATATATATGATCTCTCAGTTCCATTACATGCCATCTGGGGCCCATTTTGTTAATGTTTTTTGTGTCCTTATTTTTCCCTTTCCAGTTTGTAGTTTGAAGAGAAACAGATAATACACTGTGTAATAAAAAAAAAAAAACTTATTCTGAACATTAAAATAAAAAACATTAAGGATCTTTGAATAATTTTTTAAAAATATAAACTCGTTTACTAACTTCTGTTTTTGTTCTTAACAATTATAAAAAATATTGGAAAAGCTTTTATATTATTTCTTTTTCCATTATAGTTTGAGTCTAAGTAATTTAGGTGGGTGGATTTTTTTTTTTTTGTTTTAAAAAAAAACAATTATCAAACTCAGTTATATAGGAACAAAATGTCCCATCAAAATCTTAAACCAATTGAATTTGATTTGATAAAGCATCAATGTTAAAATCTATTAACAAAATTAAATTTATCCTAAGTTCAAGCTTCCATAATATTACTTTCTTTTCATTTTCTTATAGTATTTTTTAGGTAGGATGTCATATTGATATTCAAACTACAATTTAAGGAAAGCATTAAAAATAGATTAAAATACTAAATTTACCCTAATTAAACCAAGCCATTCAAAATTCTAATGGTTATTTAACAAACTCTTAGACCCCGTTTGATAACCATTTGACTTTCAGTTTTTTGTTTTTGAAAATTGTACTTATCTTCTCACCATTTTCTTACAACGGTTCCCACATTTCTTAAGAAAACACTTGAATTCTTAGCTAAATTTCAAAAACAAAAACAAGTTTTTGGAAACTACTTTTCGTAGTTTTCAAATGTTTGCTTGGTTTTTGAAAACACATCTAAAAAGTAGACAAGAAAACATAGAAAACCATAGGTGGAAGTAGTATTTATAGGCTTAATTTTCAAAAACCAAAAACTAGAAACCAAATCGTAATCAAACGGGGCCTTATTAATCTATTAGAATTACAACAAAACGAGAGAAGATCTAATAAATAATCATCTCTGAACTTCAGCTTGCTGTTATTTGTTAAGGTTTTTTTCTAGAATAGAAATTAAACCAAGAATATCCTCTAATTGGTGCCTGTTTCCTAAACTATATATTACAATAATCTATTTATTGCAGTGTGTAGCCACTTTTAAGATTAATAAAACTAAATTACAAAATGTAATTTTACTCTTTTCTTAATTTCAGGACAAGAAAAGCTATCGATCGAGAGTGTATAAATGTGGAACAAGTTGAAGGTTTTCTATCCCATAAAATACTTATGTTGTAGAGTTAATTATATAAAGAAAGAGAGAATTTAAATAAAAATAATAATTAGCATAGTATGTAGCAAAAGCTAGCAAGCAATTATGTGTTTGCTTCCCATTCTAGTTAATTTAAAAAAAAAATGCCTCCCAACTTGTAAGTTCACTTTTTAATTATTCCATATTAGAAGGTGACAACCAAAACTATACATTGTTAGCTCTTTTACCCTTCACATTTAAGAAGAAAAATGTCATTTCTATTCTCCAATTTTCATAAAATATCATC AACCTTCAAATTTTCCAAATTTTTTTCTTCCTTTTTATCAATTTGTCATTTCTTGCCAAATTTGCTTAAGAATTTCTATCCTTCTCCTATCTCTCTCTCTCTCTCTCTCTCTCTCCTAATTTCTTGATCTAAAAAATTGATCATCATGTCAAGCGAAGCCCGAAAAGATTCGACGGAGGCCGGATCATCGTCGAGGACGGGGGCGGCGGATAATCAGCAGCACCAAGCAGCGGCGGCGCTGAGCCGTTACGAATCACAGAAACGGCGTGACTGGAACACGTTCGGACAGTATCTGAAAAATCAAACGCCGCCGGTAACGCTGTCACAGTGCAACTGCAACCACGTGCTGGAATTCCTGCGGTACCTGGACCAGTTCGGAAAAACAAAGGTTCATTTACATGGGTGTGTATTTTTCGGTCAGCCTGACCCACCTGCCCCTTGCACGTGCCCACTCCGGCAAGCATGGGGCAGCCTGGACGCCCTGATCGGACGGCTTCGAGCGGCGTACGAGGAGCACGGCGGATCGCCGGAAACAAACCCTTTTGGAAATGGAGCAATTCGAATGTATTTAAGGGAAGTGAAGGAAGGTCAAGCCAAAGCTAGAGGAATTCCGTACAAGAAAAAGAAGAGAAAAAGATCAACCCAATTGAAGCCCAACGACGACGACAATAATCAACCCATCAAGCATCTTCCTTGATTCAAATCACTCTTCTACTTCTTTCTCAATTCCTGGACAAGAAAAGCTATCGATCGAGAGTGTATAAATGTGGAACAAGTTGAAGGTTTTCTATCCCATAAAATACTTATGTTGTAGAGTTAATTATATAAAGAAAGAGAGAATTTAAATAAAAATAATAATTAGCATAGTATGTAGCAAAAGCTAGCAAGCAATTATGTGTTTGCTTCCCATTCTAGTTAATTTAAAAAAAAAATGCCTCCCAACTTGTAAGTTCACTTTTTAATTATTCCATATTAGAAGGTGACAACCAAAACTATACATTGTTAGCTCTTTTACCCTTCACATTTAAGAAGAAAAATGTCATTTCTATTCTCCAATTTTCATAAAATATCATC ATGTCAAGCGAAGCCCGAAAAGATTCGACGGAGGCCGGATCATCGTCGAGGACGGGGGCGGCGGATAATCAGCAGCACCAAGCAGCGGCGGCGCTGAGCCGTTACGAATCACAGAAACGGCGTGACTGGAACACGTTCGGACAGTATCTGAAAAATCAAACGCCGCCGGTAACGCTGTCACAGTGCAACTGCAACCACGTGCTGGAATTCCTGCGGTACCTGGACCAGTTCGGAAAAACAAAGGTTCATTTACATGGGTGTGTATTTTTCGGTCAGCCTGACCCACCTGCCCCTTGCACGTGCCCACTCCGGCAAGCATGGGGCAGCCTGGACGCCCTGATCGGACGGCTTCGAGCGGCGTACGAGGAGCACGGCGGATCGCCGGAAACAAACCCTTTTGGAAATGGAGCAATTCGAATGTATTTAAGGGAAGTGAAGGAAGGTCAAGCCAAAGCTAGAGGAATTCCGTACAAGAAAAAGAAGAGAAAAAGATCAACCCAATTGAAGCCCAACGACGACGACAATAATCAACCCATCAAGCATCTTCCTTGA MSSEARKDSTEAGSSSRTGAADNQQHQAAAALSRYESQKRRDWNTFGQYLKNQTPPVTLSQCNCNHVLEFLRYLDQFGKTKVHLHGCVFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGNGAIRMYLREVKEGQAKARGIPYKKKKRKRSTQLKPNDDDNNQPIKHLP Homology
BLAST of Tan0003755 vs. ExPASy Swiss-Prot
Match: Q9S7R3 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=LSH10 PE=1 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 7.2e-66 Identity = 113/134 (84.33%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of Tan0003755 vs. ExPASy Swiss-Prot
Match: Q9LW68 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 4.5e-60 Identity = 113/164 (68.90%), Postives = 134/164 (81.71%), Query Frame = 0
BLAST of Tan0003755 vs. ExPASy Swiss-Prot
Match: A2XED8 (Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 2.2e-59 Identity = 112/162 (69.14%), Postives = 128/162 (79.01%), Query Frame = 0
BLAST of Tan0003755 vs. ExPASy Swiss-Prot
Match: Q941W1 (Protein G1-like7 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L7 PE=1 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 2.2e-59 Identity = 112/162 (69.14%), Postives = 128/162 (79.01%), Query Frame = 0
BLAST of Tan0003755 vs. ExPASy Swiss-Prot
Match: Q6ATW6 (Protein G1-like8 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L8 PE=1 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 6.5e-59 Identity = 110/161 (68.32%), Postives = 127/161 (78.88%), Query Frame = 0
BLAST of Tan0003755 vs. NCBI nr
Match: XP_008465553.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo] >XP_016903415.1 PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo]) HSP 1 Score: 321.2 bits (822), Expect = 5.6e-84 Identity = 164/189 (86.77%), Postives = 167/189 (88.36%), Query Frame = 0
BLAST of Tan0003755 vs. NCBI nr
Match: KAA0057039.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa]) HSP 1 Score: 320.9 bits (821), Expect = 7.4e-84 Identity = 164/190 (86.32%), Postives = 167/190 (87.89%), Query Frame = 0
BLAST of Tan0003755 vs. NCBI nr
Match: XP_038896042.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida] >XP_038896043.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida]) HSP 1 Score: 318.9 bits (816), Expect = 2.8e-83 Identity = 165/191 (86.39%), Postives = 167/191 (87.43%), Query Frame = 0
BLAST of Tan0003755 vs. NCBI nr
Match: XP_022955058.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita moschata]) HSP 1 Score: 317.8 bits (813), Expect = 6.2e-83 Identity = 159/193 (82.38%), Postives = 167/193 (86.53%), Query Frame = 0
BLAST of Tan0003755 vs. NCBI nr
Match: XP_022994266.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita maxima]) HSP 1 Score: 317.4 bits (812), Expect = 8.1e-83 Identity = 159/193 (82.38%), Postives = 167/193 (86.53%), Query Frame = 0
BLAST of Tan0003755 vs. ExPASy TrEMBL
Match: A0A1S4E614 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC103503180 PE=3 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 2.7e-84 Identity = 164/189 (86.77%), Postives = 167/189 (88.36%), Query Frame = 0
BLAST of Tan0003755 vs. ExPASy TrEMBL
Match: A0A5A7UU18 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002260 PE=3 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 3.6e-84 Identity = 164/190 (86.32%), Postives = 167/190 (87.89%), Query Frame = 0
BLAST of Tan0003755 vs. ExPASy TrEMBL
Match: A0A6J1GSW5 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 GN=LOC111457135 PE=3 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 3.0e-83 Identity = 159/193 (82.38%), Postives = 167/193 (86.53%), Query Frame = 0
BLAST of Tan0003755 vs. ExPASy TrEMBL
Match: A0A6J1JYM4 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=LOC111490052 PE=3 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 3.9e-83 Identity = 159/193 (82.38%), Postives = 167/193 (86.53%), Query Frame = 0
BLAST of Tan0003755 vs. ExPASy TrEMBL
Match: A0A6J1KGX1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=LOC111495158 PE=3 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 2.0e-82 Identity = 162/186 (87.10%), Postives = 170/186 (91.40%), Query Frame = 0
BLAST of Tan0003755 vs. TAIR 10
Match: AT2G42610.1 (Protein of unknown function (DUF640) ) HSP 1 Score: 251.5 bits (641), Expect = 5.1e-67 Identity = 113/134 (84.33%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of Tan0003755 vs. TAIR 10
Match: AT2G42610.2 (Protein of unknown function (DUF640) ) HSP 1 Score: 251.5 bits (641), Expect = 5.1e-67 Identity = 113/134 (84.33%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of Tan0003755 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) ) HSP 1 Score: 232.3 bits (591), Expect = 3.2e-61 Identity = 113/164 (68.90%), Postives = 134/164 (81.71%), Query Frame = 0
BLAST of Tan0003755 vs. TAIR 10
Match: AT4G18610.1 (Protein of unknown function (DUF640) ) HSP 1 Score: 228.4 bits (581), Expect = 4.6e-60 Identity = 113/160 (70.62%), Postives = 128/160 (80.00%), Query Frame = 0
BLAST of Tan0003755 vs. TAIR 10
Match: AT1G78815.1 (Protein of unknown function (DUF640) ) HSP 1 Score: 224.2 bits (570), Expect = 8.7e-59 Identity = 114/182 (62.64%), Postives = 137/182 (75.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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