Tan0003404 (gene) Snake gourd v1

Overview


Name	Tan0003404
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RPM1-interacting protein 4 (RIN4) family protein
Location	LG01: 19621921 .. 19624521 (-)
RNA-Seq Expression	Tan0003404
Synteny	Tan0003404

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAATAAGCCTGATTTGGCCCAAACAAAACAAAATTCTTTCTTCTTCTTCTTCTTCTCTCTCGCTCGCTCGCTCTCCTGGTGTGGCCATCCTCTTTCTTCCATTCTTCGAGTCTTCGTTTACTGGCAAGGAACCTTCTCCTTTTCTCCACTTTCTCGAATTCATGTCGGTATGTCAGTCCTTTTCCTCTTTCTCTTCCCAAATCGATTTTTTCCCCTTCTCGATTGATTACGATTCCATTTTGTTCGATTCGATTTATTTCCCATTCATTAATTTACTTATCTGACTTGGGTTTTTTCTTTTAATTGATTGTTGATTTTCCCATTTTGTTGTTTTGATCATGATCCCCCTTTTAGATTCGCTGCTTTTATTGTTCGTATTTTCTTTACCCCCTTTTTTCTTGGAGATTTGGCGATGCTTGTCATGCCTGGATTTTCTCTCCCCCATTATGTTTTTTCATACGAATTTGTTAAAATTTGGAGGATTTGTTTGTGATTTTTGTGAATCTACGTCTCTCTCTTGTCTGAATTTGTTCGAAATGTTCCGTCTTTTGTCTGATCTTATCATCTGGTGGGTTCAGCCACTCGGACTCAACATTTTTGTTTGCATTGAATTTCCATTATATGATTCATGGGGGGTAATTCAGTTTTTCTTTCCAATTGATTGATGGAACTTGATCGACTAAGCTATGTTTAAATTTTAAATCAGCTGTGAAGAAACATTATTAGTTTTTCCCATCACCTTCTTATCTGTTTATCTCGCACTTTTTTCGTCTAATTCTGATTGCTGCTATTAATGATGGGATTAGATTATCCTTATTTTAGCACATCAATGAAAGAGCAGTTAACCCTTCGACTTTTCACTTCAAAATCTAGGATCTATATATTTTGAGAGACTAATGGTTCAAAATTTTAATTCTCATATTCATTATTCGGTGTATGACTGCTTTTGATCGACACAACTATGACTTGTAGCAAGGAAAATATTTTTTGTTGGGTTAAATTCTAAATTTAGATTTTTATTTTATGTACTATGAGTTTTATTAGTCTTTAAGCTTTTAAAAAATTCTATTGGGATTCAAATCTCTGATCTCTTAGTCAAAGGTATATGCCTAAACCAGTTTAGGCATGCTCAGATTGACATTACATCATAAACTTTGAAGTTTGCTTTTGTGTAGTCCTTGCCATTGCATTATTAATAGAAAACATATGTAGCATGTGTGCTAGATAAATTTTGGCTGAGATGTGGTAAATAGGATATGTTTGCGTTCCACTTCCACTAATAGTAGTATTATTGGTCAACAGTAGGGACTAGATAGATACATAATCAATATTCAGAGACATAATTATTTTATTGTTTAGAACCACAAAGACACTAAGCTAAGTATATGGACTCAATATAATTCGACCTTTTGACTTTTTTATTTTATATTAGATAATAGACACATATATGTTTATTTTAACAGGGGAAGGGTCAGCCACTACCGAAGTTTGGTGAATGGGATGTCAATAATCCTGCTTCAGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATGAGAAGAAAACCGGTGGCCAACCTGAATCACCTGGAAAGGTGTCTCAAGCAAAACGTGCAGCAGATTATGGGAAACCTCAGTCTGTAAGATGCTATAAAAACAATTTTTTCTCTAGCCTTTTTTTCATACCTGATATATTGTTCATTGTGAATATTTACTGCTCATCCATGCCCAAATATGTTTGGAATACCATTAGGATAAAGAGGGTTGGTTATAAACAGAGAAGAGGGAATGGGAAGAGATGAAGGTTGACAATAGTTTAGTGCTTTAGGCTGATTGAGAATACTCTTGAGGGGCGGTCCCTACCAAGTACCTCAAATAGTTGAAGAGTCATTGTAGCTCTCCACCTTTTATATTTCAATTTCATTTCAGCTATCCACTCCACAATTAAAAAAAATATATTTTAGTATCACATTTCAGTTCTTTGGTTTCTATCAAAATAGAAAGTTTTCTTCTAAGAATTATCTTATAAATGACTCCTCCAATTAACTAGACTCTGTGCTTGTTTGATCTTGAAAATGCATCAAATAAGTATCAAATTGCATTCACTTTTAATTGAAATGCAATAGATGAAAAAAGTGGAAAATGTGGAAAATTGATCTATTTTGGCAATATCTAATTGGTGCCATTTCTTTATGAGCTGTTACACCTTTCCCTCACGTGGATGATTTTCCTGCTGTTCCAGAAGAAATGGTTCTGCTGCATCCAGAGCCCACCTACGCAATCTTGATGGTATTACCTTTCTGTAGATAACCGTATTGCTCTGCAATCGTCTCACTGGTTTTCGATAGAAGATGAGATTTGTAAAGCTGTGATCAGCCTGCCATACTATTTGGCTTCATAGAGGAAAAAAGTCGAAGAATTTTATGAGCTGTATTTGTGGTGAATTGTTAGTAGAAGCTGAGCTATGCTGTCTCATTTGTTTCTGCTTCCTTTTTTGTCCCTTTTTTTGGTTGTTTTTTAAGAAGCAGTTTGCTCCTTATTATATCTGATATTGAATTTCTATTATTGTATGTGAAATGGTTTCTTTTTCTCTTTTT

mRNA sequence

GTAATAAGCCTGATTTGGCCCAAACAAAACAAAATTCTTTCTTCTTCTTCTTCTTCTCTCTCGCTCGCTCGCTCTCCTGGTGTGGCCATCCTCTTTCTTCCATTCTTCGAGTCTTCGTTTACTGGCAAGGAACCTTCTCCTTTTCTCCACTTTCTCGAATTCATGTCGGGGAAGGGTCAGCCACTACCGAAGTTTGGTGAATGGGATGTCAATAATCCTGCTTCAGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATGAGAAGAAAACCGGTGGCCAACCTGAATCACCTGGAAAGGTGTCTCAAGCAAAACGTGCAGCAGATTATGGGAAACCTCAGTCTAAGAAATGGTTCTGCTGCATCCAGAGCCCACCTACGCAATCTTGATGGTATTACCTTTCTGTAGATAACCGTATTGCTCTGCAATCGTCTCACTGGTTTTCGATAGAAGATGAGATTTGTAAAGCTGTGATCAGCCTGCCATACTATTTGGCTTCATAGAGGAAAAAAGTCGAAGAATTTTATGAGCTGTATTTGTGGTGAATTGTTAGTAGAAGCTGAGCTATGCTGTCTCATTTGTTTCTGCTTCCTTTTTTGTCCCTTTTTTTGGTTGTTTTTTAAGAAGCAGTTTGCTCCTTATTATATCTGATATTGAATTTCTATTATTGTATGTGAAATGGTTTCTTTTTCTCTTTTT

Coding sequence (CDS)

ATGTCGGGGAAGGGTCAGCCACTACCGAAGTTTGGTGAATGGGATGTCAATAATCCTGCTTCAGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATGAGAAGAAAACCGGTGGCCAACCTGAATCACCTGGAAAGGTGTCTCAAGCAAAACGTGCAGCAGATTATGGGAAACCTCAGTCTAAGAAATGGTTCTGCTGCATCCAGAGCCCACCTACGCAATCTTGA

Protein sequence

MSGKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQAKRAADYGKPQSKKWFCCIQSPPTQS

Homology

[Close]

BLAST of Tan0003404 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 4.4e-25
Identity = 55/79 (69.62%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 1  MSGKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQA---KRAADY 60
          MS KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK S+        D 
Sbjct: 1  MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDP 60

Query: 61 GKPQSKKWFCCIQSPPTQS 77
           KPQ KKW CC+Q+P   S
Sbjct: 61 SKPQPKKWLCCMQAPAVDS 79

[Close]

BLAST of Tan0003404 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 4.5e-06
Identity = 23/61 (37.70%), Postives = 36/61 (59.02%), Query Frame = 0


Query: 8   LPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQAKRAADYGKPQSKKWFC 67
           +PKFG+WD NNP+SA+G+T IFNK R+E+ +G       +    + + +   P +    C
Sbjct: 148 VPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQSSRN---PNNTSSCC 205

Query: 68  C 69
           C
Sbjct: 208 C 205

[Close]

BLAST of Tan0003404 vs. NCBI nr
Match: XP_008449047.1 (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 147.9 bits (372), Expect = 3.5e-32
Identity = 69/76 (90.79%), Postives = 70/76 (92.11%), Query Frame = 0


Query: 1  MSGKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQAKRAADYGKP 60
          MS KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK  QAK  AD GKP
Sbjct: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKNVADPGKP 60

Query: 61 QSKKWFCCIQSPPTQS 77
          Q+KKWFCCIQSPPTQS
Sbjct: 61 QAKKWFCCIQSPPTQS 76

[Close]

BLAST of Tan0003404 vs. NCBI nr
Match: XP_004148258.1 (protein NOI4 [Cucumis sativus] >KGN56031.1 hypothetical protein Csa_009963 [Cucumis sativus])

HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 0


Query: 1  MSGKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQAKRAADYGKP 60
          MS KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK  +AK  AD GKP
Sbjct: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60

Query: 61 QSKKWFCCIQSPPTQS 77
          Q+KKWFCCIQSPPTQS
Sbjct: 61 QAKKWFCCIQSPPTQS 76

[Close]

BLAST of Tan0003404 vs. NCBI nr
Match: XP_038905925.1 (protein NOI4-like [Benincasa hispida])

HSP 1 Score: 140.6 bits (353), Expect = 5.7e-30
Identity = 67/76 (88.16%), Postives = 70/76 (92.11%), Query Frame = 0


Query: 1  MSGKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQAKRAADYGKP 60
          MS KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK  QAK AAD GKP
Sbjct: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKHAADPGKP 60

Query: 61 QSKKWFCCIQSPPTQS 77
          Q+KKWFCCI+ PPT+S
Sbjct: 61 QAKKWFCCIR-PPTES 75

[Close]

BLAST of Tan0003404 vs. NCBI nr
Match: XP_022144004.1 (RPM1-interacting protein 4-like isoform X1 [Momordica charantia])

HSP 1 Score: 140.2 bits (352), Expect = 7.4e-30
Identity = 67/76 (88.16%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 1  MSGKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQAKRAADYGKP 60
          MS KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQ ES  K +Q KR AD GKP
Sbjct: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGKP 60

Query: 61 QSKKWFCCIQSPPTQS 77
          QSKKWFCCIQSPPTQS
Sbjct: 61 QSKKWFCCIQSPPTQS 76

[Close]

BLAST of Tan0003404 vs. NCBI nr
Match: KAF5461208.1 (hypothetical protein F2P56_021025, partial [Juglans regia])

HSP 1 Score: 137.9 bits (346), Expect = 3.7e-29
Identity = 65/77 (84.42%), Postives = 69/77 (89.61%), Query Frame = 0


Query: 1   MSGKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKV-SQAKRAADYGK 60
           MS KGQPLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG PESPGKV SQ+K A D GK
Sbjct: 41  MSDKGQPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGNPESPGKVDSQSKPAVDVGK 100

Query: 61  PQSKKWFCCIQSPPTQS 77
           PQ+KKWFCC+Q PPT S
Sbjct: 101 PQAKKWFCCLQDPPTHS 117

[Close]

BLAST of Tan0003404 vs. ExPASy TrEMBL
Match: A0A1S3BL66 (RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103491035 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.7e-32
Identity = 69/76 (90.79%), Postives = 70/76 (92.11%), Query Frame = 0


Query: 1  MSGKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQAKRAADYGKP 60
          MS KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK  QAK  AD GKP
Sbjct: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPQAKNVADPGKP 60

Query: 61 QSKKWFCCIQSPPTQS 77
          Q+KKWFCCIQSPPTQS
Sbjct: 61 QAKKWFCCIQSPPTQS 76

[Close]

BLAST of Tan0003404 vs. ExPASy TrEMBL
Match: A0A0A0L7F7 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G047910 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.0e-32
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 0


Query: 1  MSGKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQAKRAADYGKP 60
          MS KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK  +AK  AD GKP
Sbjct: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKP 60

Query: 61 QSKKWFCCIQSPPTQS 77
          Q+KKWFCCIQSPPTQS
Sbjct: 61 QAKKWFCCIQSPPTQS 76

[Close]

BLAST of Tan0003404 vs. ExPASy TrEMBL
Match: A0A6J1CR09 (RPM1-interacting protein 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013789 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.6e-30
Identity = 67/76 (88.16%), Postives = 68/76 (89.47%), Query Frame = 0


Query: 1  MSGKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQAKRAADYGKP 60
          MS KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQ ES  K +Q KR AD GKP
Sbjct: 1  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQSESSPKNAQGKRVADSGKP 60

Query: 61 QSKKWFCCIQSPPTQS 77
          QSKKWFCCIQSPPTQS
Sbjct: 61 QSKKWFCCIQSPPTQS 76

[Close]

BLAST of Tan0003404 vs. ExPASy TrEMBL
Match: A0A2I4F1A1 (protein NOI4 OS=Juglans regia OX=51240 GN=LOC108994597 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.8e-29
Identity = 65/77 (84.42%), Postives = 69/77 (89.61%), Query Frame = 0


Query: 1  MSGKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKV-SQAKRAADYGK 60
          MS KGQPLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG PESPGKV SQ+K A D GK
Sbjct: 1  MSDKGQPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGNPESPGKVDSQSKPAVDVGK 60

Query: 61 PQSKKWFCCIQSPPTQS 77
          PQ+KKWFCC+Q PPT S
Sbjct: 61 PQAKKWFCCLQDPPTHS 77

[Close]

BLAST of Tan0003404 vs. ExPASy TrEMBL
Match: A0A6P9E4Z8 (protein NOI4-like OS=Juglans regia OX=51240 GN=LOC118347547 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.8e-29
Identity = 62/76 (81.58%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 1  MSGKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQAKRAADYGKP 60
          MS KGQPLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+PESPG V   K   D GKP
Sbjct: 1  MSDKGQPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPGNVDSQKPGVDAGKP 60

Query: 61 QSKKWFCCIQSPPTQS 77
          Q+KKWFCCIQ PPT S
Sbjct: 61 QAKKWFCCIQDPPTHS 76

[Close]

BLAST of Tan0003404 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 111.7 bits (278), Expect = 2.6e-25
Identity = 53/76 (69.74%), Postives = 59/76 (77.63%), Query Frame = 0


Query: 4  KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQA---KRAADYGKP 63
          KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK S+        D  KP
Sbjct: 20 KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKP 79

Query: 64 QSKKWFCCIQSPPTQS 77
          Q KKW CC+Q+P   S
Sbjct: 80 QPKKWLCCMQAPAVDS 95

[Close]

BLAST of Tan0003404 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 95.1 bits (235), Expect = 2.5e-20
Identity = 47/73 (64.38%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 1  MSGKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQA--KRAADYG 60
          M+ KG+PLPKFGEWDVN+P+SAEGFTVIFNKAR+EKK GG+ +SPGK      K      
Sbjct: 1  MADKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEVLE 60

Query: 61 KPQSKKWFCCIQS 72
          KP +KKWFCCI++
Sbjct: 61 KP-AKKWFCCIRA 72

[Close]

BLAST of Tan0003404 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 94.4 bits (233), Expect = 4.3e-20
Identity = 48/67 (71.64%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 1  MSGKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQA---KRAADY 60
          MS KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK S+        D 
Sbjct: 1  MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDP 60

Query: 61 GKPQSKK 65
           KPQ  K
Sbjct: 61 SKPQPVK 67

[Close]

BLAST of Tan0003404 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 91.3 bits (225), Expect = 3.7e-19
Identity = 46/64 (71.88%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 4  KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKVSQA---KRAADYGKP 63
          KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK S+        D  KP
Sbjct: 20 KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKP 79

Query: 64 QSKK 65
          Q  K
Sbjct: 80 QPVK 83

[Close]

BLAST of Tan0003404 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 73.6 bits (179), Expect = 7.9e-14
Identity = 42/74 (56.76%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 4  KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT----GGQPE---SPGKVSQAKRAAD 63
          KG+PLPKFGEWDVNNPASAEGFTVIF+KA DEKKT    G  P    SP +   + +  +
Sbjct: 5  KGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSDQNNN 64

Query: 64 YG--KPQSK-KWFC 68
          +    P++K KWFC
Sbjct: 65 HSSQNPKAKNKWFC 78

The following BLAST results are available for this feature:

BLAST of Tan0003404 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22633	4.4e-25	69.62	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8GYN5	4.5e-06	37.70	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of Tan0003404 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449047.1	3.5e-32	90.79	PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]	[more]
XP_004148258.1	1.0e-31	89.47	protein NOI4 [Cucumis sativus] >KGN56031.1 hypothetical protein Csa_009963 [Cucu...	[more]
XP_038905925.1	5.7e-30	88.16	protein NOI4-like [Benincasa hispida]	[more]
XP_022144004.1	7.4e-30	88.16	RPM1-interacting protein 4-like isoform X1 [Momordica charantia]	[more]
KAF5461208.1	3.7e-29	84.42	hypothetical protein F2P56_021025, partial [Juglans regia]	[more]

BLAST of Tan0003404 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BL66	1.7e-32	90.79	RPM1-interacting protein 4-like OS=Cucumis melo OX=3656 GN=LOC103491035 PE=4 SV=...	[more]
A0A0A0L7F7	5.0e-32	89.47	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G04...	[more]
A0A6J1CR09	3.6e-30	88.16	RPM1-interacting protein 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A2I4F1A1	1.8e-29	84.42	protein NOI4 OS=Juglans regia OX=51240 GN=LOC108994597 PE=4 SV=1	[more]
A0A6P9E4Z8	8.8e-29	81.58	protein NOI4-like OS=Juglans regia OX=51240 GN=LOC118347547 PE=4 SV=1	[more]

BLAST of Tan0003404 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55850.3	2.6e-25	69.74	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	2.5e-20	64.38	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.1	4.3e-20	71.64	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	3.7e-19	71.88	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G63270.1	7.9e-14	56.76	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 4..38 e-value: 3.2E-23 score: 80.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..60
None	No IPR available	PANTHER	PTHR33159:SF64	RPM1-INTERACTING PROTEIN 4-LIKE	coord: 1..72
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003404.1	Tan0003404.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane