Tan0003378 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGCAACAACCGCCACAAAAAAACTCACTCTTCCTTCTCAATCTTTAGTTTTTTCAAATCCAAAAGGGCTCGGAAAGGAGATCACTGCGACGACGAGATAGCTAGATCGAGCAAGGTGTGGCCGAGCGATGAGGACAAAGCTCATCGTTGGGTTGGCGAACCTGGTATTGACAGAAAAGCCAAAGATTATATTGACAGGATCTATCGAAATCGTGTTTTAGAATCCGAGCGCCAAACTGTCACTATTCATCCCAATTCAACGACACCCAATATGTGA ATGGGAGGCAACAACCGCCACAAAAAAACTCACTCTTCCTTCTCAATCTTTAGTTTTTTCAAATCCAAAAGGGCTCGGAAAGGAGATCACTGCGACGACGAGATAGCTAGATCGAGCAAGGTGTGGCCGAGCGATGAGGACAAAGCTCATCGTTGGGTTGGCGAACCTGGTATTGACAGAAAAGCCAAAGATTATATTGACAGGATCTATCGAAATCGTGTTTTAGAATCCGAGCGCCAAACTGTCACTATTCATCCCAATTCAACGACACCCAATATGTGA ATGGGAGGCAACAACCGCCACAAAAAAACTCACTCTTCCTTCTCAATCTTTAGTTTTTTCAAATCCAAAAGGGCTCGGAAAGGAGATCACTGCGACGACGAGATAGCTAGATCGAGCAAGGTGTGGCCGAGCGATGAGGACAAAGCTCATCGTTGGGTTGGCGAACCTGGTATTGACAGAAAAGCCAAAGATTATATTGACAGGATCTATCGAAATCGTGTTTTAGAATCCGAGCGCCAAACTGTCACTATTCATCCCAATTCAACGACACCCAATATGTGA MGGNNRHKKTHSSFSIFSFFKSKRARKGDHCDDEIARSSKVWPSDEDKAHRWVGEPGIDRKAKDYIDRIYRNRVLESERQTVTIHPNSTTPNM Homology
BLAST of Tan0003378 vs. NCBI nr
Match: KAA0035003.1 (hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa] >TYK02343.1 hypothetical protein E5676_scaffold155G00350 [Cucumis melo var. makuwa]) HSP 1 Score: 153.7 bits (387), Expect = 7.9e-34 Identity = 75/99 (75.76%), Postives = 82/99 (82.83%), Query Frame = 0
BLAST of Tan0003378 vs. NCBI nr
Match: KGN45869.1 (hypothetical protein Csa_005516 [Cucumis sativus]) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33 Identity = 75/99 (75.76%), Postives = 80/99 (80.81%), Query Frame = 0
BLAST of Tan0003378 vs. NCBI nr
Match: KAG6592308.1 (hypothetical protein SDJN03_14654, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 149.1 bits (375), Expect = 1.9e-32 Identity = 73/94 (77.66%), Postives = 79/94 (84.04%), Query Frame = 0
BLAST of Tan0003378 vs. NCBI nr
Match: KGN45870.1 (hypothetical protein Csa_004960 [Cucumis sativus]) HSP 1 Score: 148.7 bits (374), Expect = 2.5e-32 Identity = 74/97 (76.29%), Postives = 79/97 (81.44%), Query Frame = 0
BLAST of Tan0003378 vs. NCBI nr
Match: KAG6592306.1 (hypothetical protein SDJN03_14652, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 146.7 bits (369), Expect = 9.7e-32 Identity = 73/97 (75.26%), Postives = 78/97 (80.41%), Query Frame = 0
BLAST of Tan0003378 vs. ExPASy TrEMBL
Match: A0A5A7SWT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00350 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.8e-34 Identity = 75/99 (75.76%), Postives = 82/99 (82.83%), Query Frame = 0
BLAST of Tan0003378 vs. ExPASy TrEMBL
Match: A0A0A0KAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014890 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 6.5e-34 Identity = 75/99 (75.76%), Postives = 80/99 (80.81%), Query Frame = 0
BLAST of Tan0003378 vs. ExPASy TrEMBL
Match: A0A0A0K7Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014900 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.2e-32 Identity = 74/97 (76.29%), Postives = 79/97 (81.44%), Query Frame = 0
BLAST of Tan0003378 vs. ExPASy TrEMBL
Match: A0A0A0KBW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014870 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.1e-32 Identity = 74/97 (76.29%), Postives = 79/97 (81.44%), Query Frame = 0
BLAST of Tan0003378 vs. ExPASy TrEMBL
Match: A0A0A0K8W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G016905 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 8.8e-31 Identity = 70/98 (71.43%), Postives = 80/98 (81.63%), Query Frame = 0
BLAST of Tan0003378 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 6.3e-13 Identity = 43/87 (49.43%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of Tan0003378 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 5.5e-09 Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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