Tan0003195 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGGGATGATGGTTGGCGTGGGTACAAGCGGAAAAAGAATGGTTAGATTGGAAAGAAAAGTGAGCATGTTGATGAAAGCGGTCAAAGAGAGAGATTATGAAATTGTCTCTCAAAAGAATCACATAGAAAGTCATGATGTTGTTGAATCGAGTCACACATTTGTCGTAAAGAGTAAGACAAGGGAAAGACTGACATGCAAGAAAGTCAGCCTCAACATTCCACTTCTATTGCTTCAATGCCCGTCCAACAACTTCAAGATATGA ATGTTTGGGATGATGGTTGGCGTGGGTACAAGCGGAAAAAGAATGGTTAGATTGGAAAGAAAAGTGAGCATGTTGATGAAAGCGGTCAAAGAGAGAGATTATGAAATTGTCTCTCAAAAGAATCACATAGAAAGTCATGATGTTGTTGAATCGAGTCACACATTTGTCGTAAAGAGTAAGACAAGGGAAAGACTGACATGCAAGAAAGTCAGCCTCAACATTCCACTTCTATTGCTTCAATGCCCGTCCAACAACTTCAAGATATGA ATGTTTGGGATGATGGTTGGCGTGGGTACAAGCGGAAAAAGAATGGTTAGATTGGAAAGAAAAGTGAGCATGTTGATGAAAGCGGTCAAAGAGAGAGATTATGAAATTGTCTCTCAAAAGAATCACATAGAAAGTCATGATGTTGTTGAATCGAGTCACACATTTGTCGTAAAGAGTAAGACAAGGGAAAGACTGACATGCAAGAAAGTCAGCCTCAACATTCCACTTCTATTGCTTCAATGCCCGTCCAACAACTTCAAGATATGA MFGMMVGVGTSGKRMVRLERKVSMLMKAVKERDYEIVSQKNHIESHDVVESSHTFVVKSKTRERLTCKKVSLNIPLLLLQCPSNNFKI Homology
BLAST of Tan0003195 vs. NCBI nr
Match: KAA0068081.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26065.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 74.7 bits (182), Expect = 4.4e-10 Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 0
BLAST of Tan0003195 vs. NCBI nr
Match: KAA0036729.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 72.8 bits (177), Expect = 1.7e-09 Identity = 37/59 (62.71%), Postives = 44/59 (74.58%), Query Frame = 0
BLAST of Tan0003195 vs. NCBI nr
Match: TYK07338.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 72.4 bits (176), Expect = 2.2e-09 Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = 0
BLAST of Tan0003195 vs. NCBI nr
Match: TYK13602.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 71.2 bits (173), Expect = 4.9e-09 Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of Tan0003195 vs. NCBI nr
Match: KAA0035918.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK19070.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 71.2 bits (173), Expect = 4.9e-09 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of Tan0003195 vs. ExPASy TrEMBL
Match: A0A5A7VR36 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00210 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.1e-10 Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 0
BLAST of Tan0003195 vs. ExPASy TrEMBL
Match: A0A5A7T5T3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1244G00140 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 8.1e-10 Identity = 37/59 (62.71%), Postives = 44/59 (74.58%), Query Frame = 0
BLAST of Tan0003195 vs. ExPASy TrEMBL
Match: A0A5D3C857 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00540 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.1e-09 Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = 0
BLAST of Tan0003195 vs. ExPASy TrEMBL
Match: A0A5A7SZB7 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00330 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.4e-09 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of Tan0003195 vs. ExPASy TrEMBL
Match: A0A5A7TQZ3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005340 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.4e-09 Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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