Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTAGTGAAGTGATCCCAAAATTAGAAATGAAAACTTATGCCATTGTTCTCATAACTATCGGATCAGTGATAGCCGCTGCAATGGTTTTGTGTTGTCTTTGTAAATATGGGGGTCGTAAAAAGAAGAAAACAAGAACACAAACATATATAGCTAATGCTCCAAGGCCAACGCCGCCGCCTCAACGGATGAACCATGATCTTGAACGCGGCCATGACACTCAAAGAAGTGAAATTAAGAACGGTGGGATGACGATTCTGGCCGGAGCCGGTGCTGGTTTAGCTACTGCAGCTGTGGTTACTACTTTTAGCAATGAAGGAGGAGGGGACGATGGAGGAGATGGTGGCGGAGGTGATGGTGATGGCGGTGGTGGCGGCTGCGGTGGCGGTGGCTGCGGTGGTGGCGGGTGTGGTGGCGGCGGTTGTGGTGGCGGGTGTGGAGGTTGA
mRNA sequence
TATTAGTGAAGTGATCCCAAAATTAGAAATGAAAACTTATGCCATTGTTCTCATAACTATCGGATCAGTGATAGCCGCTGCAATGGTTTTGTGTTGTCTTTGTAAATATGGGGGTCGTAAAAAGAAGAAAACAAGAACACAAACATATATAGCTAATGCTCCAAGGCCAACGCCGCCGCCTCAACGGATGAACCATGATCTTGAACGCGGCCATGACACTCAAAGAAGTGAAATTAAGAACGGTGGGATGACGATTCTGGCCGGAGCCGGTGCTGGTTTAGCTACTGCAGCTGTGGTTACTACTTTTAGCAATGAAGGAGGAGGGGACGATGGAGGAGATGGTGGCGGAGGTGATGGTGATGGCGGTGGTGGCGGCTGCGGTGGCGGTGGCTGCGGTGGTGGCGGGTGTGGTGGCGGCGGTTGTGGTGGCGGGTGTGGAGGTTGA
Coding sequence (CDS)
ATGAAAACTTATGCCATTGTTCTCATAACTATCGGATCAGTGATAGCCGCTGCAATGGTTTTGTGTTGTCTTTGTAAATATGGGGGTCGTAAAAAGAAGAAAACAAGAACACAAACATATATAGCTAATGCTCCAAGGCCAACGCCGCCGCCTCAACGGATGAACCATGATCTTGAACGCGGCCATGACACTCAAAGAAGTGAAATTAAGAACGGTGGGATGACGATTCTGGCCGGAGCCGGTGCTGGTTTAGCTACTGCAGCTGTGGTTACTACTTTTAGCAATGAAGGAGGAGGGGACGATGGAGGAGATGGTGGCGGAGGTGATGGTGATGGCGGTGGTGGCGGCTGCGGTGGCGGTGGCTGCGGTGGTGGCGGGTGTGGTGGCGGCGGTTGTGGTGGCGGGTGTGGAGGTTGA
Protein sequence
MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLERGHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGDDGGDGGGGDGDGGGGGCGGGGCGGGGCGGGGCGGGCGG
Homology
BLAST of Tan0003164 vs. NCBI nr
Match:
KAG6577050.1 (hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 112.5 bits (280), Expect = 3.0e-21
Identity = 95/139 (68.35%), Postives = 105/139 (75.54%), Query Frame = 0
Query: 1 MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLER 60
M+TYAIVLIT G VIA+A++L C+C YGGRKKKK TY ++A RPTP P R DLE
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSR---DLEL 60
Query: 61 GHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGDDGGDGG-GGDGDGGGGGCGG 120
G E KNGGMTILAGA AGLATAAVVT+ +N+GGG GG GG G GDGGGGGC G
Sbjct: 61 G------EAKNGGMTILAGAAAGLATAAVVTSLTNDGGGGGGGGGGEEGGGDGGGGGC-G 120
Query: 121 GGCGGGGCGGGGCGGGCGG 139
GGC GGGC GGGCGGGCGG
Sbjct: 121 GGC-GGGC-GGGCGGGCGG 127
BLAST of Tan0003164 vs. NCBI nr
Match:
XP_022985127.1 (glycine-rich protein 5-like [Cucurbita maxima])
HSP 1 Score: 111.7 bits (278), Expect = 5.1e-21
Identity = 96/141 (68.09%), Postives = 105/141 (74.47%), Query Frame = 0
Query: 1 MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLER 60
M+TYAIVLIT G VIA+A++L C+C YGGRKKKKT TY ++A RPTP P R DLE
Sbjct: 1 MRTYAIVLITSGCVIASAVILWCVCSYGGRKKKKTAPPTYTSSALRPTPRPSR---DLEL 60
Query: 61 GHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGDDGGDGGGGDGDGGGGGCGGG 120
G E KNGGMTILAGA AGLATAAVVT+ SN+GG GG GGG GD GGGG GGG
Sbjct: 61 G------EAKNGGMTILAGAAAGLATAAVVTSLSNDGG---GGGGGGEGGDDGGGGDGGG 120
Query: 121 GCG---GGGCGGGGCGGGCGG 139
GCG GGGC GGGCGGGCGG
Sbjct: 121 GCGGGCGGGC-GGGCGGGCGG 128
BLAST of Tan0003164 vs. NCBI nr
Match:
XP_023552868.1 (glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 110.2 bits (274), Expect = 1.5e-20
Identity = 93/138 (67.39%), Postives = 103/138 (74.64%), Query Frame = 0
Query: 1 MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLER 60
M+TYAIVLIT G VIA+A++L C+C YGGRKKKK TY ++A RPTP P R DLE
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSR---DLEL 60
Query: 61 GHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGDDGGDGGGGDGDGGGGGCGGG 120
G E KNGGMTILAGA AGLATAAVVT+ SN+GGG GG+ GGGDG GG GG G G
Sbjct: 61 G------EAKNGGMTILAGAAAGLATAAVVTSLSNDGGGGGGGEEGGGDGGGGDGGGGCG 120
Query: 121 GCGGGGCGGGGCGGGCGG 139
G GGGC GGGCGGGCGG
Sbjct: 121 GGCGGGC-GGGCGGGCGG 128
BLAST of Tan0003164 vs. NCBI nr
Match:
XP_022931328.1 (glycine-rich protein 5-like [Cucurbita moschata])
HSP 1 Score: 104.8 bits (260), Expect = 6.2e-19
Identity = 92/139 (66.19%), Postives = 103/139 (74.10%), Query Frame = 0
Query: 1 MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLER 60
M+TYAIVLIT G VIA+A++L C+C YGGRKKKK TY ++A RPTP P R DLE
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSR---DLEL 60
Query: 61 GHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNE-GGGDDGGDGGGGDGDGGGGGCGG 120
G E KNGGMTILAGA AGLATAAVVT+ +N+ GGG GG+ GGGDG GG GG G
Sbjct: 61 G------EAKNGGMTILAGAAAGLATAAVVTSLTNDGGGGGGGGEEGGGDGSGGDGGGGC 120
Query: 121 GGCGGGGCGGGGCGGGCGG 139
GG GGGC GGGCGGGCGG
Sbjct: 121 GGGCGGGC-GGGCGGGCGG 129
BLAST of Tan0003164 vs. NCBI nr
Match:
PIN16641.1 (hypothetical protein CDL12_10707 [Handroanthus impetiginosus])
HSP 1 Score: 98.2 bits (243), Expect = 5.8e-17
Identity = 80/140 (57.14%), Postives = 95/140 (67.86%), Query Frame = 0
Query: 1 MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLER 60
MK YA+VLI +GS+ A ++LCCLC GRKKK+ A APRP+ PPQ + D+E+
Sbjct: 1 MKAYAVVLIVLGSIAAVILLLCCLCN-NGRKKKRPAAAPNSAAAPRPSLPPQPVYRDVEK 60
Query: 61 GHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGDDGGDGGGGDGDGGGGGCGGG 120
G +++ S +KNGGM +L A ATA SN GGG GG GGGGDG GGGGG GGG
Sbjct: 61 GENSKSSGVKNGGMVVLGAGAAIAATAVTAAVISNSGGGGCGGGGGGGDGGGGGGGDGGG 120
Query: 121 GCGGGGCGGGGCG--GGCGG 139
CGGGGCGGGGCG GGCGG
Sbjct: 121 CCGGGGCGGGGCGGCGGCGG 139
BLAST of Tan0003164 vs. ExPASy TrEMBL
Match:
A0A6J1J409 (glycine-rich protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111483210 PE=4 SV=1)
HSP 1 Score: 111.7 bits (278), Expect = 2.5e-21
Identity = 96/141 (68.09%), Postives = 105/141 (74.47%), Query Frame = 0
Query: 1 MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLER 60
M+TYAIVLIT G VIA+A++L C+C YGGRKKKKT TY ++A RPTP P R DLE
Sbjct: 1 MRTYAIVLITSGCVIASAVILWCVCSYGGRKKKKTAPPTYTSSALRPTPRPSR---DLEL 60
Query: 61 GHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGDDGGDGGGGDGDGGGGGCGGG 120
G E KNGGMTILAGA AGLATAAVVT+ SN+GG GG GGG GD GGGG GGG
Sbjct: 61 G------EAKNGGMTILAGAAAGLATAAVVTSLSNDGG---GGGGGGEGGDDGGGGDGGG 120
Query: 121 GCG---GGGCGGGGCGGGCGG 139
GCG GGGC GGGCGGGCGG
Sbjct: 121 GCGGGCGGGC-GGGCGGGCGG 128
BLAST of Tan0003164 vs. ExPASy TrEMBL
Match:
A0A6J1EY84 (glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437551 PE=4 SV=1)
HSP 1 Score: 104.8 bits (260), Expect = 3.0e-19
Identity = 92/139 (66.19%), Postives = 103/139 (74.10%), Query Frame = 0
Query: 1 MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLER 60
M+TYAIVLIT G VIA+A++L C+C YGGRKKKK TY ++A RPTP P R DLE
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSR---DLEL 60
Query: 61 GHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNE-GGGDDGGDGGGGDGDGGGGGCGG 120
G E KNGGMTILAGA AGLATAAVVT+ +N+ GGG GG+ GGGDG GG GG G
Sbjct: 61 G------EAKNGGMTILAGAAAGLATAAVVTSLTNDGGGGGGGGEEGGGDGSGGDGGGGC 120
Query: 121 GGCGGGGCGGGGCGGGCGG 139
GG GGGC GGGCGGGCGG
Sbjct: 121 GGGCGGGC-GGGCGGGCGG 129
BLAST of Tan0003164 vs. ExPASy TrEMBL
Match:
A0A2G9HGH5 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10707 PE=4 SV=1)
HSP 1 Score: 98.2 bits (243), Expect = 2.8e-17
Identity = 80/140 (57.14%), Postives = 95/140 (67.86%), Query Frame = 0
Query: 1 MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLER 60
MK YA+VLI +GS+ A ++LCCLC GRKKK+ A APRP+ PPQ + D+E+
Sbjct: 1 MKAYAVVLIVLGSIAAVILLLCCLCN-NGRKKKRPAAAPNSAAAPRPSLPPQPVYRDVEK 60
Query: 61 GHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGDDGGDGGGGDGDGGGGGCGGG 120
G +++ S +KNGGM +L A ATA SN GGG GG GGGGDG GGGGG GGG
Sbjct: 61 GENSKSSGVKNGGMVVLGAGAAIAATAVTAAVISNSGGGGCGGGGGGGDGGGGGGGDGGG 120
Query: 121 GCGGGGCGGGGCG--GGCGG 139
CGGGGCGGGGCG GGCGG
Sbjct: 121 CCGGGGCGGGGCGGCGGCGG 139
BLAST of Tan0003164 vs. ExPASy TrEMBL
Match:
A0A0A0KVE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G081280 PE=4 SV=1)
HSP 1 Score: 94.4 bits (233), Expect = 4.1e-16
Identity = 86/137 (62.77%), Postives = 96/137 (70.07%), Query Frame = 0
Query: 1 MKTYAIVLITIGSVIAAAMVLCCLCKYGGRKKKKTRTQTYIANAPRPTPPPQRMNHDLER 60
MKTYAIVLI GSVI A M+L C+CK+G +KKKT T N P+ TP + N D+ER
Sbjct: 1 MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITY----NMPKRTP---QRNLDIER 60
Query: 61 GHDTQRSEIKNGGMTILAGAGAGLATAAVVTTFSNEGGGDDGGDGGGGDGDGGGGGCGGG 120
G + + NGGMTIL GA AGLATAAVVTT S+ GGG G G GGDGDGGGGG GG
Sbjct: 61 GQLPKNN--NNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSGSGGDGDGGGGGGCGG 120
Query: 121 GCGGGGCGGGGCGGGCG 138
GC GGC GGGCGGGCG
Sbjct: 121 GC--GGC-GGGCGGGCG 125
BLAST of Tan0003164 vs. ExPASy TrEMBL
Match:
A0A1U8HEI6 (loricrin-like OS=Capsicum annuum OX=4072 GN=LOC107879282 PE=4 SV=1)
HSP 1 Score: 82.4 bits (202), Expect = 1.6e-12
Identity = 79/143 (55.24%), Postives = 94/143 (65.73%), Query Frame = 0
Query: 1 MKTYAIVLITIGSVIAA-AMVLCCLCKYGGRKKK-KTRTQTYIANAPRPTPP-PQRMNHD 60
MK YAI LI GSV AA ++ CC CK G +KK T+ +P P PP P ++N D
Sbjct: 1 MKAYAIALIVCGSVAAALVLIFCCFCKSGRKKKSYPVSTRNVTGGSPAPPPPQPLQVNRD 60
Query: 61 LERGHDTQRSE--IKNGGMTILAGAGAGLATAAVVTTFSNEGGGDDGGDGGGGDGDGGGG 120
+E+G +S I++GGM +L A A ATAAVVT+ + GGG GG GGGGDG G G
Sbjct: 61 VEKGEIKAKSNTAIRDGGMVVLGAAAATAATAAVVTS-AYSGGGGCGGGGGGGDGGGASG 120
Query: 121 GCGGGGCGGGGCGGGGCGGGCGG 139
GCGGGGCGGGGCGGGGC GGCGG
Sbjct: 121 GCGGGGCGGGGCGGGGC-GGCGG 141
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6577050.1 | 3.0e-21 | 68.35 | hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022985127.1 | 5.1e-21 | 68.09 | glycine-rich protein 5-like [Cucurbita maxima] | [more] |
XP_023552868.1 | 1.5e-20 | 67.39 | glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022931328.1 | 6.2e-19 | 66.19 | glycine-rich protein 5-like [Cucurbita moschata] | [more] |
PIN16641.1 | 5.8e-17 | 57.14 | hypothetical protein CDL12_10707 [Handroanthus impetiginosus] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1J409 | 2.5e-21 | 68.09 | glycine-rich protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111483210 PE=4 SV=... | [more] |
A0A6J1EY84 | 3.0e-19 | 66.19 | glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437551 PE=4 S... | [more] |
A0A2G9HGH5 | 2.8e-17 | 57.14 | Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10707 P... | [more] |
A0A0A0KVE1 | 4.1e-16 | 62.77 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G081280 PE=4 SV=1 | [more] |
A0A1U8HEI6 | 1.6e-12 | 55.24 | loricrin-like OS=Capsicum annuum OX=4072 GN=LOC107879282 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |