Tan0002973 (gene) Snake gourd v1

Overview


Name	Tan0002973
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG02: 87951061 .. 87956359 (-)
RNA-Seq Expression	Tan0002973
Synteny	Tan0002973

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCATCTGTTTCAATCCATAAGTTATGAAATCCCAAATTACCAGCTATCTCCATTCCCCTCAGAAGAGCCAGTGCTTCAGCTGAGAGAGGATCAATGCTACCCGATAGTTTCTCCGATCTTGCTGCAACCATTCTTCCATTGGAGTCTCGAATGACTGCGCCAAGTCCAGTGATCTTCTTTGAATCAGGTAGAGTTTCTGAAATGATTGAATTTCCATCTTTCATTTTGTAATTTTCTATATAGTTAATGATTCAGGTCACTTTACTATCAACGTCTGGTATGGCTTTGTTTCTATCTGACCAAATTGCCCAGCTGCATACACAGAGGAGCTTGCCTTCTGTTTCATCTAGCTTTTCTAACCCCCGAATCAGGAGATCTGAGGTTGTTAATCGCATATGGATGCTACCCGAGATCTTTGGTAAGATGCTATTCCAAATCTTCTTAGATCTCTAAGATTGGAAAATGGCATGAGTTTCTGTTTCTCCTTCTTTTCCATATAGACTGCACCATGGATCCATAGACACTTTACGTTTGTGGGGGTTATGCTTTGTAGGTAGACTATCGTGAAAAAGTCTCCATATAAATATTTTGATTTTAGCTGGAATGTCTAAGGTCCATAGGTTTTTCCACCATTTATTTAGCATGGTATTGTTAGAACTTGACTCTTCTTCTTTTTCCCTATTAATGTATACCTTATATGCACTTTTAGTGGAAAAGTTTCCATCCTTCGTGTAATGTCATATCCATCTATCTGGTAGTGATGTTTTGCAAATAGGTATAGTTTGGATGATTTGAATGTCATCTTCCTGAAGGATTGACATCATTTTATTGCTATCCCATTTGCCGGAATTGGTAATAATATCACTAACTTTCATGGATTTGGATACCTCAGTAGGTCTGGACAAAGGTCTGAAGGTAGAAGGTTGAGGAATTCATAGATGTTCAAATATAAGGGTGTCTGCTCCTCAGGTTGTGTCATATATATTTCTTCATCTAAGTCACCATTTAGGAAAGCCGTTTTTACATCCATTTGATGTATTAACAAGCCACGAATTGTTGCAAATGCAATCATTGCTCTAATGGTAGCTATTTTAGTCACAGGAGAATAAGTATCAAAGTATCTATACCTTATTTGTGTGTATATCCTACAACCACTAATCTAGCCTTGAATTTTTCAATTGATCCATCAGGTCTAATTTTCTTTTTGAAAATCCATTTGCATTTAATAGGCTTATTACCTTTAGGCAAATCTACCAAGTCCCATGTTTGATTCATAAGCAAGGAATCTAATTCACTTTTAATTGCTTCTTTCCAAAACTTGGAGTCTATTGAGCATAAGGCCTCTTGATATGATTTAGGTTCCTCATCTATTAAGAACATGCAAGCAAATTGATTGTCTATCTTATCTGAATTTTCTACTAAGAAAATAGTTAAAAAATCAAATCCAAAATTTTTATCAATTTTTTGTCTTTTACTTCTTCTAGGCTCATGCAAACTATCAAAAGCAGATGGTAATTGCATAGTTATCTGGTCATTGACTGTGATGTTGACATTCTTAGTATTAGTAGGTTCACTAGCTACTTTAACCATGGGAAAAATATTTTCAAAGAATTCAGCATCTCTATATTCACAAATTGATTTATCATTTAAGCACATAAACCTATATGCAGCACTATTATGAGCATAACCAATAAAAACACAGTCAAAAGTTTTAGATCCAACCGTAGGTTTCTTGAATGATAGATATGTCACTTTAGCTAAGCATCCCCACACTCTCAAGTAGCTTAGATTAGGCGAATAACCCTTCCACAATTCGTATGGTGTCTTATCCAACCTTTTGTGAGGAACCCTGCTAAGAATGAAACATGCAGAAAGCACAGCTTCCCCCCACAAATTGTCAGATAACCCAAAACTTAATAACATAGCATTCATCATTTCTTTCAGTGTTCTATTCTTACGTTCAGCTATGCCATTTTGTTGAGGAGAGTATGGTGGAGTAGTTTCATGTATAATTCCATTTAATTCACAAAATTCTTTAAGAAAATTATCACTATATTCACCACCTCTGTCGGATCTTAACCTTTTTATCCTTTTATCCAACTGATTTTCTACTTCAGCTTTAAATTTTAAAAACATGCTACTTGCCTCATCTTTAGATTTTAAAAGATAATTTTTTGTATATCTAGAAAAATCATCAACGAACGATATATAATAGTTTTTACCACCTCTGCTTGTAGTATTTTTGAAATCAGCCAAATCAGAATGGATTAGTTCAAGTAACTCTGTACTTCTAGTTGTGACAGGTTTAAAAGGTTTCTTTGTGAATTTGGCTTCTACACATACATAACATTTTCCAGTTTAATGTGATTCTGATGCATTAATAAGGTTTAGATTCTTCAACCTTTTAACTGATGCAACGTTTACATATCCTAGTCTAGCATGCCATATGTCAATAGATTCAACGATATAAGCAAACGAGAGGTACTTTCATTCATCAATGCACCACTAACAACCGTGTTCAGAACAAATAAACCATCAGCTAGATAACCATTACCAACAAAGTCACCATTTTTGGTGATGATAACCTTGTCAGCCTCAAACACAATTCTAAGCCCAGCCTTGTTCAACAGACTTCCAGACACCAAGTTCCTACGTCGTGAAGGAACATATAAAACATCACTTAATGATAAAGTTTTTCCATAGGTAAGTTTTAAGAGAACCTTTCTTTTTCCAAGTACTCCAGCAGTTGCAGAGTTCCCCATGAACACACATTCACCATCAGCACAATCTTGGTAGTCATGGAACAACTCTCGATTTAAACAAAAATGTTTTGAAGCTCCAATGTCCAGAATCCAGTCAGACTTACTCTCGATTTGAACAAAAATGTCTTCTACTACGACCACAAAGAAAGAATGATTTCTTCTTGTTCAATGAGGTTGGCTTTGTGGAATGAGTTTTGATCCGCTTTCCTTTCTTCCGTTTGCACTTTGGTATGATTTGTGTCCAGGTTTTCCGCACACATAACAGATCAACTTAGACTTCTCAATTTTTCCATTGGAAGCCCTAAACTGATGCCCCTTTTGTGTTCTGTCTTTGGCAGTTTGTTTTCCTTTGTTTTTGAACCTGTCTTTTAAGGCAACAGAAGACTCAACAAGGTTAACATTAACAGAGTTCAGAGATTGAGAATTCATCTTATCTTTCTGCCTATTGGCTTCTTCAGTGCGCATGTGACAGATCAGTTCTTGCAAGGTCAGGTCCTTCTTTTTGTGTTTCAGGTGGTTGCGATAGTCACTCCAGATGGAGAGAATTTTTCGAGCAGTACGTTCGCTTGAAGAATTTCGCACATCTTCATGCCTTCAGTCAGTACATTAGCTACCAGATTTTCATATTCACGAACTTGCTCCATGACTAGTTTGTCATTTGTCATCTGAAATTGCAACCATTTTCCAACAACGTGTTTTCTTCTACCTGCATCATCTTTACCATATCTAGATTCCAGAATATCCCATATTACCTTTGCAGATTTCTGAACGACAAAGAGATCGAACAGAGAATTAGTCATGTGATTCAGGAGATGGTCGCGGACCGTCTTGTTATCTTTCTCGAACTTGTCATCTCCATCAGTATCCTTTTTCGATTGGGCAGAATCAATATGGACAGTTGGATCAACCTCAGCAACAATGATGGAACTTCTCGGATCTGCCGATGTTGTAACAGTAGGCCTCTGTGATTTGTCGGACAGTAGAACATAATCGACCTCCAACTGTTCGAAGAAGATCAAGAGTTTCTGAGACCAACGTCGGTAGTTTGATCCGTCAAGTGGTTCTAATTTAGACAGATCTGGCAGCACCTTTCCCGATCTGATCATCGACATAGTAAAAGATAAATTGCTTTCAAATTGTTACCTAGGACGATGATTAGAAAGTTGTTGTGTCGTGGAAAACCACTGCCTTGAAAGCAATTTCGGCACGACCATGGTGCTAAATCGCTACAGTCGGTTGCTCCCCAAGGTTAACACAACACCCAATCGTTGCGTGCACTCGCCAATCAAGGGTTGGAATTAAGAAGAACAAAGCTTGGGAAAATCGAGTACAAAAACTAGATTCGAAAAACTACAATCCACAATTCTGTATATTTTTCATTCAGATCTGAAGATAAACTAAAAGGAGAAGAGAGAGACGTTTTTTTCATATCTAGATCTGGATCGCGCATTTTCCTGAACTCGAACCCGAACGTCCGACCAGACGGACGACGGTGGTGGCGTGCGTGTGGGGAGATGTTTTGTTACCACTACATCCACTTTTTACCAATTTCCATGTGAGCCAATGTATAAAAATCACTCACATTTCCACAATCTTTCCAATGTGGGACAAACACTCTCATTCACATATGGGACAAACACTCCCATTCTTTATGTAACTTTTAGGCCTTAGGCTCAAGTCATTCTCCACATACACATATAGGTAAAATGGTAGAGTGAGTTGCTAATAGATAATTTTTCTTTTTTTCTTTTTCCTTTAAAAAATTAAAGTTGAAGTTGGAATATTATCACTTTACAAATTAATGTACCAATTTGTTTAAAGCTACCTACAACAGTTTCTAGAGTATAATGTGTGGAATATATCAGATACTCTGGAGCCAATTACAAAAAGACAATGTCTATGGAGACCTCTAGCATTCCCAAAACTTCAAATTAAATACAGATGCAACAATTTTCAGAAATGAAAATCAGTGTGGTGTGAGTGCAGTGATACGAGTTGAGAAGGGAAATGTGATGATTACCTTGATCAAACCGGTTTCGTGGATTACTGATGTTGTAACAGCCGAAGCAATTGCGGTTCGAGAAGCTTTAACACTGGCTAATGAAATGGGGTTTCATCATCTAGAAGTTGAAACAGAGTCTTCCCTAGTGATTAATCTCATTCACAAAAAATCCCAAAATCAATCAGAGTTAGGGCAGATTATCGAAGAAATAAGGTAGTTGGTAAGGAAGATGATAAAATGTTCCTTCTCCTGGTGTGATCGAAAGGCAAACTCTCTGGCGTAATCTCTGGCTAGACATGCAAAAGATTTCTCTGAAGAGGCGATGTGGATGGAAGAGATCCCTGAGTTCTCGAGAGCTTTCTTCGAGGCTGAGAGAAATGTAGAAGAAACCTGTTGTTAAGCAGAGTTTTCATGTTTTGTTTTCTTTATTTCGTTATTATTCAAAAAAAAAAATATGTACCAGTTCGTTTATAATTTTTATGTCAATATTTATTTATAATCATTATTATTCTATAAAACTATAATCAATCCTAC

mRNA sequence

TGCATCTGTTTCAATCCATAAGTTATGAAATCCCAAATTACCAGCTATCTCCATTCCCCTCAGAAGAGCCAGTGCTTCAGCTGAGAGAGGATCAATGCTACCCGATAGTTTCTCCGATCTTGCTGCAACCATTCTTCCATTGGAGTCTCGAATGACTGCGCCAAGTCCAGTGATCTTCTTTGAATCAGGTCACTTTACTATCAACGTCTGGTATGGCTTTGTTTCTATCTGACCAAATTGCCCAGCTGCATACACAGAGGAGCTTGCCTTCTGTTTCATCTAGCTTTTCTAACCCCCGAATCAGGAGATCTGAGGTTGTTAATCGCATATGGATGCTACCCGAGATCTTTGATACTCTGGAGCCAATTACAAAAAGACAATGTCTATGGAGACCTCTAGCATTCCCAAAACTTCAAATTAAATACAGATGCAACAATTTTCAGAAATGAAAATCAGTGTGGTGTGAGTGCAGTGATACGAGTTGAGAAGGGAAATGTGATGATTACCTTGATCAAACCGGTTTCGTGGATTACTGATGTTGTAACAGCCGAAGCAATTGCGGTTCGAGAAGCTTTAACACTGGCTAATGAAATGGGGTTTCATCATCTAGAAGTTGAAACAGAGTCTTCCCTAGTGATTAATCTCATTCACAAAAAATCCCAAAATCAATCAGAGTTAGGGCAGATTATCGAAGAAATAAGGTAGTTGGTAAGGAAGATGATAAAATGTTCCTTCTCCTGGTGTGATCGAAAGGCAAACTCTCTGGCGTAATCTCTGGCTAGACATGCAAAAGATTTCTCTGAAGAGGCGATGTGGATGGAAGAGATCCCTGAGTTCTCGAGAGCTTTCTTCGAGGCTGAGAGAAATGTAGAAGAAACCTGTTGTTAAGCAGAGTTTTCATGTTTTGTTTTCTTTATTTCGTTATTATTCAAAAAAAAAAATATGTACCAGTTCGTTTATAATTTTTATGTCAATATTTATTTATAATCATTATTATTCTATAAAACTATAATCAATCCTAC

Coding sequence (CDS)

ATGGCTTTGTTTCTATCTGACCAAATTGCCCAGCTGCATACACAGAGGAGCTTGCCTTCTGTTTCATCTAGCTTTTCTAACCCCCGAATCAGGAGATCTGAGGTTGTTAATCGCATATGGATGCTACCCGAGATCTTTGATACTCTGGAGCCAATTACAAAAAGACAATGTCTATGGAGACCTCTAGCATTCCCAAAACTTCAAATTAAATACAGATGCAACAATTTTCAGAAATGA

Protein sequence

MALFLSDQIAQLHTQRSLPSVSSSFSNPRIRRSEVVNRIWMLPEIFDTLEPITKRQCLWRPLAFPKLQIKYRCNNFQK

Homology

The following BLAST results are available for this feature:

BLAST of Tan0002973 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0002973 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0002973 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0002973 vs.


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0002973.1	Tan0002973.1	mRNA
Tan0002973.2	Tan0002973.2	mRNA
Tan0002973.3	Tan0002973.3	mRNA