Tan0002871 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTTTTGGTTGAAGGGAAATGGAATATATTCACTAATATGAGCACTAAGGAAACCATTGTTGCAGCTGACAAGTACAGAGCTTTCTTGGATTTGGAGGATTCTACTATTCAATGGAGGCATGGAAAACCCCCATCTTTTCAAACTGTTAACAAGCTCTTTGAAGATGGCAGAACCAAGGTTTTTTTTTCTTCAATATACTTTACTTTGATAATTATTTGATTTTTTTATTTTTGGTTTTTAAAACTTATTCTTGTTTTCTCACTATTTTCTCATAATAGTCTTCATCTATATCCTACTATGATTTCCATCTATTTTAAGAAAACACTAGAATTCTTAGCTAAATTTAAAAAATAAAACCAAGTTTTTAGAAACTATTTTTTTTTAGTTTTCAAAACTTGGGTTGGTTGTTGAAAACACGTCTAAAAAATAAACATAAAAACATGAAAAGTCATAGTTGAAAGTAGTAATTATTAAAGGATTAATTTTCAAAAACCAAAAATAAAAAACCAAATGGTTATCAAATAGGGTCTTAATTAGTTTTTCGTTTTTGAAAATTAAGCCTAAAATACTATTTCTACTAATTGATTTATATGTTTCTTAATCTATATTGTACCTATGTTTTCAAAAACCATGCTATGTTTTGAAAACTAGAAAAAGCAGTGTTCAAAAACTTGTTTTTGTTTTTGAAATTTTGTTAGAAACTTAAATGATATCTCAAGAAAGATAGAAATCATTGTAAAAACAAAAAACCAAATGGTTATCAAACGGGCTTTAATTATTATTATTATTGTATTTTTTTACTTTTCCTCTCTCTCATATCATTTGTTACTTAATTTGTTTTTGTTAATGGTAGGTCTGGCCAAAAGGATCTCTGGAAGAAACATTACAGAATATTGTAAAATCATTGCATATGGAGATTTCCCACAAGACTAGATTAAAGGATTTCAAAACCATAAACCCTCAGAAATTCAATGTTTTTGTCAATGGTATAGTACACTTTGTTTGTTTGCTACAACTTTATGAGAAATGATAAACGTAATTTGTTTTTGTATCCAATCGTTATTAGGAAACAATCATATGAATCTATATCCGATAGTTACAGTCACGTTGTGGCGGCCTTATTGAAGAATTTGTCCTATGATATTAATGTAGGGAGAGAGGGACAATCAGGTGAAGAAATACTAAGGCTGGGAGCCTTCAATGTATTGCTGAAGAATTCTCTACCAAAAGAGTACCACTATTTTAAAGCAGATGAAGAGAAATATGAATCAACTTATGAAGCATTTAGGGCTTGTTTTCCAAGAGGGTTTGCATGGGAAATTATTGAGGTTTATTCAGGCCCTCCTTTGATTGCCTTCAAGTTTAGGCATTGGGGCTTCTTTGAAGGACCTTATAAAGATCATTCCCCAACTGGTGAATTGATTCAATTCTATGGCTTGGGAACTTTCAAGGTAAAGTTTGAAATCCAACCTACACTCAATTCAACTTCTCCATATAACTATGTGTACTGTGTAATATTTTTTTGAAAATATATTTCTGAGTGTTTTGGCCATAGCTTGAGCCCTCACAACTAATCAAATCCATAATTATTTGACCCTATTATATTTTAGGGGTGTTCAAAAAAACCCGATAACTCGAACAACCCAACTCGATGGTTATAAATTTATTTGAGTTGGGTTGGGTTCAAATAAATTAAAATGCATGGGTTGGGTTGGTTCGTGGGTTCGCCTAAAATTAATTTGGGTTGACCCGACCAACCCGAACTTATTATTAATTTTAACAATTATATTTTTACCTACCATACAACTACATATACATGTATTTAATTTATTTTTATTTTTATTTTATAATTATTTATTATTTAATAATTCTTAAAAATATATTTTTAAATCGTTAGGGTGTGTTTTTTCATAATATAAATTGAAACTAAGTGACTAATTTTAATTCAATCTTTGAAAAACAAAGAGTTTTTGTTTTAAATGATGACGATTTATTTAGAAGTTTTTTGGAATAATTGTAAATTTGTAATAGAATATCTAAGTTTTATGATTGTTATTTAGTATAAAGTCATTTGGAGTTCTTTAATTCTTAATTTTTTATATTTATATTAATTTTAAATTTAAAAAAAAGAAAAAAAACTAACCCGATGACCCAACCCAACCCGAAAATGTTGGGTTGGGTTACCCTCATGAATAAGGTTATTTGGGTTGGAAGAATGACCAACCCGAAAATTTGGGTTGGACAAAAAAAAATAACATAACCCGACTCAACCCGACTTATGTACACCCCTATTATATTTAATTTAGCAAAAAAAAAAAAAAAACTGTAAGACTATTAAATTTTAAATATGTGACTACCCATAGTTCTCATTGGTAGTTAAACTTGTCCATACATACATATATATATTTTATATAGTGGTCAGTACTATTATAATATTAATTTTTTGTCCACATGTCAACATTTTTATCGACATTTTCACATGCCCATGAGTTCGACATCGACATAAAGAAGTGAATCGACATTTCTATTAATATACCGTAAAATATAGATGAAATCTTAAAAAAATAGTTACAAAATATAATAATGTGAATACAATATTAAAATAAGTATTTTAACTTATTTAAACAATATAAAATGTTTGTTTATTACTTTAAATATTTTTTAATTTTAAGATTTTTTAAGAAATTATCCATCAACATCCCTATTTTATCAATATTTTTATCGATATTTTCAAATGAATTAACATTTTAAACATTAGTAGTATCTTCAAAACTATTAGTTAATTAATTAAAATACACCTGAATATTGTGTGCTTCAAAATTATTCTAAAAAACATTCAAATAGGTAGCTATGTGAAAATTATATTGAAATTAGAAATCATTTTTGAGGATTTTTTTTTTTTTATATTATTGTTTGAAAAGTTGGGTGAGTATATGATGATGTATATTTGCACAGGTAGATTCATCAATGAAGGTTGAAGAAGTTGATATCTACTATGATCCAGCTGAGTTATTTGGAGGTCTTTTAAATGGGAAAAAAACTGCTTCACAATCCAAAACCCAACACAACAATGACAAACATTTAGCTGATTCAGTTGCCACCTGCCCATTCTCCAAACTCAACATCTAGTTCTAAAAATGTTTTATATACATATATAACCTTCAATTAATATATTCTATGTATCCAATAATCTCTCTCAACATAAAAATCCTTGAAGAGAAACCAATTACTGGGTTTTTCTTAAGGCTTATGTTATCCACAATAAAGAACACTATCTCAGAC CTTTTTTTGGTTGAAGGGAAATGGAATATATTCACTAATATGAGCACTAAGGAAACCATTGTTGCAGCTGACAAGTACAGAGCTTTCTTGGATTTGGAGGATTCTACTATTCAATGGAGGCATGGAAAACCCCCATCTTTTCAAACTGTTAACAAGCTCTTTGAAGATGGCAGAACCAAGGTCTGGCCAAAAGGATCTCTGGAAGAAACATTACAGAATATTGTAAAATCATTGCATATGGAGATTTCCCACAAGACTAGATTAAAGGATTTCAAAACCATAAACCCTCAGAAATTCAATGTTTTTGTCAATGGGAGAGAGGGACAATCAGGTGAAGAAATACTAAGGCTGGGAGCCTTCAATGTATTGCTGAAGAATTCTCTACCAAAAGAGTACCACTATTTTAAAGCAGATGAAGAGAAATATGAATCAACTTATGAAGCATTTAGGGCTTGTTTTCCAAGAGGGTTTGCATGGGAAATTATTGAGGTTTATTCAGGCCCTCCTTTGATTGCCTTCAAGTTTAGGCATTGGGGCTTCTTTGAAGGACCTTATAAAGATCATTCCCCAACTGGTGAATTGATTCAATTCTATGGCTTGGGAACTTTCAAGGTTGAAGAAGTTGATATCTACTATGATCCAGCTGAGTTATTTGGAGGTCTTTTAAATGGGAAAAAAACTGCTTCACAATCCAAAACCCAACACAACAATGACAAACATTTAGCTGATTCAGTTGCCACCTGCCCATTCTCCAAACTCAACATCTAGTTCTAAAAATGTTTTATATACATATATAACCTTCAATTAATATATTCTATGTATCCAATAATCTCTCTCAACATAAAAATCCTTGAAGAGAAACCAATTACTGGGTTTTTCTTAAGGCTTATGTTATCCACAATAAAGAACACTATCTCAGAC ATGAGCACTAAGGAAACCATTGTTGCAGCTGACAAGTACAGAGCTTTCTTGGATTTGGAGGATTCTACTATTCAATGGAGGCATGGAAAACCCCCATCTTTTCAAACTGTTAACAAGCTCTTTGAAGATGGCAGAACCAAGGTCTGGCCAAAAGGATCTCTGGAAGAAACATTACAGAATATTGTAAAATCATTGCATATGGAGATTTCCCACAAGACTAGATTAAAGGATTTCAAAACCATAAACCCTCAGAAATTCAATGTTTTTGTCAATGGGAGAGAGGGACAATCAGGTGAAGAAATACTAAGGCTGGGAGCCTTCAATGTATTGCTGAAGAATTCTCTACCAAAAGAGTACCACTATTTTAAAGCAGATGAAGAGAAATATGAATCAACTTATGAAGCATTTAGGGCTTGTTTTCCAAGAGGGTTTGCATGGGAAATTATTGAGGTTTATTCAGGCCCTCCTTTGATTGCCTTCAAGTTTAGGCATTGGGGCTTCTTTGAAGGACCTTATAAAGATCATTCCCCAACTGGTGAATTGATTCAATTCTATGGCTTGGGAACTTTCAAGGTTGAAGAAGTTGATATCTACTATGATCCAGCTGAGTTATTTGGAGGTCTTTTAAATGGGAAAAAAACTGCTTCACAATCCAAAACCCAACACAACAATGACAAACATTTAGCTGATTCAGTTGCCACCTGCCCATTCTCCAAACTCAACATCTAG MSTKETIVAADKYRAFLDLEDSTIQWRHGKPPSFQTVNKLFEDGRTKVWPKGSLEETLQNIVKSLHMEISHKTRLKDFKTINPQKFNVFVNGREGQSGEEILRLGAFNVLLKNSLPKEYHYFKADEEKYESTYEAFRACFPRGFAWEIIEVYSGPPLIAFKFRHWGFFEGPYKDHSPTGELIQFYGLGTFKVEEVDIYYDPAELFGGLLNGKKTASQSKTQHNNDKHLADSVATCPFSKLNI Homology
BLAST of Tan0002871 vs. ExPASy Swiss-Prot
Match: P16273 (Pathogen-related protein OS=Hordeum vulgare OX=4513 PE=2 SV=2) HSP 1 Score: 189.1 bits (479), Expect = 5.8e-47 Identity = 90/199 (45.23%), Postives = 129/199 (64.82%), Query Frame = 0
BLAST of Tan0002871 vs. NCBI nr
Match: XP_038904395.1 (pathogen-related protein-like [Benincasa hispida]) HSP 1 Score: 380.9 bits (977), Expect = 7.9e-102 Identity = 178/246 (72.36%), Postives = 208/246 (84.55%), Query Frame = 0
BLAST of Tan0002871 vs. NCBI nr
Match: XP_038904524.1 (pathogen-related protein-like [Benincasa hispida]) HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100 Identity = 174/245 (71.02%), Postives = 204/245 (83.27%), Query Frame = 0
BLAST of Tan0002871 vs. NCBI nr
Match: XP_022142928.1 (pathogen-related protein-like [Momordica charantia]) HSP 1 Score: 366.3 bits (939), Expect = 2.0e-97 Identity = 172/238 (72.27%), Postives = 202/238 (84.87%), Query Frame = 0
BLAST of Tan0002871 vs. NCBI nr
Match: XP_023516553.1 (pathogen-related protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 358.6 bits (919), Expect = 4.2e-95 Identity = 170/245 (69.39%), Postives = 199/245 (81.22%), Query Frame = 0
BLAST of Tan0002871 vs. NCBI nr
Match: XP_022942368.1 (pathogen-related protein [Cucurbita moschata] >KAG6600504.1 hypothetical protein SDJN03_05737, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 356.7 bits (914), Expect = 1.6e-94 Identity = 168/238 (70.59%), Postives = 195/238 (81.93%), Query Frame = 0
BLAST of Tan0002871 vs. ExPASy TrEMBL
Match: A0A6J1CPH1 (pathogen-related protein-like OS=Momordica charantia OX=3673 GN=LOC111012921 PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 9.8e-98 Identity = 172/238 (72.27%), Postives = 202/238 (84.87%), Query Frame = 0
BLAST of Tan0002871 vs. ExPASy TrEMBL
Match: A0A6J1FUM9 (pathogen-related protein OS=Cucurbita moschata OX=3662 GN=LOC111447433 PE=4 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 7.7e-95 Identity = 168/238 (70.59%), Postives = 195/238 (81.93%), Query Frame = 0
BLAST of Tan0002871 vs. ExPASy TrEMBL
Match: A0A6J1J4T6 (pathogen-related protein-like OS=Cucurbita maxima OX=3661 GN=LOC111481259 PE=4 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 6.6e-94 Identity = 166/238 (69.75%), Postives = 195/238 (81.93%), Query Frame = 0
BLAST of Tan0002871 vs. ExPASy TrEMBL
Match: A0A6J1EYN7 (pathogen-related protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437625 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 2.8e-92 Identity = 163/245 (66.53%), Postives = 194/245 (79.18%), Query Frame = 0
BLAST of Tan0002871 vs. ExPASy TrEMBL
Match: A0A6J1JAH5 (pathogen-related protein-like OS=Cucurbita maxima OX=3661 GN=LOC111483209 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 3.6e-92 Identity = 163/246 (66.26%), Postives = 196/246 (79.67%), Query Frame = 0
BLAST of Tan0002871 vs. TAIR 10
Match: AT1G78780.2 (pathogenesis-related family protein ) HSP 1 Score: 306.2 bits (783), Expect = 2.3e-83 Identity = 144/244 (59.02%), Postives = 186/244 (76.23%), Query Frame = 0
BLAST of Tan0002871 vs. TAIR 10
Match: AT1G78780.4 (pathogenesis-related family protein ) HSP 1 Score: 294.7 bits (753), Expect = 7.0e-80 Identity = 141/244 (57.79%), Postives = 183/244 (75.00%), Query Frame = 0
BLAST of Tan0002871 vs. TAIR 10
Match: AT1G78780.1 (pathogenesis-related family protein ) HSP 1 Score: 234.6 bits (597), Expect = 8.5e-62 Identity = 109/178 (61.24%), Postives = 137/178 (76.97%), Query Frame = 0
BLAST of Tan0002871 vs. TAIR 10
Match: AT1G78780.3 (pathogenesis-related family protein ) HSP 1 Score: 234.6 bits (597), Expect = 8.5e-62 Identity = 109/178 (61.24%), Postives = 137/178 (76.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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