Tan0002549 (gene) Snake gourd v1

Overview


Name	Tan0002549
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Calcium-binding EF-hand family protein
Location	LG05: 6441636 .. 6442301 (+)
RNA-Seq Expression	Tan0002549
Synteny	Tan0002549

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGTCTTTTCTTTCTTTTCACCTTTATAAATTAAAGTTTCAAAATCCTCATCCCATTATAACAAAATTTTGGTGTGGTTTTGTGTTAATTAATGGCGAGAAAGGGGGCTGATTTCCAGGATTTGCTGCCGGTAATGGCAGAGAAATTAGGGGGAGAAGGGCTGATAAACGAGCTGTGTAATGGGTTTCAGCTGCTGATGGACAAGGACAAGGGCGTCATCACCTTGGACAGTCTGAGGAGAAACTCTTCGCTTTTGGGTCTTCGAGACATGGGAGAGGAGGAGCTTCTCAGCATGATGAGAGAGGGTGATTTGGATGGCGATGGCGCTTTGAATCAGATGGAGTTTTGTGTTTTGATGTTTAGATTAAGCCCTCAGCTGATGGATGAGTCTTTGTATTGGCTTCACCATGCTTTCGACAACGACTTTAATTAACACCCTCCTCTTTTCCAAAGAAAGCTATATGCGACGGCCATGCCTTGCCTACTTTAATGAAATGACGTCGTTTTGAAGCGACGAATTTTAATTTGCGTTTCCAATTATTAATTCCCTACCGTCTCTCTGCTATTCTATTCTAAATTTCTATGTCCATAAACTCCAAGAATTACAGAAAATAAAGGAATGCCGAACAGTTTATTATTTTACTCTCTTTTTTCTTCTCTCTGCC

mRNA sequence

TCCGTCTTTTCTTTCTTTTCACCTTTATAAATTAAAGTTTCAAAATCCTCATCCCATTATAACAAAATTTTGGTGTGGTTTTGTGTTAATTAATGGCGAGAAAGGGGGCTGATTTCCAGGATTTGCTGCCGGTAATGGCAGAGAAATTAGGGGGAGAAGGGCTGATAAACGAGCTGTGTAATGGGTTTCAGCTGCTGATGGACAAGGACAAGGGCGTCATCACCTTGGACAGTCTGAGGAGAAACTCTTCGCTTTTGGGTCTTCGAGACATGGGAGAGGAGGAGCTTCTCAGCATGATGAGAGAGGGTGATTTGGATGGCGATGGCGCTTTGAATCAGATGGAGTTTTGTGTTTTGATGTTTAGATTAAGCCCTCAGCTGATGGATGAGTCTTTGTATTGGCTTCACCATGCTTTCGACAACGACTTTAATTAACACCCTCCTCTTTTCCAAAGAAAGCTATATGCGACGGCCATGCCTTGCCTACTTTAATGAAATGACGTCGTTTTGAAGCGACGAATTTTAATTTGCGTTTCCAATTATTAATTCCCTACCGTCTCTCTGCTATTCTATTCTAAATTTCTATGTCCATAAACTCCAAGAATTACAGAAAATAAAGGAATGCCGAACAGTTTATTATTTTACTCTCTTTTTTCTTCTCTCTGCC

Coding sequence (CDS)

ATGGCGAGAAAGGGGGCTGATTTCCAGGATTTGCTGCCGGTAATGGCAGAGAAATTAGGGGGAGAAGGGCTGATAAACGAGCTGTGTAATGGGTTTCAGCTGCTGATGGACAAGGACAAGGGCGTCATCACCTTGGACAGTCTGAGGAGAAACTCTTCGCTTTTGGGTCTTCGAGACATGGGAGAGGAGGAGCTTCTCAGCATGATGAGAGAGGGTGATTTGGATGGCGATGGCGCTTTGAATCAGATGGAGTTTTGTGTTTTGATGTTTAGATTAAGCCCTCAGCTGATGGATGAGTCTTTGTATTGGCTTCACCATGCTTTCGACAACGACTTTAATTAA

Protein sequence

MARKGADFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSLLGLRDMGEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDNDFN

Homology

[Close]

BLAST of Tan0002549 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.0e-30
Identity = 66/106 (62.26%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 8   FQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRN-SSLLGLRDMGEEELL 67
           FQD  P MA KLGGEGLI E+C GF+LLMDKDKGVIT +SLRRN S++LGL D+ ++++ 
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 68  SMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDNDF 113
            M+ EGD D DGALNQMEFCVLMFRLSP+LM+ S   +    + +F
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of Tan0002549 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.3e-30
Identity = 65/107 (60.75%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 7   DFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRN-SSLLGLRDMGEEEL 66
           +F D LP MA  LGGEGLI ELCNGF+LLMD++KGVIT +SLRRN +++LGL D+ +E++
Sbjct: 18  NFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDV 77

Query: 67  LSMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDNDF 113
             M++EGD D DGALNQMEFCVLMFRLSP LM+ S   +    + +F
Sbjct: 78  RCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]

BLAST of Tan0002549 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 4.8e-28
Identity = 57/104 (54.81%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 8   FQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSLLGLRDMGEEELLS 67
           ++D+LPVMAEK+  E  ++ELC GF LL D ++ +IT +SLRRNS +LG+  M +E+   
Sbjct: 22  YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81

Query: 68  MMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDND 112
           M+REGDLDGDGALNQ EFCVLM RLSP++M+++  WL  A   +
Sbjct: 82  MVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

[Close]

BLAST of Tan0002549 vs. ExPASy Swiss-Prot
Match: Q2TBN3 (Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.2e-08
Identity = 31/87 (35.63%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 7   DFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSLLGLRDMGEEELL 66
           +F D L VM +K+  +    E+   F+L  D + G I+  +L+R +  LG  ++ +EEL 
Sbjct: 85  NFSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLSDEELQ 144

Query: 67  SMMREGDLDGDGALNQMEFCVLMFRLS 94
            M+ E D DGDG +N+ EF  +M + S
Sbjct: 145 EMIDEADRDGDGEVNEQEFLRIMKKTS 170

[Close]

BLAST of Tan0002549 vs. ExPASy Swiss-Prot
Match: Q06827 (Caltractin OS=Scherffelia dubia OX=3190 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 9.4e-08
Identity = 32/87 (36.78%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 7   DFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSLLGLRDMGEEELL 66
           DF++ L +M  K+G      E+   F+L  D + G I+  +L+R +  LG  +M +EEL 
Sbjct: 81  DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELG-ENMTDEELQ 140

Query: 67  SMMREGDLDGDGALNQMEFCVLMFRLS 94
            M+ E D DGDG +N+ EF  +M + S
Sbjct: 141 EMIDEADRDGDGEVNEEEFFRIMKKTS 166

[Close]

BLAST of Tan0002549 vs. NCBI nr
Match: KAG6570861.1 (Calcium-binding protein KRP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 192.2 bits (487), Expect = 2.4e-45
Identity = 96/115 (83.48%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 1   MARK---GADFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSLLGL 60
           MARK   G  F DLLPVMAEKLGGEGLINELCNGFQ+LMDK+KGVITL+SLRRNSSLLGL
Sbjct: 1   MARKGGGGGGFHDLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRRNSSLLGL 60

Query: 61  RDMGEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDNDF 113
            DMGEEEL+SMMREGDLDGDGALNQMEFCVLMFRLSP+LM+ESLYWL  A + +F
Sbjct: 61  WDMGEEELVSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEF 115

[Close]

BLAST of Tan0002549 vs. NCBI nr
Match: XP_023533208.1 (calcium-binding protein PBP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191.4 bits (485), Expect = 4.2e-45
Identity = 96/112 (85.71%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 1   MARKGADFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSLLGLRDM 60
           MARK A F DLLPVMAE+LGGEGLINELCNGFQLLMDK+KGVITLDSLR NSSLLGLRDM
Sbjct: 1   MARKSAAFHDLLPVMAEQLGGEGLINELCNGFQLLMDKEKGVITLDSLRLNSSLLGLRDM 60

Query: 61  GEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDNDF 113
           GE ELLSMM EGDLDGDGALNQMEFCVLMFRLSP+LM+ SL +L HAF N F
Sbjct: 61  GEAELLSMMTEGDLDGDGALNQMEFCVLMFRLSPELMEHSLSFLQHAFHNQF 112

[Close]

BLAST of Tan0002549 vs. NCBI nr
Match: XP_022944617.1 (calcium-binding protein PBP1-like [Cucurbita moschata] >KAG7010710.1 Calcium-binding protein PBP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.0 bits (484), Expect = 5.4e-45
Identity = 96/118 (81.36%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 1   MARK------GADFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSL 60
           MARK      G  F DLLPVMAEKLGGEGLINELCNGFQ+LMDK+KGVITL+SLRRNSSL
Sbjct: 1   MARKGGGGGGGGGFHDLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRRNSSL 60

Query: 61  LGLRDMGEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDNDF 113
           LGL DMGEEEL+SMMREGDLDGDGALNQMEFCVLMFRLSP+LM+ESLYWL  A + +F
Sbjct: 61  LGLWDMGEEELVSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEF 118

[Close]

BLAST of Tan0002549 vs. NCBI nr
Match: XP_022986403.1 (calcium-binding protein PBP1-like [Cucurbita maxima])

HSP 1 Score: 190.7 bits (483), Expect = 7.1e-45
Identity = 96/119 (80.67%), Postives = 104/119 (87.39%), Query Frame = 0


Query: 1   MARK-------GADFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSS 60
           MARK       G  F DLLPVMAEKLGGEGLINELCNGFQ+LMDK+KGVITL+SLRRNSS
Sbjct: 1   MARKGGGGGGGGGGFHDLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRRNSS 60

Query: 61  LLGLRDMGEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDNDF 113
           LLGL DMGEEEL+SMMREGDLDGDGALNQMEFCVLMFRLSP+LM+ESLYWL  A + +F
Sbjct: 61  LLGLWDMGEEELVSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEF 119

[Close]

BLAST of Tan0002549 vs. NCBI nr
Match: XP_023512862.1 (calcium-binding protein PBP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 95/115 (82.61%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 1   MARK---GADFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSLLGL 60
           MARK   G  F DLLPVMAEKLGGEGLINELCNGFQ+LMDK+KGVITL+SLR NSSLLGL
Sbjct: 1   MARKGGGGGGFHDLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRTNSSLLGL 60

Query: 61  RDMGEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDNDF 113
            DMGEEEL+SMMREGDLDGDGALNQMEFCVLMFRLSP+LM+ESLYWL  A + +F
Sbjct: 61  WDMGEEELVSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEF 115

[Close]

BLAST of Tan0002549 vs. ExPASy TrEMBL
Match: A0A6J1FW37 (calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111449023 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.6e-45
Identity = 96/118 (81.36%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 1   MARK------GADFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSL 60
           MARK      G  F DLLPVMAEKLGGEGLINELCNGFQ+LMDK+KGVITL+SLRRNSSL
Sbjct: 1   MARKGGGGGGGGGFHDLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRRNSSL 60

Query: 61  LGLRDMGEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDNDF 113
           LGL DMGEEEL+SMMREGDLDGDGALNQMEFCVLMFRLSP+LM+ESLYWL  A + +F
Sbjct: 61  LGLWDMGEEELVSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEF 118

[Close]

BLAST of Tan0002549 vs. ExPASy TrEMBL
Match: A0A6J1JGE3 (calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111484150 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.4e-45
Identity = 96/119 (80.67%), Postives = 104/119 (87.39%), Query Frame = 0


Query: 1   MARK-------GADFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSS 60
           MARK       G  F DLLPVMAEKLGGEGLINELCNGFQ+LMDK+KGVITL+SLRRNSS
Sbjct: 1   MARKGGGGGGGGGGFHDLLPVMAEKLGGEGLINELCNGFQMLMDKEKGVITLESLRRNSS 60

Query: 61  LLGLRDMGEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDNDF 113
           LLGL DMGEEEL+SMMREGDLDGDGALNQMEFCVLMFRLSP+LM+ESLYWL  A + +F
Sbjct: 61  LLGLWDMGEEELVSMMREGDLDGDGALNQMEFCVLMFRLSPELMEESLYWLDDALEKEF 119

[Close]

BLAST of Tan0002549 vs. ExPASy TrEMBL
Match: A0A6J1G6H5 (calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111451279 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.6e-45
Identity = 95/110 (86.36%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 1   MARKGADFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSLLGLRDM 60
           MARK A F DLLPVMAE+LGGEGLINELCNGFQLLMDK+KGVITLDSLR NSSLLGLRDM
Sbjct: 1   MARKSAAFHDLLPVMAEQLGGEGLINELCNGFQLLMDKEKGVITLDSLRLNSSLLGLRDM 60

Query: 61  GEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDN 111
           GE ELLSMM EGDLDGDGALNQMEFCVLMFRLSP+LM+ SL +L HAF N
Sbjct: 61  GEAELLSMMTEGDLDGDGALNQMEFCVLMFRLSPELMEHSLSFLQHAFHN 110

[Close]

BLAST of Tan0002549 vs. ExPASy TrEMBL
Match: A0A6J1HZZ8 (calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111469641 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.2e-44
Identity = 95/112 (84.82%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MARKGADFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSLLGLRDM 60
           MARK A F DLLPVMAE+LGGEGLINELCNGFQLLMDK+KGVITLDSLR NSSLLGLRDM
Sbjct: 1   MARKSAAFHDLLPVMAEQLGGEGLINELCNGFQLLMDKEKGVITLDSLRLNSSLLGLRDM 60

Query: 61  GEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDNDF 113
           GE ELLSMM EGDLDGDGALNQMEFCVLMFRLSP+LM  SLY L HA  + F
Sbjct: 61  GEAELLSMMTEGDLDGDGALNQMEFCVLMFRLSPELMQHSLYCLQHASHHQF 112

[Close]

BLAST of Tan0002549 vs. ExPASy TrEMBL
Match: A0A0A0KCV2 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G120930 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.9e-44
Identity = 93/113 (82.30%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 1   MARK-GADFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSLLGLRD 60
           M++K GA+FQDLLPVMAEKLGGEGLI ELCNGF++LMDK+KGVITL+SLRRNS LLG+RD
Sbjct: 1   MSKKGGANFQDLLPVMAEKLGGEGLIKELCNGFEVLMDKEKGVITLESLRRNSWLLGVRD 60

Query: 61  MGEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDNDF 113
           M EEELLSMMREGDLDGDGALNQMEFCVLMFRLSP LM  SLYWL  A +N+F
Sbjct: 61  MAEEELLSMMREGDLDGDGALNQMEFCVLMFRLSPDLMQHSLYWLQLALENEF 113

[Close]

BLAST of Tan0002549 vs. TAIR 10
Match: AT5G54490.1 (pinoid-binding protein 1 )

HSP 1 Score: 134.0 bits (336), Expect = 7.3e-32
Identity = 66/106 (62.26%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 8   FQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRN-SSLLGLRDMGEEELL 67
           FQD  P MA KLGGEGLI E+C GF+LLMDKDKGVIT +SLRRN S++LGL D+ ++++ 
Sbjct: 19  FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVR 78

Query: 68  SMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDNDF 113
            M+ EGD D DGALNQMEFCVLMFRLSP+LM+ S   +    + +F
Sbjct: 79  YMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124

[Close]

BLAST of Tan0002549 vs. TAIR 10
Match: AT4G27280.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 132.9 bits (333), Expect = 1.6e-31
Identity = 65/107 (60.75%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 7   DFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRN-SSLLGLRDMGEEEL 66
           +F D LP MA  LGGEGLI ELCNGF+LLMD++KGVIT +SLRRN +++LGL D+ +E++
Sbjct: 18  NFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDV 77

Query: 67  LSMMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDNDF 113
             M++EGD D DGALNQMEFCVLMFRLSP LM+ S   +    + +F
Sbjct: 78  RCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124

[Close]

BLAST of Tan0002549 vs. TAIR 10
Match: AT2G46600.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 125.2 bits (313), Expect = 3.4e-29
Identity = 57/104 (54.81%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 8   FQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSLLGLRDMGEEELLS 67
           ++D+LPVMAEK+  E  ++ELC GF LL D ++ +IT +SLRRNS +LG+  M +E+   
Sbjct: 22  YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81

Query: 68  MMREGDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDND 112
           M+REGDLDGDGALNQ EFCVLM RLSP++M+++  WL  A   +
Sbjct: 82  MVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125

[Close]

BLAST of Tan0002549 vs. TAIR 10
Match: AT4G23650.1 (calcium-dependent protein kinase 6 )

HSP 1 Score: 53.9 bits (128), Expect = 9.6e-08
Identity = 33/100 (33.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 12  LPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSLLGLRDMGEEELLSMMRE 71
           L V+AE L  E +I  L   F+ L   + G++TL+ LR     LG + + E E+  +M  
Sbjct: 369 LKVIAENLSEEEIIG-LKEMFKSLDTDNNGIVTLEELRTGLPKLGSK-ISEAEIRQLMEA 428

Query: 72  GDLDGDGALNQMEFCVLMFRLSPQLMDESLYWLHHAFDND 112
            D+DGDG+++ +EF      ++    ++ LY     FDND
Sbjct: 429 ADMDGDGSIDYLEFISATMHMNRIEREDHLYTAFQFFDND 466

[Close]

BLAST of Tan0002549 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 )

HSP 1 Score: 48.9 bits (115), Expect = 3.1e-06
Identity = 29/83 (34.94%), Postives = 44/83 (53.01%), Query Frame = 0


Query: 7   DFQDLLPVMAEKLGGEGLINELCNGFQLLMDKDKGVITLDSLRRNSSLLGLRDMGEEELL 66
           DF + L +MA+K+       EL   F++      G I+   LR   + LG   + +EE+ 
Sbjct: 65  DFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVE 124

Query: 67  SMMREGDLDGDGALNQMEFCVLM 90
            M+RE D+DGDG +N  EF  +M
Sbjct: 125 EMIREADVDGDGQINYEEFVKIM 146

The following BLAST results are available for this feature:

BLAST of Tan0002549 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSQ6	1.0e-30	62.26	Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1	[more]
O81831	2.3e-30	60.75	Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1	[more]
Q9ZPX9	4.8e-28	54.81	Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2	[more]
Q2TBN3	7.2e-08	35.63	Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1	[more]
Q06827	9.4e-08	36.78	Caltractin OS=Scherffelia dubia OX=3190 PE=1 SV=1	[more]

BLAST of Tan0002549 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570861.1	2.4e-45	83.48	Calcium-binding protein KRP1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023533208.1	4.2e-45	85.71	calcium-binding protein PBP1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022944617.1	5.4e-45	81.36	calcium-binding protein PBP1-like [Cucurbita moschata] >KAG7010710.1 Calcium-bin...	[more]
XP_022986403.1	7.1e-45	80.67	calcium-binding protein PBP1-like [Cucurbita maxima]	[more]
XP_023512862.1	1.2e-44	82.61	calcium-binding protein PBP1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0002549 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FW37	2.6e-45	81.36	calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111449023 ...	[more]
A0A6J1JGE3	3.4e-45	80.67	calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111484150 PE...	[more]
A0A6J1G6H5	7.6e-45	86.36	calcium-binding protein PBP1-like OS=Cucurbita moschata OX=3662 GN=LOC111451279 ...	[more]
A0A6J1HZZ8	2.2e-44	84.82	calcium-binding protein PBP1-like OS=Cucurbita maxima OX=3661 GN=LOC111469641 PE...	[more]
A0A0A0KCV2	2.9e-44	82.30	EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G120930 PE=...	[more]

BLAST of Tan0002549 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54490.1	7.3e-32	62.26	pinoid-binding protein 1	[more]
AT4G27280.1	1.6e-31	60.75	Calcium-binding EF-hand family protein	[more]
AT2G46600.1	3.4e-29	54.81	Calcium-binding EF-hand family protein	[more]
AT4G23650.1	9.6e-08	33.00	calcium-dependent protein kinase 6	[more]
AT1G66410.1	3.1e-06	34.94	calmodulin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 64..92 e-value: 0.0012 score: 28.1
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 40..91 e-value: 1.7E-18 score: 66.2
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 60..95 score: 10.133827
None	No IPR available	GENE3D	1.10.238.10		coord: 5..113 e-value: 3.2E-21 score: 77.4
None	No IPR available	PANTHER	PTHR47319:SF8	CALCIUM-BINDING PROTEIN PBP1-LIKE	coord: 2..112
IPR044205	Calcium-binding protein KIC/PBP1/KRP1	PANTHER	PTHR47319	CALCIUM-BINDING PROTEIN KIC	coord: 2..112
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 73..85
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 24..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0002549.1	Tan0002549.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding